RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 MOCS3O95396 460 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 GPTP24298 496 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 NBPF9Q3BBW0 867 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 CNNM4Q6P4Q7 775 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 ZNF654Q8IZM8 581 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 WHAMMQ8TF30 809 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 TRIM31Q9BZY9 425 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 ZNF532Q9HCE3 1301 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 METP08581 1390 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 CDC25AP30304 524 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 SATB1Q01826 763 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 ZNF658Q5TYW1 1059 aaPredicted RBP15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 MB21D1Q8N884 522 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 SEC63Q9UGP8 760 aaKnown RBP15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 TSPY2A6NKD2 308 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 PPP1R37O75864 691 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 GUCY1A3Q02108 690 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 PTGDRQ13258 359 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 MSL3Q8N5Y2 521 aaKnown RBP15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 EPN3Q9H201 632 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 RNF14Q9UBS8 474 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 TRMT112Q9UI30 125 aaKnown RBP15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 PRAMEF22A3QJZ6 481 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 CHGBP05060 677 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 IFNAR1P17181 557 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 CASP1P29466 404 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 GBP1P32455 592 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 IGHMBP2P38935 993 aaKnown RBP15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 LRRC24Q50LG9 513 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 FANCBQ8NB91 859 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 EEF2KMTQ96G04 330 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 PLCB1Q9NQ66 1216 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 PPP1R12BO60237 982 aaPredicted RBP15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 CYP7A1P22680 504 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 EVA1CP58658 441 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 EPHA10Q5JZY3 1008 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 SWT1Q5T5J6 900 aaKnown RBP15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 ARMT1Q9H993 441 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 STK38LQ9Y2H1 464 aa15.39■□□□□ 0.05
CLTCL1-201ENST00000412649 LUC7L3O95232 432 aaKnown RBP15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 DRP2Q13474 957 aa15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 SETDB1Q15047 1291 aa15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 MB21D2Q8IYB1 491 aaPredicted RBP15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 AATFQ9NY61 560 aaKnown RBP eCLIP15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 MAP2P11137 1827 aaKnown RBP15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 UBE4AQ14139 1066 aa15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 GLE1Q53GS7 698 aaKnown RBP15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 TEX11Q8IYF3 940 aa15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 SH2D3CQ8N5H7 860 aa15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 MIGA1Q8NAN2 632 aa15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 KCNK9Q9NPC2 374 aa15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 TTC26A0AVF1 554 aa15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 ZNF473Q8WTR7 871 aaKnown RBP15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 CD248Q9HCU0 757 aa15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 ITIH6Q6UXX5 1313 aa15.38■□□□□ 0.05
CLTCL1-201ENST00000412649 KCNK3O14649 394 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 GYPCP04921 128 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 INTS8Q75QN2 995 aaKnown RBP15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 CROCCP2Q86T23 111 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 CHP1Q99653 195 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 TRIM10Q9UDY6 481 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 MROH2AA6NES4 1674 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 CD163L1Q9NR16 1453 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 PSMD14O00487 310 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 RASSF7Q02833 373 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 TBX2Q13207 712 aaPredicted RBP15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 SFMBT2Q5VUG0 894 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 ZNF496Q96IT1 587 aaPredicted RBP15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 NLRC4Q9NPP4 1024 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 GMNCA6NCL1 334 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 GCFC2P16383 781 aaKnown RBP15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 HEATR3Q7Z4Q2 680 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 RUBCNQ92622 972 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 CNOT6LQ96LI5 555 aaKnown RBP15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 CCT8L2Q96SF2 557 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 PAIP2Q9BPZ3 127 aaKnown RBP15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 LRRC1Q9BTT6 524 aa15.37■□□□□ 0.05
CLTCL1-201ENST00000412649 IGKV5-2P06315 115 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 BIRC2Q13490 618 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 TSNAXIP1Q2TAA8 658 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 NUCKS1Q9H1E3 243 aaKnown RBP15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 MKNK2Q9HBH9 465 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 STRN4Q9NRL3 753 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 PLAAQ9Y263 795 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 LGALS16A8MUM7 142 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 HGSO14964 777 aaPredicted RBP15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 ZNF185O15231 689 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 HIP1RO75146 1068 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 LSP1P33241 339 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 UBA5Q9GZZ9 404 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 PUS7LQ9H0K6 701 aaKnown RBP15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 PCDHA13Q9Y5I0 950 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 MLH3Q9UHC1 1453 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 CDC42BPGQ6DT37 1551 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 ALKQ9UM73 1620 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 NRKQ7Z2Y5 1582 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 TNRQ92752 1358 aa15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 RGS16O15492 202 aaPredicted RBP15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 ACTN4O43707 911 aaKnown RBP15.36■□□□□ 0.05
CLTCL1-201ENST00000412649 AARSP49588 968 aaKnown RBP eCLIP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms