RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 FKTNO75072 461 aa9.89□□□□□ -0.83
BRCC3-205ENST00000399026 USP14P54578 494 aa9.89□□□□□ -0.83
BRCC3-205ENST00000399026 IRX3P78415 501 aaPredicted RBP9.89□□□□□ -0.83
BRCC3-205ENST00000399026 TFAP4Q01664 338 aa9.89□□□□□ -0.83
BRCC3-205ENST00000399026 IMMTQ16891 758 aaKnown RBP9.89□□□□□ -0.83
BRCC3-205ENST00000399026 AKNAD1Q5T1N1 836 aa9.89□□□□□ -0.83
BRCC3-205ENST00000399026 SIAH1Q8IUQ4 282 aa9.89□□□□□ -0.83
BRCC3-205ENST00000399026 CD99L2Q8TCZ2 262 aa9.89□□□□□ -0.83
BRCC3-205ENST00000399026 STAG1Q8WVM7 1258 aa9.89□□□□□ -0.83
BRCC3-205ENST00000399026 CHMP4CQ96CF2 233 aa9.89□□□□□ -0.83
BRCC3-205ENST00000399026 C12orf42Q96LP6 360 aa9.89□□□□□ -0.83
BRCC3-205ENST00000399026 TANGO6Q9C0B7 1094 aa9.89□□□□□ -0.83
BRCC3-205ENST00000399026 ARHGAP39Q9C0H5 1083 aa9.89□□□□□ -0.83
BRCC3-205ENST00000399026 ASCC2Q9H1I8 757 aaPredicted RBP9.89□□□□□ -0.83
BRCC3-205ENST00000399026 RPAP3Q9H6T3 665 aaPredicted RBP9.89□□□□□ -0.83
BRCC3-205ENST00000399026 KANSL2Q9H9L4 492 aa9.89□□□□□ -0.83
BRCC3-205ENST00000399026 ANO2Q9NQ90 1003 aa9.89□□□□□ -0.83
BRCC3-205ENST00000399026 TAF6LQ9Y6J9 622 aa9.89□□□□□ -0.83
BRCC3-205ENST00000399026 B4E1Z4 1266 aa9.88□□□□□ -0.83
BRCC3-205ENST00000399026 ZNF213O14771 459 aa9.88□□□□□ -0.83
BRCC3-205ENST00000399026 CASC1Q6TDU7 716 aa9.88□□□□□ -0.83
BRCC3-205ENST00000399026 MFSD6Q6ZSS7 791 aa9.88□□□□□ -0.83
BRCC3-205ENST00000399026 ANKRD13CQ8N6S4 541 aa9.88□□□□□ -0.83
BRCC3-205ENST00000399026 NEDD1Q8NHV4 660 aa9.88□□□□□ -0.83
BRCC3-205ENST00000399026 NUP88Q99567 741 aaPredicted RBP9.88□□□□□ -0.83
BRCC3-205ENST00000399026 LSG1Q9H089 658 aaKnown RBP9.88□□□□□ -0.83
BRCC3-205ENST00000399026 SH2D4AQ9H788 454 aa9.88□□□□□ -0.83
BRCC3-205ENST00000399026 VCPKMTQ9H867 229 aa9.88□□□□□ -0.83
BRCC3-205ENST00000399026 MTMR4Q9NYA4 1195 aa9.88□□□□□ -0.83
BRCC3-205ENST00000399026 MTMR7Q9Y216 660 aa9.88□□□□□ -0.83
BRCC3-205ENST00000399026 SLC45A1Q9Y2W3 748 aa9.88□□□□□ -0.83
BRCC3-205ENST00000399026 TMX2Q9Y320 296 aa9.88□□□□□ -0.83
BRCC3-205ENST00000399026 RBM8AQ9Y5S9 174 aaKnown RBP9.88□□□□□ -0.83
BRCC3-205ENST00000399026 CYP21A2P08686 494 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 FGRP09769 529 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 BCRP11274 1271 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 SP3Q02447 781 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 PABPC4Q13310 644 aaKnown RBP eCLIP9.87□□□□□ -0.83
BRCC3-205ENST00000399026 FAM83BQ5T0W9 1011 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 C17orf99Q6UX52 265 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 P2RX7Q99572 595 aaKnown RBP9.87□□□□□ -0.83
BRCC3-205ENST00000399026 ZKSCAN3Q9BRR0 538 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 PAGR1Q9BTK6 254 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 RNF41Q9H4P4 317 aaPredicted RBP9.87□□□□□ -0.83
BRCC3-205ENST00000399026 GOPCQ9HD26 462 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 IL17RBQ9NRM6 502 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 NYAP2Q9P242 653 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 CLIP2Q9UDT6 1046 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 CTNNA3Q9UI47 895 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 STX8Q9UNK0 236 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 HTTP42858 3142 aa9.87□□□□□ -0.83
BRCC3-205ENST00000399026 PLXNB2O15031 1838 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 USP17L15C9J2P7 530 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 USP17L13C9JLJ4 530 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 USP17L11C9JVI0 530 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 USP17L18D6R9N7 530 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 USP17L22D6RA61 530 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 USP17L17D6RBQ6 530 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 USP17L19D6RCP7 530 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 USP17L20D6RJB6 530 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 WDR46O15213 610 aaKnown RBP9.86□□□□□ -0.83
BRCC3-205ENST00000399026 KDM4AO75164 1064 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 TTLL1O95922 423 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 NDUFB10O96000 172 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 CTGFP29279 349 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 HERVK_113P62684 666 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 LACTBP83111 547 aaPredicted RBP9.86□□□□□ -0.83
BRCC3-205ENST00000399026 KCNC4Q03721 635 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 USP17L24Q0WX57 530 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 NOM1Q5C9Z4 860 aaKnown RBP9.86□□□□□ -0.83
BRCC3-205ENST00000399026 KIAA1211Q6ZU35 1233 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 STOX1Q6ZVD7 989 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 CTU1Q7Z7A3 348 aaKnown RBP9.86□□□□□ -0.83
BRCC3-205ENST00000399026 LPAR1Q92633 364 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 ERO1AQ96HE7 468 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 IRX2Q9BZI1 471 aaPredicted RBP9.86□□□□□ -0.83
BRCC3-205ENST00000399026 TXNRD2Q9NNW7 524 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 ISY1Q9ULR0 285 aaKnown RBP9.86□□□□□ -0.83
BRCC3-205ENST00000399026 TRIM17Q9Y577 477 aa9.86□□□□□ -0.83
BRCC3-205ENST00000399026 FLOT1O75955 427 aa9.85□□□□□ -0.83
BRCC3-205ENST00000399026 HOXA7P31268 230 aaPredicted RBP9.85□□□□□ -0.83
BRCC3-205ENST00000399026 FAM110CQ1W6H9 321 aa9.85□□□□□ -0.83
BRCC3-205ENST00000399026 CATSPERGQ6ZRH7 1159 aa9.85□□□□□ -0.83
BRCC3-205ENST00000399026 OTOP1Q7RTM1 612 aa9.85□□□□□ -0.83
BRCC3-205ENST00000399026 TNS4Q8IZW8 715 aa9.85□□□□□ -0.83
BRCC3-205ENST00000399026 ESR2Q92731 530 aa9.85□□□□□ -0.83
BRCC3-205ENST00000399026 MAP4K1Q92918 833 aa9.85□□□□□ -0.83
BRCC3-205ENST00000399026 ATG4CQ96DT6 458 aa9.85□□□□□ -0.83
BRCC3-205ENST00000399026 MCOLN1Q9GZU1 580 aa9.85□□□□□ -0.83
BRCC3-205ENST00000399026 FBXO28Q9NVF7 368 aa9.85□□□□□ -0.83
BRCC3-205ENST00000399026 TNKSO95271 1327 aa9.84□□□□□ -0.83
BRCC3-205ENST00000399026 E7EWF7 191 aa9.84□□□□□ -0.83
BRCC3-205ENST00000399026 F5H6K3 240 aa9.84□□□□□ -0.83
BRCC3-205ENST00000399026 SLC27A2O14975 620 aa9.84□□□□□ -0.83
BRCC3-205ENST00000399026 CNMDO75829 334 aa9.84□□□□□ -0.83
BRCC3-205ENST00000399026 RGS20O76081 388 aa9.84□□□□□ -0.83
BRCC3-205ENST00000399026 PCP11498 1178 aaKnown RBP9.84□□□□□ -0.83
BRCC3-205ENST00000399026 KLRC3Q07444 240 aa9.84□□□□□ -0.83
BRCC3-205ENST00000399026 COL9A3Q14050 684 aaPredicted RBP9.84□□□□□ -0.83
BRCC3-205ENST00000399026 KIF22Q14807 665 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms