RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 GIPC1O14908 333 aa17.71■□□□□ 0.43
SHANK1-204ENST00000391814 SKIP12755 728 aa17.71■□□□□ 0.43
SHANK1-204ENST00000391814 SCYL1Q96KG9 808 aa17.71■□□□□ 0.43
SHANK1-204ENST00000391814 IL1RL1Q01638 556 aa17.71■□□□□ 0.43
SHANK1-204ENST00000391814 SSH2Q76I76 1423 aa17.71■□□□□ 0.43
SHANK1-204ENST00000391814 DPCR1Q3MIW9 517 aa17.71■□□□□ 0.42
SHANK1-204ENST00000391814 MMEL1Q495T6 779 aa17.71■□□□□ 0.42
SHANK1-204ENST00000391814 RNF34Q969K3 372 aa17.71■□□□□ 0.42
SHANK1-204ENST00000391814 RIC8AQ9NPQ8 531 aa17.71■□□□□ 0.42
SHANK1-204ENST00000391814 hCG_2014768A0A024R1R8 64 aa17.7■□□□□ 0.42
SHANK1-204ENST00000391814 ZNF449Q6P9G9 518 aa17.7■□□□□ 0.42
SHANK1-204ENST00000391814 ST13P4Q8IZP2 240 aaPredicted RBP17.7■□□□□ 0.42
SHANK1-204ENST00000391814 RPN1P04843 607 aaKnown RBP17.7■□□□□ 0.42
SHANK1-204ENST00000391814 KRT3P12035 628 aa17.7■□□□□ 0.42
SHANK1-204ENST00000391814 SLCO1A2P46721 670 aa17.7■□□□□ 0.42
SHANK1-204ENST00000391814 TMTC3Q6ZXV5 915 aa17.7■□□□□ 0.42
SHANK1-204ENST00000391814 DYDC2Q96IM9 177 aa17.7■□□□□ 0.42
SHANK1-204ENST00000391814 MPHOSPH6Q99547 160 aaKnown RBP17.7■□□□□ 0.42
SHANK1-204ENST00000391814 AFG3L2Q9Y4W6 797 aa17.7■□□□□ 0.42
SHANK1-204ENST00000391814 DDX39AO00148 427 aaKnown RBP17.7■□□□□ 0.42
SHANK1-204ENST00000391814 HDLBPQ00341 1268 aaKnown RBP17.7■□□□□ 0.42
SHANK1-204ENST00000391814 KAZNQ674X7 775 aa17.7■□□□□ 0.42
SHANK1-204ENST00000391814 ZC3H18Q86VM9 953 aaKnown RBP17.7■□□□□ 0.42
SHANK1-204ENST00000391814 FAM167BQ9BTA0 163 aa17.7■□□□□ 0.42
SHANK1-204ENST00000391814 CARD14Q9BXL6 1004 aa17.7■□□□□ 0.42
SHANK1-204ENST00000391814 ADAM21Q9UKJ8 722 aa17.7■□□□□ 0.42
SHANK1-204ENST00000391814 CCDC151A5D8V7 595 aa17.7■□□□□ 0.42
SHANK1-204ENST00000391814 RPS6KA2Q15349 733 aa17.7■□□□□ 0.42
SHANK1-204ENST00000391814 PASKQ96RG2 1323 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 ZSWIM6Q9HCJ5 1215 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 IRAK4Q9NWZ3 460 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 EXOC3O60645 756 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 IFNB1P01574 187 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 TRAF1Q13077 416 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 ALS2CLQ60I27 953 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 RDH13Q8NBN7 331 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 CUL7Q14999 1698 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 MSH2P43246 934 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 TAF12Q16514 161 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 ZNF804AQ7Z570 1209 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 XAGE2Q96GT9 111 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 EIF6P56537 245 aaKnown RBP17.69■□□□□ 0.42
SHANK1-204ENST00000391814 ARID5BQ14865 1188 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 KMT5BQ4FZB7 885 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 SMTNP53814 917 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 OTUD6AQ7L8S5 288 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 CNOT10Q9H9A5 744 aaKnown RBP17.69■□□□□ 0.42
SHANK1-204ENST00000391814 CLEC11AQ9Y240 323 aa17.69■□□□□ 0.42
SHANK1-204ENST00000391814 TADA3O75528 432 aa17.68■□□□□ 0.42
SHANK1-204ENST00000391814 KIF22Q14807 665 aa17.68■□□□□ 0.42
SHANK1-204ENST00000391814 IBTKQ9P2D0 1353 aaPredicted RBP17.68■□□□□ 0.42
SHANK1-204ENST00000391814 KRT10P13645 584 aa17.68■□□□□ 0.42
SHANK1-204ENST00000391814 PARP9Q8IXQ6 854 aa17.68■□□□□ 0.42
SHANK1-204ENST00000391814 CYTH2Q99418 400 aa17.68■□□□□ 0.42
SHANK1-204ENST00000391814 EXOC7Q9UPT5 735 aa17.68■□□□□ 0.42
SHANK1-204ENST00000391814 EEF1GP26641 437 aaKnown RBP17.68■□□□□ 0.42
SHANK1-204ENST00000391814 STAT1P42224 750 aa17.68■□□□□ 0.42
SHANK1-204ENST00000391814 DNAJC8O75937 253 aaPredicted RBP17.68■□□□□ 0.42
SHANK1-204ENST00000391814 ATF7P17544 494 aaPredicted RBP17.68■□□□□ 0.42
SHANK1-204ENST00000391814 ATICP31939 592 aa17.68■□□□□ 0.42
SHANK1-204ENST00000391814 TM6SF1Q9BZW5 370 aa17.68■□□□□ 0.42
SHANK1-204ENST00000391814 GGCXP38435 758 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 PDCLQ13371 301 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 PCDHB13Q9Y5F0 798 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 CHUKO15111 745 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 PFKFB2O60825 505 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 BRD2P25440 801 aaKnown RBP17.67■□□□□ 0.42
SHANK1-204ENST00000391814 NONOQ15233 471 aaKnown RBP eCLIP17.67■□□□□ 0.42
SHANK1-204ENST00000391814 PPP2R5EQ16537 467 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 TBK1Q9UHD2 729 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 DNM3Q9UQ16 869 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 SCRN1Q12765 414 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 TRIML1Q8N9V2 468 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 ZNF594Q96JF6 807 aaPredicted RBP17.67■□□□□ 0.42
SHANK1-204ENST00000391814 NUP160Q12769 1436 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 H7C1D1 291 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 IRS4O14654 1257 aaPredicted RBP17.67■□□□□ 0.42
SHANK1-204ENST00000391814 PRDM1O75626 825 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 ESRRGP62508 458 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 MRPS25P82663 173 aaKnown RBP17.67■□□□□ 0.42
SHANK1-204ENST00000391814 SNX1Q13596 522 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 NBPF5PQ86XG9 351 aaPredicted RBP17.67■□□□□ 0.42
SHANK1-204ENST00000391814 CCHCR1Q8TD31 782 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 APPBP2Q92624 585 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 SYMPKQ92797 1274 aaKnown RBP17.67■□□□□ 0.42
SHANK1-204ENST00000391814 SCINQ9Y6U3 715 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 EEF1DP29692 281 aaKnown RBP17.67■□□□□ 0.42
SHANK1-204ENST00000391814 JADE1Q6IE81 842 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 RSPH3Q86UC2 560 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 NOSTRINQ8IVI9 506 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 GSPT2Q8IYD1 628 aaKnown RBP17.67■□□□□ 0.42
SHANK1-204ENST00000391814 ZFYVE9O95405 1425 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 ARHGEF35A5YM69 484 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 GABPAQ06546 454 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 STRN3Q13033 797 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 PDCD2Q16342 344 aaPredicted RBP17.67■□□□□ 0.42
SHANK1-204ENST00000391814 ST7Q9NRC1 585 aa17.67■□□□□ 0.42
SHANK1-204ENST00000391814 MORC2Q9Y6X9 1032 aaPredicted RBP17.67■□□□□ 0.42
SHANK1-204ENST00000391814 ZMYM3Q14202 1370 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 TOGARAM2Q6ZUX3 1019 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms