RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 RGL3Q3MIN7 710 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 MRM1Q6IN84 353 aaKnown RBP4.11□□□□□ -1.75
XRN1-202ENST00000392981 SDR16C5Q8N3Y7 309 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 GOLGA6L1Q8N7Z2 621 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 ZNF280CQ8ND82 737 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 CLUHP3Q96NS8 147 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 KIAA1586Q9HCI6 787 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 RABL2BQ9UNT1 228 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 TLL2Q9Y6L7 1015 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 ERC2O15083 957 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 RPN1P04843 607 aaKnown RBP4.11□□□□□ -1.75
XRN1-202ENST00000392981 DDIT3P35638 169 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 LRRFIP1Q32MZ4 808 aaKnown RBP4.11□□□□□ -1.75
XRN1-202ENST00000392981 VPS53Q5VIR6 699 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 GATAD2BQ8WXI9 593 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 MUL1Q969V5 352 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 SUSD3Q96L08 255 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 CLIC5Q9NZA1 410 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 APOBEC2Q9Y235 224 aaKnown RBP4.11□□□□□ -1.75
XRN1-202ENST00000392981 PCDHA9Q9Y5H5 950 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 J3KRW8 73 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 ALDH1A1P00352 501 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 ZKSCAN1P17029 563 aaPredicted RBP4.11□□□□□ -1.75
XRN1-202ENST00000392981 PPP2R2AP63151 447 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 C4orf48Q5BLP8 95 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 RILPL1Q5EBL4 403 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 WIPI1Q5MNZ9 446 aaPredicted RBP4.11□□□□□ -1.75
XRN1-202ENST00000392981 HYIQ5T013 277 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 CDCA2Q69YH5 1023 aaPredicted RBP4.11□□□□□ -1.75
XRN1-202ENST00000392981 HFE2Q6ZVN8 426 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 PRICKLE2Q7Z3G6 844 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 UBE2Q1Q7Z7E8 422 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 ANKRD18AQ8IVF6 992 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 GALNT12Q8IXK2 581 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 ZNF513Q8N8E2 541 aaPredicted RBP4.11□□□□□ -1.75
XRN1-202ENST00000392981 MSANTD4Q8NCY6 345 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 SLC2A13Q96QE2 648 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 FTOQ9C0B1 505 aaKnown RBP eCLIP4.11□□□□□ -1.75
XRN1-202ENST00000392981 ARMT1Q9H993 441 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 PLEKHA5Q9HAU0 1116 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 ZFYVE1Q9HBF4 777 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 PPM1HQ9ULR3 514 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 TGFBR3LH3BV60 316 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 DDX3XO00571 662 aaKnown RBP eCLIP4.11□□□□□ -1.752e-11■□□□□ 11.2
XRN1-202ENST00000392981 CBFA2T2O43439 604 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 IGHA2P01877 340 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 FOXB2Q5VYV0 432 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 AFAP1L2Q8N4X5 818 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 VMP1Q96GC9 406 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 EXOC2Q96KP1 924 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 WASF2Q9Y6W5 498 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 SPDYE3A6NKU9 549 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 MEIS1O00470 390 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 PES1O00541 588 aaKnown RBP4.1□□□□□ -1.75
XRN1-202ENST00000392981 PAGE1O75459 146 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 KCNH1O95259 989 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 ERVK-9P63128 1117 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 ICA1Q05084 483 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 TERF2Q15554 542 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 ATG16L2Q8NAA4 619 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 XAGE3Q8WTP9 111 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 GBP3Q9H0R5 595 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 C11orf16Q9NQ32 467 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 ITGB1BP2Q9UKP3 347 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 ZNRF3Q9ULT6 936 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 MSRB2Q9Y3D2 182 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 NUB1Q9Y5A7 615 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 KLHL33A6NCF5 533 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 TTC36A6NLP5 189 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 APOL3O95236 402 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 FKBP9O95302 570 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 OSMP13725 252 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 KIF23Q02241 960 aaPredicted RBP4.1□□□□□ -1.75
XRN1-202ENST00000392981 CALD1Q05682 793 aaKnown RBP4.1□□□□□ -1.75
XRN1-202ENST00000392981 FKBP9P1Q75LS8 142 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 SCUBE1Q8IWY4 988 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 USHBP1Q8N6Y0 703 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 ZNF527Q8NB42 609 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 LACRTQ9GZZ8 138 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 ERBB4Q15303 1308 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 CCT2P78371 535 aaKnown RBP4.1□□□□□ -1.75
XRN1-202ENST00000392981 ZYXQ15942 572 aaKnown RBP4.1□□□□□ -1.75
XRN1-202ENST00000392981 DPY19L1Q2PZI1 675 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 DARS2Q6PI48 645 aaKnown RBP4.1□□□□□ -1.75
XRN1-202ENST00000392981 TRIM42Q8IWZ5 723 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 ZBTB34Q8NCN2 500 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 NAXEQ8NCW5 288 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 PAWRQ96IZ0 340 aaKnown RBP4.1□□□□□ -1.75
XRN1-202ENST00000392981 CRYL1Q9Y2S2 319 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 PCDHGB2Q9Y5G2 931 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 UTRNP46939 3433 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 EIF3FO00303 357 aaPredicted RBP4.1□□□□□ -1.75
XRN1-202ENST00000392981 PRKD3O94806 890 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 INMTO95050 263 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 GHRHP01286 108 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 SNRPB2P08579 225 aaKnown RBP4.1□□□□□ -1.75
XRN1-202ENST00000392981 OCRLQ01968 901 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 UNC5AQ6ZN44 842 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 HEATR4Q86WZ0 1026 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 SLITRK4Q8IW52 837 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms