RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 PAWRQ96IZ0 340 aaKnown RBP31.11■■■□□ 2.57
VEGFA-207ENST00000413642 MMP19Q99542 508 aa31.11■■■□□ 2.57
VEGFA-207ENST00000413642 RAVER2Q9HCJ3 691 aaKnown RBP31.11■■■□□ 2.57
VEGFA-207ENST00000413642 NEDD4P46934 1319 aa31.1■■■□□ 2.57
VEGFA-207ENST00000413642 ZBED4O75132 1171 aa31.1■■■□□ 2.57
VEGFA-207ENST00000413642 PGK2P07205 417 aa31.1■■■□□ 2.57
VEGFA-207ENST00000413642 SLC1A4P43007 532 aa31.1■■■□□ 2.57
VEGFA-207ENST00000413642 MNX1P50219 401 aaPredicted RBP31.1■■■□□ 2.57
VEGFA-207ENST00000413642 SNRNP48Q6IEG0 339 aaKnown RBP31.1■■■□□ 2.57
VEGFA-207ENST00000413642 KCTD1Q719H9 257 aa31.1■■■□□ 2.57
VEGFA-207ENST00000413642 ABRAQ8N0Z2 381 aa31.1■■■□□ 2.57
VEGFA-207ENST00000413642 MKI67P46013 3256 aaKnown RBP31.09■■■□□ 2.57
VEGFA-207ENST00000413642 ZNF213O14771 459 aa31.09■■■□□ 2.57
VEGFA-207ENST00000413642 PPP4R3BQ5MIZ7 849 aa31.09■■■□□ 2.57
VEGFA-207ENST00000413642 LHX8Q68G74 356 aa31.09■■■□□ 2.57
VEGFA-207ENST00000413642 DPF3Q92784 378 aa31.09■■■□□ 2.57
VEGFA-207ENST00000413642 TEX13BQ9BXU2 312 aa31.09■■■□□ 2.57
VEGFA-207ENST00000413642 SLC38A10Q9HBR0 1119 aa31.09■■■□□ 2.57
VEGFA-207ENST00000413642 OGDHLQ9ULD0 1010 aa31.09■■■□□ 2.57
VEGFA-207ENST00000413642 TMEM47Q9BQJ4 181 aa31.08■■■□□ 2.57
VEGFA-207ENST00000413642 DSCC1Q9BVC3 393 aa31.08■■■□□ 2.57
VEGFA-207ENST00000413642 CTDP1Q9Y5B0 961 aaPredicted RBP31.08■■■□□ 2.57
VEGFA-207ENST00000413642 MYH4Q9Y623 1939 aa31.08■■■□□ 2.57
VEGFA-207ENST00000413642 KCTD2Q14681 263 aa31.07■■■□□ 2.56
VEGFA-207ENST00000413642 OLFML2BQ68BL8 750 aa31.07■■■□□ 2.56
VEGFA-207ENST00000413642 TCP11L1Q9NUJ3 509 aa31.07■■■□□ 2.56
VEGFA-207ENST00000413642 CHMLP26374 656 aa31.06■■■□□ 2.56
VEGFA-207ENST00000413642 CNGA1P29973 690 aa31.06■■■□□ 2.56
VEGFA-207ENST00000413642 SNAP25P60880 206 aa31.06■■■□□ 2.56
VEGFA-207ENST00000413642 PRAMEF19Q5SWL8 479 aa31.06■■■□□ 2.56
VEGFA-207ENST00000413642 RCSD1Q6JBY9 416 aa31.06■■■□□ 2.56
VEGFA-207ENST00000413642 SKAP1Q86WV1 359 aa31.06■■■□□ 2.56
VEGFA-207ENST00000413642 MAML3Q96JK9 1138 aa31.06■■■□□ 2.56
VEGFA-207ENST00000413642 ZKSCAN3Q9BRR0 538 aa31.06■■■□□ 2.56
VEGFA-207ENST00000413642 COL11A1P12107 1806 aaPredicted RBP31.05■■■□□ 2.56
VEGFA-207ENST00000413642 ATP2A1O14983 1001 aa31.05■■■□□ 2.56
VEGFA-207ENST00000413642 STAT2P52630 851 aa31.05■■■□□ 2.56
VEGFA-207ENST00000413642 IKQ13123 557 aaPredicted RBP31.05■■■□□ 2.56
VEGFA-207ENST00000413642 RNF41Q9H4P4 317 aaPredicted RBP31.05■■■□□ 2.56
VEGFA-207ENST00000413642 SLC5A4Q9NY91 659 aa31.05■■■□□ 2.56
VEGFA-207ENST00000413642 ZNF236Q9UL36 1845 aa31.04■■■□□ 2.56
VEGFA-207ENST00000413642 H0YGN5 161 aa31.04■■■□□ 2.56
VEGFA-207ENST00000413642 TOP1P11387 765 aaKnown RBP31.04■■■□□ 2.56
VEGFA-207ENST00000413642 CYBAP13498 195 aa31.04■■■□□ 2.56
VEGFA-207ENST00000413642 CAPN2P17655 700 aa31.04■■■□□ 2.56
VEGFA-207ENST00000413642 COPB2P35606 906 aa31.04■■■□□ 2.56
VEGFA-207ENST00000413642 ZNF792Q3KQV3 632 aa31.04■■■□□ 2.56
VEGFA-207ENST00000413642 TTBK2Q6IQ55 1244 aa31.04■■■□□ 2.56
VEGFA-207ENST00000413642 ANKLE1Q8NAG6 615 aa31.04■■■□□ 2.56
VEGFA-207ENST00000413642 CHURC1Q8WUH1 139 aa31.04■■■□□ 2.56
VEGFA-207ENST00000413642 HTATIP2Q9BUP3 242 aa31.04■■■□□ 2.56
VEGFA-207ENST00000413642 PCP11498 1178 aaKnown RBP31.03■■■□□ 2.56
VEGFA-207ENST00000413642 CCDC96Q2M329 555 aa31.03■■■□□ 2.56
VEGFA-207ENST00000413642 NECAB2Q7Z6G3 386 aa31.03■■■□□ 2.56
VEGFA-207ENST00000413642 FAM160B2Q86V87 743 aa31.03■■■□□ 2.56
VEGFA-207ENST00000413642 ESR2Q92731 530 aa31.02■■■□□ 2.56
VEGFA-207ENST00000413642 AGBL1Q96MI9 1066 aa31.02■■■□□ 2.56
VEGFA-207ENST00000413642 DDX20Q9UHI6 824 aaKnown RBP31.02■■■□□ 2.56
VEGFA-207ENST00000413642 PRR12Q9ULL5 1215 aa31.02■■■□□ 2.56
VEGFA-207ENST00000413642 ZNF536O15090 1300 aa31.01■■■□□ 2.56
VEGFA-207ENST00000413642 B4E1Z4 1266 aa31.01■■■□□ 2.55
VEGFA-207ENST00000413642 KDM4AO75164 1064 aa31.01■■■□□ 2.55
VEGFA-207ENST00000413642 IMMTQ16891 758 aaKnown RBP31.01■■■□□ 2.55
VEGFA-207ENST00000413642 DCAF4Q8WV16 495 aa31.01■■■□□ 2.55
VEGFA-207ENST00000413642 CTNNA3Q9UI47 895 aa31.01■■■□□ 2.55
VEGFA-207ENST00000413642 FRMPD2Q68DX3 1309 aaPredicted RBP31■■■□□ 2.55
VEGFA-207ENST00000413642 PLA2G6O60733 806 aa31■■■□□ 2.55
VEGFA-207ENST00000413642 SLC16A2P36021 539 aa31■■■□□ 2.55
VEGFA-207ENST00000413642 PTH1RQ03431 593 aa31■■■□□ 2.55
VEGFA-207ENST00000413642 ANO1Q5XXA6 986 aa31■■■□□ 2.55
VEGFA-207ENST00000413642 CCDC174Q6PII3 467 aa31■■■□□ 2.55
VEGFA-207ENST00000413642 GPCPD1Q9NPB8 672 aa31■■■□□ 2.55
VEGFA-207ENST00000413642 HOMER2Q9NSB8 354 aa31■■■□□ 2.55
VEGFA-207ENST00000413642 TAL1P17542 331 aaPredicted RBP30.99■■■□□ 2.55
VEGFA-207ENST00000413642 OAZ1P54368 228 aa30.99■■■□□ 2.55
VEGFA-207ENST00000413642 DDX11Q96FC9 970 aa30.99■■■□□ 2.55
VEGFA-207ENST00000413642 C11orf49Q9H6J7 331 aa30.99■■■□□ 2.55
VEGFA-207ENST00000413642 RAD50Q92878 1312 aa30.98■■■□□ 2.55
VEGFA-207ENST00000413642 TTC14Q96N46 770 aa30.98■■■□□ 2.55
VEGFA-207ENST00000413642 FDX1P10109 184 aa30.97■■■□□ 2.55
VEGFA-207ENST00000413642 RUFY2Q8WXA3 655 aa30.97■■■□□ 2.55
VEGFA-207ENST00000413642 TINF2Q9BSI4 451 aa30.97■■■□□ 2.55
VEGFA-207ENST00000413642 DIS3Q9Y2L1 958 aaKnown RBP30.97■■■□□ 2.55
VEGFA-207ENST00000413642 DNAJC25-GNG10A0A024R161 153 aa30.96■■■□□ 2.55
VEGFA-207ENST00000413642 PDHBP11177 359 aa30.96■■■□□ 2.55
VEGFA-207ENST00000413642 CHST13Q8NET6 341 aa30.96■■■□□ 2.55
VEGFA-207ENST00000413642 ZSWIM5Q9P217 1185 aa30.96■■■□□ 2.55
VEGFA-207ENST00000413642 PFASO15067 1338 aa30.96■■■□□ 2.55
VEGFA-207ENST00000413642 ANKRD35Q8N283 1001 aa30.95■■■□□ 2.55
VEGFA-207ENST00000413642 RNF146Q9NTX7 359 aa30.95■■■□□ 2.55
VEGFA-207ENST00000413642 SGSM2O43147 1006 aa30.94■■■□□ 2.54
VEGFA-207ENST00000413642 SEPT4O43236 478 aa30.94■■■□□ 2.54
VEGFA-207ENST00000413642 EVI5O60447 810 aa30.94■■■□□ 2.54
VEGFA-207ENST00000413642 COL6A1P12109 1028 aa30.94■■■□□ 2.54
VEGFA-207ENST00000413642 ALAS1P13196 640 aa30.94■■■□□ 2.54
VEGFA-207ENST00000413642 BTNL9Q6UXG8 535 aa30.94■■■□□ 2.54
VEGFA-207ENST00000413642 DGKHQ86XP1 1220 aa30.94■■■□□ 2.54
VEGFA-207ENST00000413642 FBXO40Q9UH90 709 aa30.94■■■□□ 2.54
VEGFA-207ENST00000413642 MSCO60682 206 aa30.93■■■□□ 2.54
VEGFA-207ENST00000413642 SYDE2Q5VT97 1194 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms