RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 RPS6KB1P23443 525 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 KRT20P35900 424 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 PLA2G4AP47712 749 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 TDO2P48775 406 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 IDH3AP50213 366 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 ZNF131P52739 623 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 PSMC1P62191 440 aaKnown RBP6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 SUMO1P63165 101 aaKnown RBP6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 BTKQ06187 659 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 PPFIA1Q13136 1202 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 ZNF460Q14592 562 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 HIF1AQ16665 826 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 INAVAQ3KP66 663 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 PLA2G4EQ3MJ16 856 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 TRIM61Q5EBN2 209 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 YOD1Q5VVQ6 348 aaPredicted RBP6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 SPATA1Q5VX52 437 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 TLDC1Q6P9B6 456 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 BRINP3Q76B58 766 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 BRAPQ7Z569 592 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 GALNT5Q7Z7M9 940 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 LAPTM4BQ86VI4 370 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 SLFN12Q8IYM2 578 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 CMTR2Q8IYT2 770 aaKnown RBP6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 MYCT1Q8N699 235 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 SP7Q8TDD2 431 aaPredicted RBP6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 HDAC2Q92769 488 aaKnown RBP6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 NECAB3Q96P71 396 aaPredicted RBP6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 SLC26A6Q9BXS9 759 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 WDR12Q9GZL7 423 aaKnown RBP6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 RSAD1Q9HA92 442 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 AGO4Q9HCK5 861 aaKnown RBP6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 LRRC4BQ9NT99 713 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 GJD2Q9UKL4 321 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 DNM3Q9UQ16 869 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 SMARCA4P51532 1647 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 MRC2Q9UBG0 1479 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 A0A1W2PQU0 124 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 LRRC10BA6NIK2 292 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 SMTNL1A8MU46 457 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 M0R2C6 588 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 TPP1O14773 563 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 PLOD3O60568 738 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 IL2RAP01589 272 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 JMJD7P0C870 316 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 SCNN1BP51168 640 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 SNX16P57768 344 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 HSP90AA2PQ14568 343 aaPredicted RBP6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 TERF2Q15554 542 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 LRRFIP1Q32MZ4 808 aaKnown RBP6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 CFAP100Q494V2 611 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 KIAA1211LQ6NV74 962 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 VASH1Q7L8A9 365 aaPredicted RBP6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 FASTKD5Q7L8L6 764 aaKnown RBP6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 SRGAP1Q7Z6B7 1085 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 ZNF713Q8N859 430 aaPredicted RBP6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 LSMEM1Q8N8F7 131 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 DEPTORQ8TB45 409 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 SLC35G2Q8TBE7 412 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 HVCN1Q96D96 273 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 NUDT16L1Q9BRJ7 211 aaKnown RBP6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 AARSD1Q9BTE6 412 aaKnown RBP6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 ATP6V0A4Q9HBG4 840 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 ARFGAP3Q9NP61 516 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 LATS2Q9NRM7 1088 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 SNX5Q9Y5X3 404 aa6.87□□□□□ -1.31
CBX1P3-201ENST00000413296 A0A0G2JS52 829 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 PQBP1O60828 265 aaKnown RBP6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 ATE1O95260 518 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 ARIH2O95376 493 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 EDN3P14138 238 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 CES1P23141 567 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 HOXD12P35452 270 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 PEX19P40855 299 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 MMP14P50281 582 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 ARSDP51689 593 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 ERVK-21P61565 698 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 GRM1Q13255 1194 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 IFIT1BQ5T764 474 aaKnown RBP6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 IQCEQ6IPM2 695 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 NBPF10Q6P3W6 841 aaKnown RBP6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 B3GNT9Q6UX72 402 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 SPOCD1Q6ZMY3 1216 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 C11orf74Q86VG3 221 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 ANKRD18AQ8IVF6 992 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 TAB3Q8N5C8 712 aaPredicted RBP6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 ARL10Q8N8L6 244 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 LSM14AQ8ND56 463 aaKnown RBP6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 SLC7A14Q8TBB6 771 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 SEC62Q99442 399 aaKnown RBP6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 ANTXR1Q9H6X2 564 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 PHAXQ9H814 394 aaKnown RBP6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 LIN7BQ9HAP6 207 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 PDLIM7Q9NR12 457 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 NKIRAS2Q9NYR9 191 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 NDOR1Q9UHB4 597 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 CRYL1Q9Y2S2 319 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 RTCBQ9Y3I0 505 aaKnown RBP6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 KCNMB2Q9Y691 235 aa6.86□□□□□ -1.31
CBX1P3-201ENST00000413296 THOC2Q8NI27 1593 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms