RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TBC1D8BQ0IIM8 1120 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 PRR16Q569H4 304 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 HERC4Q5GLZ8 1057 aaPredicted RBP15.75■□□□□ 0.11
SCAF4-202ENST00000399804 NSMFQ6X4W1 530 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 MIGA2Q7L4E1 593 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 NEDD1Q8NHV4 660 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 BAG1Q99933 345 aaPredicted RBP15.75■□□□□ 0.11
SCAF4-202ENST00000399804 TAB2Q9NYJ8 693 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 NRBP1Q9UHY1 535 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 AMNQ9BXJ7 453 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 LUC7L2Q9Y383 392 aaKnown RBP15.75■□□□□ 0.11
SCAF4-202ENST00000399804 SLFN14P0C7P3 912 aa15.74■□□□□ 0.11
SCAF4-202ENST00000399804 TRIML1Q8N9V2 468 aa15.74■□□□□ 0.11
SCAF4-202ENST00000399804 POLLQ9UGP5 575 aa15.74■□□□□ 0.11
SCAF4-202ENST00000399804 AKR1B15C9JRZ8 316 aaPredicted RBP15.74■□□□□ 0.11
SCAF4-202ENST00000399804 USO1O60763 962 aaKnown RBP15.74■□□□□ 0.11
SCAF4-202ENST00000399804 CHMP4BP1P59074 171 aa15.74■□□□□ 0.11
SCAF4-202ENST00000399804 PDCL2Q8N4E4 241 aa15.74■□□□□ 0.11
SCAF4-202ENST00000399804 TBC1D7Q9P0N9 293 aa15.74■□□□□ 0.11
SCAF4-202ENST00000399804 UBE2Q2LH0YL09 131 aa15.74■□□□□ 0.11
SCAF4-202ENST00000399804 EEF2KMTQ96G04 330 aa15.74■□□□□ 0.11
SCAF4-202ENST00000399804 ZNF142P52746 1687 aaPredicted RBP15.73■□□□□ 0.11
SCAF4-202ENST00000399804 GTPBP6O43824 516 aaPredicted RBP15.73■□□□□ 0.11
SCAF4-202ENST00000399804 DNA2P51530 1060 aa15.73■□□□□ 0.11
SCAF4-202ENST00000399804 TEX35Q5T0J7 233 aa15.73■□□□□ 0.11
SCAF4-202ENST00000399804 SMYD4Q8IYR2 804 aaPredicted RBP15.73■□□□□ 0.11
SCAF4-202ENST00000399804 MRFAP1L1Q96HT8 127 aa15.73■□□□□ 0.11
SCAF4-202ENST00000399804 SPAG5Q96R06 1193 aa15.73■□□□□ 0.11
SCAF4-202ENST00000399804 ZSWIM4Q9H7M6 989 aa15.73■□□□□ 0.11
SCAF4-202ENST00000399804 ZNF277Q9NRM2 450 aaPredicted RBP15.73■□□□□ 0.11
SCAF4-202ENST00000399804 FLT1P17948 1338 aa15.73■□□□□ 0.11
SCAF4-202ENST00000399804 WDHD1O75717 1129 aaPredicted RBP15.73■□□□□ 0.11
SCAF4-202ENST00000399804 GH2P01242 217 aa15.73■□□□□ 0.11
SCAF4-202ENST00000399804 AKR1B1P15121 316 aa15.73■□□□□ 0.11
SCAF4-202ENST00000399804 AGXT2Q9BYV1 514 aa15.73■□□□□ 0.11
SCAF4-202ENST00000399804 LRRC4BQ9NT99 713 aa15.73■□□□□ 0.11
SCAF4-202ENST00000399804 IMPACTQ9P2X3 320 aa15.73■□□□□ 0.11
SCAF4-202ENST00000399804 DDX25Q9UHL0 483 aaKnown RBP15.73■□□□□ 0.11
SCAF4-202ENST00000399804 CCDC175P0C221 793 aa15.73■□□□□ 0.11
SCAF4-202ENST00000399804 NOC4LQ9BVI4 516 aaKnown RBP15.73■□□□□ 0.11
SCAF4-202ENST00000399804 CLEC11AQ9Y240 323 aa15.73■□□□□ 0.11
SCAF4-202ENST00000399804 RESP18Q5W5W9 173 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 LZTFL1Q9NQ48 299 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 AK9Q5TCS8 1911 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 DDX39AO00148 427 aaKnown RBP15.72■□□□□ 0.11
SCAF4-202ENST00000399804 COBLO75128 1261 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 BMP3P12645 472 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 GRM4Q14833 912 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 VPS36Q86VN1 386 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 CNGA4Q8IV77 575 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 GSDMAQ96QA5 445 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 SRRTQ9BXP5 876 aaKnown RBP15.72■□□□□ 0.11
SCAF4-202ENST00000399804 DNM3Q9UQ16 869 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 MYCLP12524 364 aaPredicted RBP15.72■□□□□ 0.11
SCAF4-202ENST00000399804 NF2P35240 595 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 PPP1R2P41236 205 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 SEPT2Q15019 361 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 UBE2SQ16763 222 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 ANAPC4Q9UJX5 808 aa15.72■□□□□ 0.11
SCAF4-202ENST00000399804 FAM205CA6NFA0 338 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 CETN1Q12798 172 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 HSP90B2PQ58FF3 399 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 ODF2Q5BJF6 829 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 DALRD3Q5D0E6 543 aaKnown RBP15.71■□□□□ 0.11
SCAF4-202ENST00000399804 SYT10Q6XYQ8 523 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 HS2ST1Q7LGA3 356 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 SUGT1Q9Y2Z0 365 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 RIC1Q4ADV7 1423 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 DCAF8L1A6NGE4 600 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 RPN1P04843 607 aaKnown RBP15.71■□□□□ 0.11
SCAF4-202ENST00000399804 CYLC1P35663 651 aaPredicted RBP15.71■□□□□ 0.11
SCAF4-202ENST00000399804 ARID5AQ03989 594 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 ARHGAP27Q6ZUM4 889 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 CLEC10AQ8IUN9 316 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 PIM2Q9P1W9 311 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 LMO7Q8WWI1 1683 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 U2AF2P26368 475 aaKnown RBP eCLIP15.71■□□□□ 0.113e-9■■■□□ 16.3
SCAF4-202ENST00000399804 USP8P40818 1118 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 SHC4Q6S5L8 630 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 MAN1B1Q9UKM7 699 aa15.71■□□□□ 0.11
SCAF4-202ENST00000399804 GPR75-ASB3A0A0A6YYF3 556 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 SPECC1LQ69YQ0 1117 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 CIAPIN1Q6FI81 312 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 PPP4R3AQ6IN85 833 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 RGL2O15211 777 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 ALAS1P13196 640 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 TROAPQ12815 778 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 NELFCDQ8IXH7 590 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 PNMA6FA0A0J9YX94 578 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 RASA1P20936 1047 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 PPP4CP60510 307 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 SNAP25P60880 206 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 TMEM179Q6ZVK1 233 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 TMOD4Q9NZQ9 345 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 LAD1O00515 517 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 IGSF3O75054 1194 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 ZBED4O75132 1171 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 ADKP55263 362 aaKnown RBP15.7■□□□□ 0.1
SCAF4-202ENST00000399804 EZH2Q15910 746 aaKnown RBP15.7■□□□□ 0.1
SCAF4-202ENST00000399804 PTPN21Q16825 1174 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms