RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 FLOT1O75955 427 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 ESRRBO95718 433 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 GBP5Q96PP8 586 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 IFT122Q9HBG6 1241 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 SGK1O00141 431 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 DKC1O60832 514 aaKnown RBP eCLIP13.64□□□□□ -0.231e-26■■■■■ 66.1
CHD3-203ENST00000380358 EPHB1P54762 984 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 SFMBT2Q5VUG0 894 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 ZBTB8OSQ8IWT0 167 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 PPM1KQ8N3J5 372 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 CFAP61Q8NHU2 1237 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 ADGRF5Q8IZF2 1346 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 C2CD5Q86YS7 1000 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 GOLGA8CPA6NN73 597 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 KCNK3O14649 394 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 TMEM191BP0C7N4 346 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 INPP5BP32019 993 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 GOLGA8FQ08AF8 430 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 GOLGA8DPQ0D2H9 430 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 PRPSAP1Q14558 356 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 COG4Q9H9E3 785 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 SLC13A4Q9UKG4 626 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 RPS6KA1Q15418 735 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 ZNF449Q6P9G9 518 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 GPBP1Q86WP2 473 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 HESX1Q9UBX0 185 aa13.64□□□□□ -0.23
CHD3-203ENST00000380358 CCDC38Q502W7 563 aa13.63□□□□□ -0.23
CHD3-203ENST00000380358 DHX32Q7L7V1 743 aaKnown RBP13.63□□□□□ -0.23
CHD3-203ENST00000380358 MAGEA1P43355 309 aa13.63□□□□□ -0.23
CHD3-203ENST00000380358 YWHAGP61981 247 aaKnown RBP eCLIP13.63□□□□□ -0.23
CHD3-203ENST00000380358 KCNA1Q09470 495 aa13.63□□□□□ -0.23
CHD3-203ENST00000380358 EEF1B2P24534 225 aaKnown RBP13.63□□□□□ -0.23
CHD3-203ENST00000380358 KIF11P52732 1056 aa13.63□□□□□ -0.23
CHD3-203ENST00000380358 CYP4A11Q02928 519 aa13.63□□□□□ -0.23
CHD3-203ENST00000380358 MTX1Q13505 466 aa13.63□□□□□ -0.23
CHD3-203ENST00000380358 INTUQ9ULD6 942 aa13.63□□□□□ -0.23
CHD3-203ENST00000380358 FGD5Q6ZNL6 1462 aa13.63□□□□□ -0.23
CHD3-203ENST00000380358 ACTN1P12814 892 aa13.63□□□□□ -0.23
CHD3-203ENST00000380358 CABS1Q96KC9 395 aa13.63□□□□□ -0.23
CHD3-203ENST00000380358 HAUS8Q9BT25 410 aa13.63□□□□□ -0.23
CHD3-203ENST00000380358 EEF1GP26641 437 aaKnown RBP13.62□□□□□ -0.23
CHD3-203ENST00000380358 CEP128Q6ZU80 1094 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 XAGE2Q96GT9 111 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 KCNH3Q9ULD8 1083 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 TNNQ9UQP3 1299 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 MYL5Q02045 173 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 IPO11Q9UI26 975 aaKnown RBP13.62□□□□□ -0.23
CHD3-203ENST00000380358 A1BGP04217 495 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 TFAP4Q01664 338 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 CCDC85BQ15834 202 aaPredicted RBP13.62□□□□□ -0.23
CHD3-203ENST00000380358 ARHGAP24Q8N264 748 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 PFDN6O15212 129 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 ARHGAP4P98171 946 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 NLRP7Q8WX94 980 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 ZSCAN32Q9NX65 697 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 RGS16O15492 202 aaPredicted RBP13.62□□□□□ -0.23
CHD3-203ENST00000380358 HLA-DPA1P20036 260 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 PEX19P40855 299 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 ADKP55263 362 aaKnown RBP13.62□□□□□ -0.23
CHD3-203ENST00000380358 DNAAF3Q8N9W5 541 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 PCDHB4Q9Y5E5 795 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 GPC4O75487 556 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 TROVE2P10155 538 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHD3-203ENST00000380358 RSBN1LQ6PCB5 846 aaPredicted RBP13.62□□□□□ -0.23
CHD3-203ENST00000380358 PI4K2BQ8TCG2 481 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 RPGRIP1Q96KN7 1286 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 PRIMPOLQ96LW4 560 aa13.62□□□□□ -0.23
CHD3-203ENST00000380358 ATF5Q9Y2D1 282 aaPredicted RBP13.62□□□□□ -0.23
CHD3-203ENST00000380358 IRX4P78413 519 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 AP5M1Q9H0R1 490 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 MAP10Q9P2G4 905 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 USP21Q9UK80 565 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 DAAM1Q9Y4D1 1078 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 THAP12O43422 761 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 GIGYF1O75420 1035 aaPredicted RBP13.61□□□□□ -0.23
CHD3-203ENST00000380358 DDX41Q9UJV9 622 aaKnown RBP13.61□□□□□ -0.23
CHD3-203ENST00000380358 IDI1Q13907 227 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 AKAP4Q5JQC9 854 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 FAM182BQ5T319 152 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 CFAP36Q96G28 342 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 TTC21BQ7Z4L5 1316 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 GOLGA8SH3BPF8 625 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 HADHQ16836 314 aaKnown RBP13.61□□□□□ -0.23
CHD3-203ENST00000380358 MTHFSDQ2M296 383 aaKnown RBP13.61□□□□□ -0.23
CHD3-203ENST00000380358 SLC38A10Q9HBR0 1119 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 WDR91A4D1P6 747 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 SMCO2A6NFE2 343 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 PNOCQ13519 176 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 GNPTABQ3T906 1256 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 ZNF148Q9UQR1 794 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 H3BRJ5 948 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 NEMP1O14524 444 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 ELF1P32519 619 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 TRIM59Q8IWR1 403 aa13.61□□□□□ -0.23
CHD3-203ENST00000380358 TTC4O95801 387 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 PDE1BQ01064 536 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 DCAF4L1Q3SXM0 396 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 SCARA5Q6ZMJ2 495 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.6□□□□□ -0.232e-6■□□□□ 10
CHD3-203ENST00000380358 PIP4K2CQ8TBX8 421 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms