RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 EIF3CLB5ME19 914 aaKnown RBP12.23□□□□□ -0.45
HPS4-202ENST00000398145 PDE8BO95263 885 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 SLC8A1P32418 973 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 PICALMQ13492 652 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 CLUL1Q15846 466 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 FAM47AQ5JRC9 791 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 PPP4R3AQ6IN85 833 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 ZNF804AQ7Z570 1209 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 CERS3Q8IU89 383 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 ZBTB38Q8NAP3 1195 aaPredicted RBP12.23□□□□□ -0.45
HPS4-202ENST00000398145 EIF3CQ99613 913 aaKnown RBP12.23□□□□□ -0.45
HPS4-202ENST00000398145 RWDD2AQ9UIY3 292 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 HGSO14964 777 aaPredicted RBP12.23□□□□□ -0.45
HPS4-202ENST00000398145 SEMA3EO15041 775 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 GJC1P36383 396 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 PPP2R5EQ16537 467 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 INF2Q27J81 1249 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 ZNF658Q5TYW1 1059 aaPredicted RBP12.23□□□□□ -0.45
HPS4-202ENST00000398145 MYOCDQ8IZQ8 938 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 SDR42E1Q8WUS8 393 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 ATG3Q9NT62 314 aa12.23□□□□□ -0.45
HPS4-202ENST00000398145 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.23□□□□□ -0.45
HPS4-202ENST00000398145 GNA14O95837 355 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 HIBADHP31937 336 aaKnown RBP12.22□□□□□ -0.45
HPS4-202ENST00000398145 ADD2P35612 726 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 PHKA1P46020 1223 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 ZBED6P86452 979 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 DHTKD1Q96HY7 919 aaPredicted RBP12.22□□□□□ -0.45
HPS4-202ENST00000398145 TBC1D7Q9P0N9 293 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 MRFAP1Q9Y605 127 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 NEO1Q92859 1461 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 MLH3Q9UHC1 1453 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 EHHADHQ08426 723 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 TADA2BQ86TJ2 420 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 WDR24Q96S15 920 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 IL25Q9H293 177 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 ZSWIM5Q9P217 1185 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 HDAC9Q9UKV0 1011 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 ADGRG1Q9Y653 693 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 HEXIM1O94992 359 aaKnown RBP12.22□□□□□ -0.45
HPS4-202ENST00000398145 KRT31Q15323 416 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 NYAP1Q6ZVC0 841 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 LSM14BQ9BX40 385 aaKnown RBP12.22□□□□□ -0.45
HPS4-202ENST00000398145 EPB41L5Q9HCM4 733 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 CTTNBP2NLQ9P2B4 639 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 AMFRQ9UKV5 643 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 CDC42BPBQ9Y5S2 1711 aa12.22□□□□□ -0.45
HPS4-202ENST00000398145 CALUO43852 315 aaPredicted RBP12.21□□□□□ -0.45
HPS4-202ENST00000398145 MMS22LQ6ZRQ5 1243 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 MICAL1Q8TDZ2 1067 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 EPSTI1Q96J88 318 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 HOMER3Q9NSC5 361 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 RNF14Q9UBS8 474 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 YEATS2Q9ULM3 1422 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 IGKV5-2P06315 115 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 OR52Z1P0C646 297 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 RASSF7Q02833 373 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 EPHA10Q5JZY3 1008 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 ALS2CLQ60I27 953 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 PAGE5Q96GU1 130 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 SLC39A2Q9NP94 309 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 ASIC3Q9UHC3 531 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.21□□□□□ -0.45
HPS4-202ENST00000398145 SPHKAPQ2M3C7 1700 aa12.21□□□□□ -0.45
HPS4-202ENST00000398145 DDAH1O94760 285 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 CYP27A1Q02318 531 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 C2orf54Q08AI8 447 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 PI16Q6UXB8 463 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 TPTE2Q6XPS3 522 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 STMN2Q93045 179 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 BICD1Q96G01 975 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 KRT12Q99456 494 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 MAGEF1Q9HAY2 307 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.21□□□□□ -0.46
HPS4-202ENST00000398145 CPSF2Q9P2I0 782 aaKnown RBP12.21□□□□□ -0.46
HPS4-202ENST00000398145 USP42Q9H9J4 1324 aaKnown RBP12.21□□□□□ -0.46
HPS4-202ENST00000398145 SMCO2A6NFE2 343 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 SNCBQ16143 134 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 EMBQ6PCB8 327 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 ZNF365Q70YC5 407 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 TEX11Q8IYF3 940 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 CCDC105Q8IYK2 499 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 CUEDC2Q9H467 287 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 ROBO2Q9HCK4 1378 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 RIPOR2Q9Y4F9 1068 aa12.21□□□□□ -0.46
HPS4-202ENST00000398145 ERVV-2B6SEH9 535 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 ADAMTS2O95450 1211 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 STAMBPO95630 424 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 TECP42680 631 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 ADCY7P51828 1080 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 POLR2FP61218 127 aaKnown RBP12.2□□□□□ -0.46
HPS4-202ENST00000398145 NNTQ13423 1086 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 NYXQ9GZU5 481 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 GPCPD1Q9NPB8 672 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.2□□□□□ -0.46
HPS4-202ENST00000398145 ABCC3O15438 1527 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 GBP1P32455 592 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 STAT1P42224 750 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 GALNT17Q6IS24 598 aa12.2□□□□□ -0.46
HPS4-202ENST00000398145 PNMA1Q8ND90 353 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms