RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 PLEKHM2Q8IWE5 1019 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 IFNL3Q8IZI9 196 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 GPRC5AQ8NFJ5 357 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 RILPL2Q969X0 211 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 COA7Q96BR5 231 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 EVI5LQ96CN4 794 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 CCDC17Q96LX7 622 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 FAM227BQ96M60 508 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 TANGO6Q9C0B7 1094 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 CDHR5Q9HBB8 845 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 BTBD7Q9P203 1132 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 RBBP6Q7Z6E9 1792 aaKnown RBP6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 PLXNB2O15031 1838 aa6.89□□□□□ -1.31
HMGB1P20-201ENST00000402555 RLFQ13129 1914 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 GREB1LQ9C091 1923 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 ROBO3Q96MS0 1386 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 PATL2C9JE40 543 aaKnown RBP6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 INHAP05111 366 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 CCL5P13501 91 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 GNAT2P19087 354 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 CTDSPL2Q05D32 466 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 PPARAQ07869 468 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 TRIM32Q13049 653 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 NMIQ13287 307 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 WDR78Q5VTH9 848 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 NUP88Q99567 741 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 NACAP1Q9BZK3 213 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 NAPBQ9H115 298 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 UNC93B1Q9H1C4 597 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 VCPKMTQ9H867 229 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 MKNK2Q9HBH9 465 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 ARHGEF10LQ9HCE6 1279 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 INCENPQ9NQS7 918 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 TSHZ2Q9NRE2 1034 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 GJD2Q9UKL4 321 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 TMX2Q9Y320 296 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 RABGAP1Q9Y3P9 1069 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 TACC3Q9Y6A5 838 aa6.88□□□□□ -1.31
HMGB1P20-201ENST00000402555 SMAPO00193 183 aa6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 CYP2B6P20813 491 aa6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 UBXN2AP68543 259 aa6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 IRF5Q13568 498 aa6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 FAM47AQ5JRC9 791 aa6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 GPR142Q7Z601 462 aa6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 ZNF589Q86UQ0 364 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 CCAR1Q8IX12 1150 aaKnown RBP6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 TTC13Q8NBP0 860 aa6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 TATDN2Q93075 761 aa6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 CHMP4CQ96CF2 233 aa6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 SHISA4Q96DD7 197 aa6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 ATG4CQ96DT6 458 aa6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 RNF208Q9H0X6 261 aa6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 KANSL2Q9H9L4 492 aa6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 CWC22Q9HCG8 908 aaKnown RBP6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 NPDC1Q9NQX5 325 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 FBXO28Q9NVF7 368 aa6.87□□□□□ -1.31
HMGB1P20-201ENST00000402555 MYH4Q9Y623 1939 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 PARP14Q460N5 1801 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 IGKV6D-41A0A0C4DH26 115 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 WDR46O15213 610 aaKnown RBP6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 FLOT1O75955 427 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 SDSP20132 328 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 MAPK4P31152 587 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 PLS1Q14651 629 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 COG2Q14746 738 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 CCL14Q16627 93 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 MCMDC2Q4G0Z9 681 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 MORN1Q5T089 497 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 FAM83BQ5T0W9 1011 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 LBX2Q6XYB7 198 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 PLEKHH3Q7Z736 793 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 ZNF444Q8N0Y2 327 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 LRRC47Q8N1G4 583 aaKnown RBP6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 PXYLP1Q8TE99 480 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 GTF3C2Q8WUA4 911 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 TRIB2Q92519 343 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 LPAR1Q92633 364 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 CEP95Q96GE4 821 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 DEFB118Q96PH6 123 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 NUDT12Q9BQG2 462 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 MOV10L1Q9BXT6 1211 aaKnown RBP6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 SH2D4AQ9H788 454 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 HELLSQ9NRZ9 838 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 CLIP2Q9UDT6 1046 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 A0A0G2JMZ2 1700 aa6.86□□□□□ -1.31
HMGB1P20-201ENST00000402555 COL11A1P12107 1806 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 CCDC171Q6TFL3 1326 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 TRIOBPQ9H2D6 2365 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 F5H6K3 240 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 NMT2O60551 498 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 NDUFB10O96000 172 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 FGAP02671 866 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 HMGCRP04035 888 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 GJB1P08034 283 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 TSPY3P0CV98 308 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 TSPY8P0CW00 308 aa6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 HSPD1P10809 573 aaKnown RBP6.85□□□□□ -1.31
HMGB1P20-201ENST00000402555 RGS2P41220 211 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms