RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 TRIM37O94972 964 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 CEACAM5P06731 702 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 COL6A1P12109 1028 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 GRAMD1BQ3KR37 738 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 PCNX4Q63HM2 1172 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 MAP1SQ66K74 1059 aaPredicted RBP6.27□□□□□ -1.41
GABPB1-204ENST00000396464 SLC4A10Q6U841 1118 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 CCDC81Q6ZN84 652 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 CHPFQ8IZ52 775 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 JMYQ8N9B5 988 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 ZNF296Q8WUU4 475 aaPredicted RBP6.27□□□□□ -1.41
GABPB1-204ENST00000396464 E2F7Q96AV8 911 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 MFSD3Q96ES6 412 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 NOC4LQ9BVI4 516 aaKnown RBP6.27□□□□□ -1.41
GABPB1-204ENST00000396464 ZHX3Q9H4I2 956 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 PPCSQ9HAB8 311 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 PTPRHQ9HD43 1115 aa6.27□□□□□ -1.41
GABPB1-204ENST00000396464 EPB41L2O43491 1005 aaKnown RBP6.26□□□□□ -1.41
GABPB1-204ENST00000396464 AKAP10O43572 662 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 RNASE1P07998 156 aaKnown RBP6.26□□□□□ -1.41
GABPB1-204ENST00000396464 FAM163BP0C2L3 166 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 MYCLP1P12525 358 aaPredicted RBP6.26□□□□□ -1.41
GABPB1-204ENST00000396464 ARNTP27540 789 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 NFKB2Q00653 900 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 MTERF2Q49AM1 385 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 CT47A1Q5JQC4 288 aaPredicted RBP6.26□□□□□ -1.41
GABPB1-204ENST00000396464 ACBD5Q5T8D3 534 aaPredicted RBP6.26□□□□□ -1.41
GABPB1-204ENST00000396464 IFNL3Q8IZI9 196 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 SYNPOQ8N3V7 929 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 GLIS3Q8NEA6 775 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 RUNDC1Q96C34 613 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 NT5C1AQ9BXI3 368 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 BCO2Q9BYV7 579 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 ASPSCR1Q9BZE9 553 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 CAAP1Q9H8G2 361 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 MBNL3Q9NUK0 354 aaKnown RBP6.26□□□□□ -1.41
GABPB1-204ENST00000396464 GTF2IRD1Q9UHL9 959 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 TAGLN3Q9UI15 199 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 MRPS23Q9Y3D9 190 aaKnown RBP6.26□□□□□ -1.41
GABPB1-204ENST00000396464 SAMM50Q9Y512 469 aa6.26□□□□□ -1.41
GABPB1-204ENST00000396464 DIAPH1O60610 1272 aaKnown RBP6.25□□□□□ -1.41
GABPB1-204ENST00000396464 CD96P40200 585 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 NEK2P51955 445 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 PWP1Q13610 501 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 SEPT6Q14141 434 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 NXPE4Q6UWF7 544 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 UBR7Q8N806 425 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 PDILTQ8N807 584 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 RNF214Q8ND24 703 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 MYRIPQ8NFW9 859 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 ISL2Q96A47 359 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 PFDN2Q9UHV9 154 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 PCDHGC5Q9Y5F6 944 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 KDM2BQ8NHM5 1336 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 IRS4O14654 1257 aaPredicted RBP6.25□□□□□ -1.41
GABPB1-204ENST00000396464 KATNA1O75449 491 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 NME2P22392 152 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 GBP2P32456 591 aaPredicted RBP6.25□□□□□ -1.41
GABPB1-204ENST00000396464 GUCY2FP51841 1108 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 OXCT1P55809 520 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 ERVK-24P63145 666 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 IKZF1Q13422 519 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 ZNF124Q15973 351 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 FBXL19Q6PCT2 694 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 WFDC3Q8IUB2 231 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 RELL1Q8IUW5 271 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 NIM1KQ8IY84 436 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 SPICE1Q8N0Z3 855 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 LRRN4CLQ8ND94 238 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 C1orf131Q8NDD1 294 aaKnown RBP6.25□□□□□ -1.41
GABPB1-204ENST00000396464 TMEM40Q8WWA1 233 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 TMEM74Q96NL1 305 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 SRCIN1Q9C0H9 1055 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 ACTR10Q9NZ32 417 aa6.25□□□□□ -1.41
GABPB1-204ENST00000396464 ARID1BQ8NFD5 2236 aaPredicted RBP6.24□□□□□ -1.41
GABPB1-204ENST00000396464 A0A087X0B3 334 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 CCDC163A0A0D9SF12 145 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 GNAT3A8MTJ3 354 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 NEFMP07197 916 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 LDHCP07864 332 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 SOX5P35711 763 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 TRAPPC10P48553 1259 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 ZC3H12AQ5D1E8 599 aaKnown RBP6.24□□□□□ -1.41
GABPB1-204ENST00000396464 CARMIL2Q6F5E8 1435 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 ERAP2Q6P179 960 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 SLC23A3Q6PIS1 610 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 CDC37L1Q7L3B6 337 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 RNF180Q86T96 592 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 PDZD3Q86UT5 571 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 ASB11Q8WXH4 323 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 NINJ1Q92982 152 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 CDH19Q9H159 772 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 AS3MTQ9HBK9 375 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 UBP1Q9NZI7 540 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 ADAMTS6Q9UKP5 1117 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 PPT2Q9UMR5 302 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 SNX11Q9Y5W9 270 aa6.24□□□□□ -1.41
GABPB1-204ENST00000396464 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.24□□□□□ -1.41
GABPB1-204ENST00000396464 DBX1A6NMT0 343 aa6.23□□□□□ -1.41
GABPB1-204ENST00000396464 PDE8AO60658 829 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms