RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 TNNI2P48788 182 aa7.83□□□□□ -1.16
CX3CR1-202ENST00000399220 NR5A1Q13285 461 aa7.83□□□□□ -1.16
CX3CR1-202ENST00000399220 TNFAIP1Q13829 316 aa7.83□□□□□ -1.16
CX3CR1-202ENST00000399220 ABCB5Q2M3G0 1257 aa7.83□□□□□ -1.16
CX3CR1-202ENST00000399220 EARS2Q5JPH6 523 aaKnown RBP7.83□□□□□ -1.16
CX3CR1-202ENST00000399220 CMTR1Q8N1G2 835 aaKnown RBP7.83□□□□□ -1.16
CX3CR1-202ENST00000399220 SAMD3Q8N6K7 520 aa7.83□□□□□ -1.16
CX3CR1-202ENST00000399220 FSIP1Q8NA03 581 aa7.83□□□□□ -1.16
CX3CR1-202ENST00000399220 JDP2Q8WYK2 163 aa7.83□□□□□ -1.16
CX3CR1-202ENST00000399220 NAP1L4Q99733 375 aaKnown RBP7.83□□□□□ -1.16
CX3CR1-202ENST00000399220 TNMDQ9H2S6 317 aa7.83□□□□□ -1.16
CX3CR1-202ENST00000399220 STX8Q9UNK0 236 aa7.83□□□□□ -1.16
CX3CR1-202ENST00000399220 ATF5Q9Y2D1 282 aaPredicted RBP7.83□□□□□ -1.16
CX3CR1-202ENST00000399220 LOXHD1Q8IVV2 1947 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 PFKFB1P16118 471 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 NDUFA8P51970 172 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 TRAF1Q13077 416 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 RRP1BQ14684 758 aaKnown RBP7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 CRYGNQ8WXF5 182 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 C6orf50Q9HD87 102 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 PCDHB6Q9Y5E3 794 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 PTPRFP10586 1907 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 ZBTB5O15062 677 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 MYO1BO43795 1136 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 EEF2P13639 858 aaKnown RBP7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 LONP1P36776 959 aaKnown RBP7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 SARSP49591 514 aaKnown RBP7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 TTC38Q5R3I4 469 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 RBM26Q5T8P6 1007 aaKnown RBP7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 KANK3Q6NY19 840 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 FAM200AQ8TCP9 573 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 HOOK2Q96ED9 719 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 CLIP2Q9UDT6 1046 aa7.82□□□□□ -1.16
CX3CR1-202ENST00000399220 CYP3A7-CYP3A51PA0A087WV96 503 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 PIK3CDO00329 1044 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 RAD17O75943 681 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 ZNF202O95125 648 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 CYP3A7P24462 503 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 CAP2P40123 477 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 NLRP5P59047 1200 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 TYRO3Q06418 890 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 FOXD4L6Q3SYB3 417 aaPredicted RBP7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 PPP4R3AQ6IN85 833 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 USP17L2Q6R6M4 530 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 FOXD4L3Q6VB84 417 aaPredicted RBP7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 ADGRF4Q8IZF3 695 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 GPC2Q8N158 579 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 TRIML1Q8N9V2 468 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 UBE2Q2Q8WVN8 375 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 CSRNP1Q96S65 589 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 CABP5Q9NP86 173 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 KINO60870 393 aaKnown RBP7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 VEGFAP15692 232 aaPredicted RBP7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 JAG1P78504 1218 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 GNL2Q13823 731 aaKnown RBP7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 NOL9Q5SY16 702 aaKnown RBP7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 SARM1Q6SZW1 724 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 AK8Q96MA6 479 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 SH2D4AQ9H788 454 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 SPON1Q9HCB6 807 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 KIAA1468Q9P260 1216 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 SEC63Q9UGP8 760 aaKnown RBP7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 ZBTB21Q9ULJ3 1066 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 MYL1P05976 194 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 EIF6P56537 245 aaKnown RBP7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 ICA1Q05084 483 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 STX1AQ16623 288 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 KRBA2Q6ZNG9 492 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 MAGEF1Q9HAY2 307 aa7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 ZNF219Q9P2Y4 722 aaPredicted RBP7.81□□□□□ -1.16
CX3CR1-202ENST00000399220 SSC5DA1L4H1 1573 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 ACTN4O43707 911 aaKnown RBP7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 EDIL3O43854 480 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 PPP1R11O60927 126 aaPredicted RBP7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 LMNB1P20700 586 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 RBM5P52756 815 aaKnown RBP eCLIP7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 AP3B2Q13367 1082 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 IQCB1Q15051 598 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 E2F4Q16254 413 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 SLFN13Q68D06 897 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 CNNM4Q6P4Q7 775 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 APOBEC3FQ8IUX4 373 aaKnown RBP7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 PIGSQ96S52 555 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 CCSER1Q9C0I3 900 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 RANBP17Q9H2T7 1088 aaKnown RBP7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 ARHGEF10LQ9HCE6 1279 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 FAM13BQ9NYF5 915 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 PNMA2Q9UL42 364 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 SYKP43405 635 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 SEPT2Q15019 361 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 FAM160B2Q86V87 743 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 KCTD17Q8N5Z5 321 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 MTMR9Q96QG7 549 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 WDR18Q9BV38 432 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 CUEDC2Q9H467 287 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 KCNH3Q9ULD8 1083 aa7.8□□□□□ -1.16
CX3CR1-202ENST00000399220 F5H6K3 240 aa7.79□□□□□ -1.16
CX3CR1-202ENST00000399220 ADAMTS3O15072 1205 aa7.79□□□□□ -1.16
CX3CR1-202ENST00000399220 ZNF500O60304 480 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms