RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 BACH2Q9BYV9 841 aa13.7□□□□□ -0.22
DEPDC4-202ENST00000378244 VAT1LQ9HCJ6 419 aa13.7□□□□□ -0.22
DEPDC4-202ENST00000378244 FEM1BQ9UK73 627 aa13.7□□□□□ -0.22
DEPDC4-202ENST00000378244 VWA5AO00534 786 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 PARP1P09874 1014 aaKnown RBP13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 APOBRQ0VD83 1088 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 TROAPQ12815 778 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 NOL8Q76FK4 1167 aaKnown RBP13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 CCAR1Q8IX12 1150 aaKnown RBP13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 GPRC5AQ8NFJ5 357 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 BRPF3Q9ULD4 1205 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 CTDP1Q9Y5B0 961 aaPredicted RBP13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 BRCA2P51587 3418 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 SNHG28P0DPA3 235 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 LIFRP42702 1097 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 ERVK-9P63128 1117 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 ERVK-24P63145 666 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 LACTBP83111 547 aaPredicted RBP13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 FAM110CQ1W6H9 321 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 LBX2Q6XYB7 198 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 CMTR1Q8N1G2 835 aaKnown RBP13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 TMTC2Q8N394 836 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 CCDC82Q8N4S0 544 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 CHURC1Q8WUH1 139 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 PORCNQ9H237 461 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 PRR12Q9ULL5 1215 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 CASP8AP2Q9UKL3 1982 aa13.69□□□□□ -0.22
DEPDC4-202ENST00000378244 KLF18A0A0U1RQI7 1052 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 CTGFP29279 349 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 ANAPC15P60006 121 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 TMEM132BQ14DG7 1078 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 CCDC174Q6PII3 467 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 PIBF1Q8WXW3 757 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 RAVER2Q9HCJ3 691 aaKnown RBP13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 PDRG1Q9NUG6 133 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 RABGAP1Q9Y3P9 1069 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 KLRF2D3W0D1 207 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 CNMDO75829 334 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 FMNL1O95466 1100 aaPredicted RBP13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 TAL1P17542 331 aaPredicted RBP13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 PSMC4P43686 418 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 NEK4P51957 841 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 GPATCH4Q5T3I0 446 aaKnown RBP13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 APOA5Q6Q788 366 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 SYNE3Q6ZMZ3 975 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 MTA3Q9BTC8 594 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 TM6SF1Q9BZW5 370 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 EFCC1Q9HA90 598 aa13.68□□□□□ -0.22
DEPDC4-202ENST00000378244 NBPF11Q86T75 865 aa13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 HOMER2Q9NSB8 354 aa13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 MAD2L2Q9UI95 211 aa13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 WDR19Q8NEZ3 1342 aa13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 ZBED4O75132 1171 aa13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 KIF22Q14807 665 aa13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 ASPRV1Q53RT3 343 aa13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 SYDE2Q5VT97 1194 aa13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 FAM160B2Q86V87 743 aa13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 SGMS1Q86VZ5 419 aa13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 NCAPG2Q86XI2 1143 aa13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 CTCFLQ8NI51 663 aaPredicted RBP13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 TRIM47Q96LD4 638 aa13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 SPATC1LQ9H0A9 340 aa13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 CWC22Q9HCG8 908 aaKnown RBP13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 TRIM17Q9Y577 477 aa13.67□□□□□ -0.22
DEPDC4-202ENST00000378244 TNPO2O14787 897 aaKnown RBP13.66□□□□□ -0.22
DEPDC4-202ENST00000378244 PPFIA3O75145 1194 aa13.66□□□□□ -0.22
DEPDC4-202ENST00000378244 TOB2Q14106 344 aaPredicted RBP13.66□□□□□ -0.22
DEPDC4-202ENST00000378244 SNRNP48Q6IEG0 339 aaKnown RBP13.66□□□□□ -0.22
DEPDC4-202ENST00000378244 HOMER1Q86YM7 354 aa13.66□□□□□ -0.22
DEPDC4-202ENST00000378244 ADGRF4Q8IZF3 695 aa13.66□□□□□ -0.22
DEPDC4-202ENST00000378244 AGBL1Q96MI9 1066 aa13.66□□□□□ -0.22
DEPDC4-202ENST00000378244 MOV10L1Q9BXT6 1211 aaKnown RBP13.66□□□□□ -0.22
DEPDC4-202ENST00000378244 MORF4L1Q9UBU8 362 aa13.66□□□□□ -0.22
DEPDC4-202ENST00000378244 ZNF214Q9UL59 606 aaPredicted RBP13.66□□□□□ -0.22
DEPDC4-202ENST00000378244 ADAMTS5Q9UNA0 930 aa13.66□□□□□ -0.22
DEPDC4-202ENST00000378244 RIPK3Q9Y572 518 aa13.66□□□□□ -0.22
DEPDC4-202ENST00000378244 MYPNQ86TC9 1320 aa13.66□□□□□ -0.22
DEPDC4-202ENST00000378244 GOLGA8BA8MQT2 603 aa13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 ZBTB43O43298 467 aa13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 STAT3P40763 770 aa13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 STK3Q13188 491 aa13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 GRM4Q14833 912 aa13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 MB21D1Q8N884 522 aa13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 FANCBQ8NB91 859 aa13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 KIF2CQ99661 725 aa13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 SLC38A10Q9HBR0 1119 aa13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 PALM3A6NDB9 673 aaPredicted RBP13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 DDAH1O94760 285 aa13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 PLEKHA8P1O95397 391 aa13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 ERCC3P19447 782 aa13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 CCT2P78371 535 aaKnown RBP13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 ERO1AQ96HE7 468 aa13.65□□□□□ -0.22
DEPDC4-202ENST00000378244 hCG_1642624A0A1W2PR95 340 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 DTNBO60941 627 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 CCNA1P78396 465 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 NOM1Q5C9Z4 860 aaKnown RBP13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 BTNL9Q6UXG8 535 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 REPS2Q8NFH8 660 aa13.64□□□□□ -0.23
DEPDC4-202ENST00000378244 GTF3C2Q8WUA4 911 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms