RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 DTHD1Q6ZMT9 781 aa15.06■□□□□ 0
COL6A2-204ENST00000409416 PAGE5Q96GU1 130 aa15.06■□□□□ 0
COL6A2-204ENST00000409416 KCPQ6ZWJ8 1503 aa15.06■□□□□ 0
COL6A2-204ENST00000409416 EFCAB8A8MWE9 144 aa15.06■□□□□ 0
COL6A2-204ENST00000409416 ACTN4O43707 911 aaKnown RBP15.06■□□□□ 0
COL6A2-204ENST00000409416 SORBS3O60504 671 aa15.06■□□□□ 0
COL6A2-204ENST00000409416 TRIM21P19474 475 aaKnown RBP15.06■□□□□ 0
COL6A2-204ENST00000409416 KIF5BP33176 963 aa15.06■□□□□ 0
COL6A2-204ENST00000409416 KIAA1328Q86T90 577 aa15.06■□□□□ 0
COL6A2-204ENST00000409416 NSUN4Q96CB9 384 aaKnown RBP15.06■□□□□ 0
COL6A2-204ENST00000409416 DEF6Q9H4E7 631 aa15.06■□□□□ 0
COL6A2-204ENST00000409416 CCDC66A2RUB6 948 aa15.05■□□□□ 0
COL6A2-204ENST00000409416 OAS2P29728 719 aaKnown RBP15.05■□□□□ 0
COL6A2-204ENST00000409416 MDM2Q00987 491 aaPredicted RBP15.05■□□□□ 0
COL6A2-204ENST00000409416 WWC2Q6AWC2 1192 aa15.05■□□□□ 0
COL6A2-204ENST00000409416 GOLGA1Q92805 767 aa15.05■□□□□ 0
COL6A2-204ENST00000409416 SRRTQ9BXP5 876 aaKnown RBP15.05■□□□□ 0
COL6A2-204ENST00000409416 PARD6BQ9BYG5 372 aa15.05■□□□□ 0
COL6A2-204ENST00000409416 TTF2Q9UNY4 1162 aaKnown RBP15.05■□□□□ 0
COL6A2-204ENST00000409416 BCS1LQ9Y276 419 aa15.05■□□□□ 0
COL6A2-204ENST00000409416 SPATA31A1Q5TZJ5 1347 aa15.05■□□□□ 0
COL6A2-204ENST00000409416 FGFR2P21802 821 aa15.05■□□□□ -0
COL6A2-204ENST00000409416 MYH15Q9Y2K3 1946 aa15.05■□□□□ -0
COL6A2-204ENST00000409416 SMCO2A6NFE2 343 aa15.05■□□□□ -0
COL6A2-204ENST00000409416 CHMP2AO43633 222 aa15.05■□□□□ -0
COL6A2-204ENST00000409416 IPO7O95373 1038 aaKnown RBP15.05■□□□□ -0
COL6A2-204ENST00000409416 GDF11O95390 407 aa15.05■□□□□ -0
COL6A2-204ENST00000409416 ALX1Q15699 326 aa15.05■□□□□ -0
COL6A2-204ENST00000409416 RAD9BQ6WBX8 426 aa15.05■□□□□ -0
COL6A2-204ENST00000409416 NELFBQ8WX92 580 aa15.05■□□□□ -0
COL6A2-204ENST00000409416 FAM207AQ9NSI2 230 aaPredicted RBP15.05■□□□□ -0
COL6A2-204ENST00000409416 PCDHAC2Q9Y5I4 1007 aa15.05■□□□□ -0
COL6A2-204ENST00000409416 STK36Q9NRP7 1315 aa15.05■□□□□ -0
COL6A2-204ENST00000409416 GOLGA6L9A6NEM1 432 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 PLA2G4AP47712 749 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 MED15Q96RN5 788 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 KRT9P35527 623 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 CHMP4BP1P59074 171 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 PDE4DQ08499 809 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 UBE4AQ14139 1066 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 SHROOM1Q2M3G4 852 aaPredicted RBP15.04■□□□□ -0
COL6A2-204ENST00000409416 TDRD12Q587J7 1177 aaKnown RBP15.04■□□□□ -0
COL6A2-204ENST00000409416 TMEM139Q8IV31 216 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 BSDC1Q9NW68 430 aaPredicted RBP15.04■□□□□ -0
COL6A2-204ENST00000409416 TCERG1LQ5VWI1 586 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 SPATA1Q5VX52 437 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 ZNF804AQ7Z570 1209 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 IQUBQ8NA54 791 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 TCP11L1Q9NUJ3 509 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 TRIM10Q9UDY6 481 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 ZBTB21Q9ULJ3 1066 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 ADAMTS7Q9UKP4 1686 aa15.04■□□□□ -0
COL6A2-204ENST00000409416 RTL9Q8NET4 1388 aa15.03■□□□□ -0
COL6A2-204ENST00000409416 TUBB4AP04350 444 aa15.03■□□□□ -0
COL6A2-204ENST00000409416 CALM1P0DP23 149 aa15.03■□□□□ -0
COL6A2-204ENST00000409416 CALM2P0DP24 149 aa15.03■□□□□ -0
COL6A2-204ENST00000409416 CALM3P0DP25 149 aa15.03■□□□□ -0
COL6A2-204ENST00000409416 CYP27A1Q02318 531 aa15.03■□□□□ -0
COL6A2-204ENST00000409416 CCDC84Q86UT8 332 aaPredicted RBP15.03■□□□□ -0
COL6A2-204ENST00000409416 BLIDQ8IZY5 108 aa15.03■□□□□ -0
COL6A2-204ENST00000409416 TMEM60Q9H2L4 133 aa15.03■□□□□ -0
COL6A2-204ENST00000409416 KCNQ5Q9NR82 932 aa15.03■□□□□ -0
COL6A2-204ENST00000409416 GGA1Q9UJY5 639 aa15.03■□□□□ -0
COL6A2-204ENST00000409416 ALS2Q96Q42 1657 aa15.03■□□□□ -0
COL6A2-204ENST00000409416 MYO5AQ9Y4I1 1855 aaKnown RBP15.03■□□□□ -0
COL6A2-204ENST00000409416 USP17L5A8MUK1 530 aa15.03■□□□□ -0
COL6A2-204ENST00000409416 SERPINB2P05120 415 aa15.03■□□□□ -0
COL6A2-204ENST00000409416 SMC1AQ14683 1233 aaKnown RBP15.03■□□□□ -0
COL6A2-204ENST00000409416 ZNF512BQ96KM6 892 aaPredicted RBP15.03■□□□□ -0
COL6A2-204ENST00000409416 DNAJC5Q9H3Z4 198 aa15.03■□□□□ -0
COL6A2-204ENST00000409416 KCNJ6P48051 423 aa15.02■□□□□ -0
COL6A2-204ENST00000409416 GPSM2P81274 684 aa15.02■□□□□ -0
COL6A2-204ENST00000409416 TTBK2Q6IQ55 1244 aa15.02■□□□□ -0
COL6A2-204ENST00000409416 VEZTQ9HBM0 779 aa15.02■□□□□ -0
COL6A2-204ENST00000409416 NLRC4Q9NPP4 1024 aa15.02■□□□□ -0
COL6A2-204ENST00000409416 POTEMA6NI47 508 aa15.02■□□□□ -0
COL6A2-204ENST00000409416 PARP1P09874 1014 aaKnown RBP15.02■□□□□ -0
COL6A2-204ENST00000409416 ZNF18P17022 549 aa15.02■□□□□ -0
COL6A2-204ENST00000409416 LMAN1P49257 510 aa15.02■□□□□ -0
COL6A2-204ENST00000409416 FXR1P51114 621 aaKnown RBP eCLIP15.02■□□□□ -0
COL6A2-204ENST00000409416 SP4Q02446 784 aa15.02■□□□□ -0
COL6A2-204ENST00000409416 SLC35F6Q8N357 371 aa15.02■□□□□ -0
COL6A2-204ENST00000409416 ZNF384Q8TF68 577 aa15.02■□□□□ -0
COL6A2-204ENST00000409416 CCDC102AQ96A19 550 aa15.02■□□□□ -0
COL6A2-204ENST00000409416 RNF26Q9BY78 433 aaPredicted RBP15.02■□□□□ -0
COL6A2-204ENST00000409416 KCND1Q9NSA2 647 aa15.02■□□□□ -0
COL6A2-204ENST00000409416 TJP1Q07157 1748 aa15.02■□□□□ -0
COL6A2-204ENST00000409416 CYP4A11Q02928 519 aa15.02□□□□□ -0.01
COL6A2-204ENST00000409416 SF3A3Q12874 501 aaKnown RBP eCLIP15.02□□□□□ -0.01
COL6A2-204ENST00000409416 NR1I3Q14994 352 aa15.02□□□□□ -0.01
COL6A2-204ENST00000409416 NYXQ9GZU5 481 aa15.02□□□□□ -0.01
COL6A2-204ENST00000409416 SEPT11Q9NVA2 429 aaKnown RBP15.02□□□□□ -0.01
COL6A2-204ENST00000409416 MRFAP1Q9Y605 127 aa15.02□□□□□ -0.01
COL6A2-204ENST00000409416 FAM205AQ6ZU69 1335 aa15.02□□□□□ -0.01
COL6A2-204ENST00000409416 CLRN2A0PK11 232 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 ABL1P00519 1130 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 ZNF76P36508 570 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 EPS15P42566 896 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 ST5P78524 1137 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 CC2D1AQ6P1N0 951 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms