RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 BMP15O95972 392 aa18.7■□□□□ 0.58
PCDHA1-201ENST00000378133 PBX1P40424 430 aa18.7■□□□□ 0.58
PCDHA1-201ENST00000378133 C3orf67Q6ZVT6 689 aa18.7■□□□□ 0.58
PCDHA1-201ENST00000378133 TMTC3Q6ZXV5 915 aa18.7■□□□□ 0.58
PCDHA1-201ENST00000378133 ANKRD18AQ8IVF6 992 aa18.7■□□□□ 0.58
PCDHA1-201ENST00000378133 CDCA7Q9BWT1 371 aaPredicted RBP18.7■□□□□ 0.58
PCDHA1-201ENST00000378133 COL1A1P02452 1464 aaPredicted RBP18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 VEGFAP15692 232 aaPredicted RBP18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 CAVIN4Q5BKX8 364 aa18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 ACRBPQ8NEB7 543 aa18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 DOT1LQ8TEK3 1739 aa18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 BRIP1Q9BX63 1249 aa18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 CTNND2Q9UQB3 1225 aa18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 ANKRD65E5RJM6 399 aa18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 ABL1P00519 1130 aa18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 CCT6AP40227 531 aaKnown RBP18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 DDB1Q16531 1140 aa18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 FILIP1LQ4L180 1135 aa18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 FAM47AQ5JRC9 791 aa18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 PIK3AP1Q6ZUJ8 805 aa18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 NOA1Q8NC60 698 aaKnown RBP18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 CTAGE1Q96RT6 745 aa18.69■□□□□ 0.58
PCDHA1-201ENST00000378133 CALM1P0DP23 149 aa18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 CALM2P0DP24 149 aa18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 CALM3P0DP25 149 aa18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 CORO7P57737 925 aa18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 ATP2C1P98194 919 aaPredicted RBP18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 BARGINQ6ZT62 677 aa18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 CNGA4Q8IV77 575 aa18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 PPM1EQ8WY54 764 aa18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 FAM84BQ96KN1 310 aaPredicted RBP18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 JRKLQ9Y4A0 524 aa18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 XDHP47989 1333 aa18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 ADAMTS3O15072 1205 aa18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 NLRP5P59047 1200 aa18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 UBE4AQ14139 1066 aa18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 ERFEQ4G0M1 354 aa18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 FNBP4Q8N3X1 1017 aaPredicted RBP18.68■□□□□ 0.58
PCDHA1-201ENST00000378133 FGRP09769 529 aa18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 MCM7P33993 719 aa18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 FXR1P51114 621 aaKnown RBP eCLIP18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 CTCFLQ8NI51 663 aaPredicted RBP18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 PLEKHA4Q9H4M7 779 aa18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 TAF1P21675 1872 aa18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 CICQ96RK0 1608 aaPredicted RBP18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 CNTNAP5Q8WYK1 1306 aa18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 MYH14Q7Z406 1995 aaKnown RBP18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 RNF40O75150 1001 aa18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 GYPCP04921 128 aa18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 RRAGBQ5VZM2 374 aa18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 MARCH10Q8NA82 808 aaPredicted RBP18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 MYO6Q9UM54 1294 aa18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 MINPP1Q9UNW1 487 aa18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 CACNA1SQ13698 1873 aa18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 DUOX1Q9NRD9 1551 aa18.67■□□□□ 0.58
PCDHA1-201ENST00000378133 DDAH1O94760 285 aa18.66■□□□□ 0.58
PCDHA1-201ENST00000378133 VPS72Q15906 364 aa18.66■□□□□ 0.58
PCDHA1-201ENST00000378133 E2F4Q16254 413 aa18.66■□□□□ 0.58
PCDHA1-201ENST00000378133 IL17AQ16552 155 aa18.66■□□□□ 0.58
PCDHA1-201ENST00000378133 WDR93Q6P2C0 686 aa18.66■□□□□ 0.58
PCDHA1-201ENST00000378133 TMTC1Q8IUR5 882 aa18.66■□□□□ 0.58
PCDHA1-201ENST00000378133 CCDC51Q96ER9 411 aa18.66■□□□□ 0.58
PCDHA1-201ENST00000378133 MTRQ99707 1265 aa18.66■□□□□ 0.58
PCDHA1-201ENST00000378133 FAM98CQ17RN3 349 aaKnown RBP18.66■□□□□ 0.58
PCDHA1-201ENST00000378133 NCAPH2Q6IBW4 605 aa18.66■□□□□ 0.58
PCDHA1-201ENST00000378133 CCDC148Q8NFR7 591 aa18.66■□□□□ 0.58
PCDHA1-201ENST00000378133 VPS16Q9H269 839 aa18.66■□□□□ 0.58
PCDHA1-201ENST00000378133 SEMA3EO15041 775 aa18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 PPFIA4O75335 1185 aa18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 CDC25AP30304 524 aa18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 KRT31Q15323 416 aa18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 AFAP1L1Q8TED9 768 aa18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 BSDC1Q9NW68 430 aaPredicted RBP18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 MYO1AQ9UBC5 1043 aa18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 N4BP3O15049 544 aa18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 SCG2P13521 617 aa18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 KLRK1P26718 216 aa18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 PDXDC2PQ6P474 469 aa18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 CELF1Q92879 486 aaKnown RBP18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 NSUN4Q96CB9 384 aaKnown RBP18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 VIPAS39Q9H9C1 493 aa18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 MAPK8IP1Q9UQF2 711 aa18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.65■□□□□ 0.58
PCDHA1-201ENST00000378133 CLGNO14967 610 aa18.64■□□□□ 0.57
PCDHA1-201ENST00000378133 SYF2O95926 243 aaKnown RBP18.64■□□□□ 0.57
PCDHA1-201ENST00000378133 CYP2D6P10635 497 aa18.64■□□□□ 0.57
PCDHA1-201ENST00000378133 PCP11498 1178 aaKnown RBP18.64■□□□□ 0.57
PCDHA1-201ENST00000378133 MECOMQ03112 1051 aa18.64■□□□□ 0.57
PCDHA1-201ENST00000378133 SKIDA1Q1XH10 827 aa18.64■□□□□ 0.57
PCDHA1-201ENST00000378133 SLC4A8Q2Y0W8 1093 aa18.64■□□□□ 0.57
PCDHA1-201ENST00000378133 DCP1AQ9NPI6 582 aaPredicted RBP18.64■□□□□ 0.57
PCDHA1-201ENST00000378133 USP21Q9UK80 565 aa18.64■□□□□ 0.57
PCDHA1-201ENST00000378133 RNF225M0QZC1 329 aaPredicted RBP18.64■□□□□ 0.57
PCDHA1-201ENST00000378133 ARHGAP25P42331 645 aa18.64■□□□□ 0.57
PCDHA1-201ENST00000378133 ERVK-24P63145 666 aa18.64■□□□□ 0.57
PCDHA1-201ENST00000378133 BICDL1Q6ZP65 573 aa18.64■□□□□ 0.57
PCDHA1-201ENST00000378133 MYH8P13535 1937 aa18.63■□□□□ 0.57
PCDHA1-201ENST00000378133 FECHP22830 423 aa18.63■□□□□ 0.57
PCDHA1-201ENST00000378133 AMPD2Q01433 879 aa18.63■□□□□ 0.57
PCDHA1-201ENST00000378133 DNAJC21Q5F1R6 531 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms