RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 AFG3L2Q9Y4W6 797 aa24.48■■□□□ 1.51
CPNE1-204ENST00000397443 SHISA4Q96DD7 197 aa24.47■■□□□ 1.51
CPNE1-204ENST00000397443 GBA2Q9HCG7 927 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-204ENST00000397443 VCAM1P19320 739 aa24.47■■□□□ 1.51
CPNE1-204ENST00000397443 STAT2P52630 851 aa24.47■■□□□ 1.51
CPNE1-204ENST00000397443 USP14P54578 494 aa24.47■■□□□ 1.51
CPNE1-204ENST00000397443 KIFC2Q96AC6 838 aa24.47■■□□□ 1.51
CPNE1-204ENST00000397443 TANGO6Q9C0B7 1094 aa24.47■■□□□ 1.51
CPNE1-204ENST00000397443 FBXO28Q9NVF7 368 aa24.47■■□□□ 1.51
CPNE1-204ENST00000397443 RBM27Q9P2N5 1060 aaKnown RBP24.47■■□□□ 1.51
CPNE1-204ENST00000397443 ITGBL1O95965 494 aaPredicted RBP24.46■■□□□ 1.51
CPNE1-204ENST00000397443 SMARCA1P28370 1054 aa24.46■■□□□ 1.51
CPNE1-204ENST00000397443 SYDE2Q5VT97 1194 aa24.46■■□□□ 1.51
CPNE1-204ENST00000397443 WWC2Q6AWC2 1192 aa24.46■■□□□ 1.51
CPNE1-204ENST00000397443 XBP1P17861 261 aa24.45■■□□□ 1.51
CPNE1-204ENST00000397443 ERO1BQ86YB8 467 aa24.45■■□□□ 1.51
CPNE1-204ENST00000397443 LPAR1Q92633 364 aa24.45■■□□□ 1.51
CPNE1-204ENST00000397443 IRF6O14896 467 aa24.45■■□□□ 1.5
CPNE1-204ENST00000397443 FAM173BQ6P4H8 233 aa24.45■■□□□ 1.5
CPNE1-204ENST00000397443 C2orf69Q8N8R5 385 aa24.45■■□□□ 1.5
CPNE1-204ENST00000397443 OPTNQ96CV9 577 aa24.45■■□□□ 1.5
CPNE1-204ENST00000397443 PDIA4P13667 645 aaKnown RBP24.44■■□□□ 1.5
CPNE1-204ENST00000397443 GNL2Q13823 731 aaKnown RBP24.44■■□□□ 1.5
CPNE1-204ENST00000397443 LDLRAD1Q5T700 205 aa24.44■■□□□ 1.5
CPNE1-204ENST00000397443 SLC10A4Q96EP9 437 aa24.44■■□□□ 1.5
CPNE1-204ENST00000397443 RPAP3Q9H6T3 665 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-204ENST00000397443 PRR12Q9ULL5 1215 aa24.44■■□□□ 1.5
CPNE1-204ENST00000397443 WDR46O15213 610 aaKnown RBP24.43■■□□□ 1.5
CPNE1-204ENST00000397443 CDC37Q16543 378 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-204ENST00000397443 TMOD4Q9NZQ9 345 aa24.43■■□□□ 1.5
CPNE1-204ENST00000397443 SPDYE5A6NIY4 337 aa24.43■■□□□ 1.5
CPNE1-204ENST00000397443 C19orf81C9J6K1 198 aa24.43■■□□□ 1.5
CPNE1-204ENST00000397443 MMP1P03956 469 aa24.43■■□□□ 1.5
CPNE1-204ENST00000397443 PPATQ06203 517 aa24.43■■□□□ 1.5
CPNE1-204ENST00000397443 CST9Q5W186 159 aa24.43■■□□□ 1.5
CPNE1-204ENST00000397443 TYW1BQ6NUM6 668 aa24.43■■□□□ 1.5
CPNE1-204ENST00000397443 COA7Q96BR5 231 aa24.43■■□□□ 1.5
CPNE1-204ENST00000397443 PNMA6FA0A0J9YX94 578 aa24.42■■□□□ 1.5
CPNE1-204ENST00000397443 KIF28PB7ZC32 967 aa24.42■■□□□ 1.5
CPNE1-204ENST00000397443 KIF3CO14782 793 aa24.42■■□□□ 1.5
CPNE1-204ENST00000397443 ZBTB5O15062 677 aa24.42■■□□□ 1.5
CPNE1-204ENST00000397443 NLRP5P59047 1200 aa24.42■■□□□ 1.5
CPNE1-204ENST00000397443 RESTQ13127 1097 aa24.42■■□□□ 1.5
CPNE1-204ENST00000397443 QRICH1Q2TAL8 776 aa24.42■■□□□ 1.5
CPNE1-204ENST00000397443 BTNL9Q6UXG8 535 aa24.42■■□□□ 1.5
CPNE1-204ENST00000397443 CHURC1Q8WUH1 139 aa24.42■■□□□ 1.5
CPNE1-204ENST00000397443 FEM1BQ9UK73 627 aa24.42■■□□□ 1.5
CPNE1-204ENST00000397443 PPP1R11O60927 126 aaPredicted RBP24.41■■□□□ 1.5
CPNE1-204ENST00000397443 FLOT1O75955 427 aa24.41■■□□□ 1.5
CPNE1-204ENST00000397443 NAPAP54920 295 aa24.41■■□□□ 1.5
CPNE1-204ENST00000397443 MKRN3Q13064 507 aaKnown RBP24.41■■□□□ 1.5
CPNE1-204ENST00000397443 BARHL2Q9NY43 387 aa24.41■■□□□ 1.5
CPNE1-204ENST00000397443 STXBP3O00186 592 aa24.41■■□□□ 1.5
CPNE1-204ENST00000397443 KIF23Q02241 960 aaPredicted RBP24.41■■□□□ 1.5
CPNE1-204ENST00000397443 SAFBQ15424 915 aaKnown RBP eCLIP24.41■■□□□ 1.51e-17■■■■□ 20.2
CPNE1-204ENST00000397443 GADL1Q6ZQY3 521 aa24.41■■□□□ 1.5
CPNE1-204ENST00000397443 DIS3L2Q8IYB7 885 aaKnown RBP24.41■■□□□ 1.5
CPNE1-204ENST00000397443 RBM46Q8TBY0 533 aaKnown RBP24.41■■□□□ 1.5
CPNE1-204ENST00000397443 OXER1Q8TDS5 423 aa24.41■■□□□ 1.5
CPNE1-204ENST00000397443 PHF20Q9BVI0 1012 aa24.41■■□□□ 1.5
CPNE1-204ENST00000397443 BTBD18B2RXH4 712 aa24.4■■□□□ 1.5
CPNE1-204ENST00000397443 TAL1P17542 331 aaPredicted RBP24.4■■□□□ 1.5
CPNE1-204ENST00000397443 FKBP1BP68106 108 aa24.4■■□□□ 1.5
CPNE1-204ENST00000397443 CCDC174Q6PII3 467 aa24.4■■□□□ 1.5
CPNE1-204ENST00000397443 NCLP19338 710 aaKnown RBP24.39■■□□□ 1.5
CPNE1-204ENST00000397443 NR5A1Q13285 461 aa24.39■■□□□ 1.5
CPNE1-204ENST00000397443 USH1GQ495M9 461 aa24.39■■□□□ 1.5
CPNE1-204ENST00000397443 FAM160B2Q86V87 743 aa24.39■■□□□ 1.5
CPNE1-204ENST00000397443 MTMR8Q96EF0 704 aa24.39■■□□□ 1.5
CPNE1-204ENST00000397443 SLF1Q9BQI6 1058 aa24.39■■□□□ 1.5
CPNE1-204ENST00000397443 BAG4O95429 457 aaKnown RBP24.39■■□□□ 1.49
CPNE1-204ENST00000397443 GJA5P36382 358 aa24.39■■□□□ 1.49
CPNE1-204ENST00000397443 PPIL2Q13356 520 aa24.39■■□□□ 1.49
CPNE1-204ENST00000397443 PTPRFP10586 1907 aa24.39■■□□□ 1.49
CPNE1-204ENST00000397443 ADAMTS3O15072 1205 aa24.38■■□□□ 1.49
CPNE1-204ENST00000397443 DNM1Q05193 864 aaKnown RBP24.38■■□□□ 1.49
CPNE1-204ENST00000397443 TREML2Q5T2D2 321 aa24.38■■□□□ 1.49
CPNE1-204ENST00000397443 C12orf42Q96LP6 360 aa24.38■■□□□ 1.49
CPNE1-204ENST00000397443 ZSCAN16Q9H4T2 348 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-204ENST00000397443 ATP6V1DQ9Y5K8 247 aa24.38■■□□□ 1.49
CPNE1-204ENST00000397443 CCDC148Q8NFR7 591 aa24.37■■□□□ 1.49
CPNE1-204ENST00000397443 GBP4Q96PP9 640 aa24.37■■□□□ 1.49
CPNE1-204ENST00000397443 SH3GLB2Q9NR46 395 aa24.37■■□□□ 1.49
CPNE1-204ENST00000397443 TRPM7Q96QT4 1865 aa24.37■■□□□ 1.49
CPNE1-204ENST00000397443 KRT2P35908 639 aa24.37■■□□□ 1.49
CPNE1-204ENST00000397443 HUNKP57058 714 aa24.37■■□□□ 1.49
CPNE1-204ENST00000397443 SH3D19Q5HYK7 790 aa24.37■■□□□ 1.49
CPNE1-204ENST00000397443 PRPF38AQ8NAV1 312 aaKnown RBP24.37■■□□□ 1.49
CPNE1-204ENST00000397443 BRMS1Q9HCU9 246 aa24.37■■□□□ 1.49
CPNE1-204ENST00000397443 PCDHA1Q9Y5I3 950 aa24.37■■□□□ 1.49
CPNE1-204ENST00000397443 TCHHQ07283 1943 aa24.36■■□□□ 1.49
CPNE1-204ENST00000397443 NPY5RQ15761 445 aa24.36■■□□□ 1.49
CPNE1-204ENST00000397443 FBXO11Q86XK2 927 aa24.36■■□□□ 1.49
CPNE1-204ENST00000397443 A0A0G2JLL6 359 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-204ENST00000397443 SMCO2A6NFE2 343 aa24.35■■□□□ 1.49
CPNE1-204ENST00000397443 CXCL11O14625 94 aa24.35■■□□□ 1.49
CPNE1-204ENST00000397443 PLA2G6O60733 806 aa24.35■■□□□ 1.49
CPNE1-204ENST00000397443 YY1P25490 414 aa24.35■■□□□ 1.49
CPNE1-204ENST00000397443 PRRT2Q7Z6L0 340 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-204ENST00000397443 SMC1BQ8NDV3 1235 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms