RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 SEC62Q99442 399 aaKnown RBP20.84■□□□□ 0.93
HLA-A-201ENST00000376802 TRIM43BA6NCK2 446 aa20.83■□□□□ 0.93
HLA-A-201ENST00000376802 PGK1P00558 417 aa20.83■□□□□ 0.93
HLA-A-201ENST00000376802 RARBP10826 455 aa20.83■□□□□ 0.93
HLA-A-201ENST00000376802 TDO2P48775 406 aa20.83■□□□□ 0.93
HLA-A-201ENST00000376802 SNRNP48Q6IEG0 339 aaKnown RBP20.83■□□□□ 0.93
HLA-A-201ENST00000376802 PI4K2BQ8TCG2 481 aa20.83■□□□□ 0.93
HLA-A-201ENST00000376802 OTUD7AQ8TE49 926 aaPredicted RBP20.83■□□□□ 0.93
HLA-A-201ENST00000376802 TRIM43Q96BQ3 446 aaPredicted RBP20.83■□□□□ 0.93
HLA-A-201ENST00000376802 CEP95Q96GE4 821 aa20.83■□□□□ 0.93
HLA-A-201ENST00000376802 PDLIM7Q9NR12 457 aa20.83■□□□□ 0.93
HLA-A-201ENST00000376802 MTMR4Q9NYA4 1195 aa20.83■□□□□ 0.93
HLA-A-201ENST00000376802 TTC41PQ6P2S7 1318 aa20.82■□□□□ 0.92
HLA-A-201ENST00000376802 SNAI1O95863 264 aaPredicted RBP20.82■□□□□ 0.92
HLA-A-201ENST00000376802 APPP05067 770 aa20.82■□□□□ 0.92
HLA-A-201ENST00000376802 SHHQ15465 462 aa20.82■□□□□ 0.92
HLA-A-201ENST00000376802 FAM109BQ6ICB4 259 aaPredicted RBP20.82■□□□□ 0.92
HLA-A-201ENST00000376802 ZNF444Q8N0Y2 327 aaPredicted RBP20.82■□□□□ 0.92
HLA-A-201ENST00000376802 LENG1Q96BZ8 264 aaPredicted RBP20.82■□□□□ 0.92
HLA-A-201ENST00000376802 PRDM5Q9NQX1 630 aaPredicted RBP20.82■□□□□ 0.92
HLA-A-201ENST00000376802 UNC80Q8N2C7 3258 aa20.82■□□□□ 0.92
HLA-A-201ENST00000376802 ITGB8P26012 769 aa20.81■□□□□ 0.92
HLA-A-201ENST00000376802 TLE2Q04725 743 aa20.81■□□□□ 0.92
HLA-A-201ENST00000376802 C9orf50Q5SZB4 431 aa20.81■□□□□ 0.92
HLA-A-201ENST00000376802 MAMDC4Q6UXC1 1216 aa20.81■□□□□ 0.92
HLA-A-201ENST00000376802 CPXCR1Q8N123 301 aa20.81■□□□□ 0.92
HLA-A-201ENST00000376802 MSL3Q8N5Y2 521 aaKnown RBP20.81■□□□□ 0.92
HLA-A-201ENST00000376802 BADQ92934 168 aa20.81■□□□□ 0.92
HLA-A-201ENST00000376802 ADAMTS4O75173 837 aa20.8■□□□□ 0.92
HLA-A-201ENST00000376802 AKR1A1P14550 325 aa20.8■□□□□ 0.92
HLA-A-201ENST00000376802 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.8■□□□□ 0.92
HLA-A-201ENST00000376802 RNF180Q86T96 592 aa20.8■□□□□ 0.92
HLA-A-201ENST00000376802 GMCL1P1Q8NEA9 526 aa20.8■□□□□ 0.92
HLA-A-201ENST00000376802 KIFC2Q96AC6 838 aa20.8■□□□□ 0.92
HLA-A-201ENST00000376802 SLC38A10Q9HBR0 1119 aa20.8■□□□□ 0.92
HLA-A-201ENST00000376802 ZNF287Q9HBT7 754 aa20.8■□□□□ 0.92
HLA-A-201ENST00000376802 RAVER2Q9HCJ3 691 aaKnown RBP20.8■□□□□ 0.92
HLA-A-201ENST00000376802 SYNPO2Q9UMS6 1093 aa20.8■□□□□ 0.92
HLA-A-201ENST00000376802 CNPY2Q9Y2B0 182 aa20.8■□□□□ 0.92
HLA-A-201ENST00000376802 CUL9Q8IWT3 2517 aa20.8■□□□□ 0.92
HLA-A-201ENST00000376802 PLIN4Q96Q06 1357 aa20.8■□□□□ 0.92
HLA-A-201ENST00000376802 SYNGAP1Q96PV0 1343 aa20.8■□□□□ 0.92
HLA-A-201ENST00000376802 DLL1O00548 723 aa20.79■□□□□ 0.92
HLA-A-201ENST00000376802 FOXP2O15409 715 aa20.79■□□□□ 0.92
HLA-A-201ENST00000376802 TTLL1O95922 423 aa20.79■□□□□ 0.92
HLA-A-201ENST00000376802 ZMYM1Q5SVZ6 1142 aa20.79■□□□□ 0.92
HLA-A-201ENST00000376802 LRRC47Q8N1G4 583 aaKnown RBP20.79■□□□□ 0.92
HLA-A-201ENST00000376802 NEDD1Q8NHV4 660 aa20.79■□□□□ 0.92
HLA-A-201ENST00000376802 DDX11Q96FC9 970 aa20.79■□□□□ 0.92
HLA-A-201ENST00000376802 FGD4Q96M96 766 aa20.79■□□□□ 0.92
HLA-A-201ENST00000376802 GUCD1Q96NT3 240 aa20.79■□□□□ 0.92
HLA-A-201ENST00000376802 FEM1BQ9UK73 627 aa20.79■□□□□ 0.92
HLA-A-201ENST00000376802 A0A1W2PQ45 241 aaPredicted RBP20.78■□□□□ 0.92
HLA-A-201ENST00000376802 A0A1W2PQY0 241 aa20.78■□□□□ 0.92
HLA-A-201ENST00000376802 ZBED4O75132 1171 aa20.78■□□□□ 0.92
HLA-A-201ENST00000376802 SLC4A3P48751 1232 aa20.78■□□□□ 0.92
HLA-A-201ENST00000376802 LRRFIP1Q32MZ4 808 aaKnown RBP20.78■□□□□ 0.92
HLA-A-201ENST00000376802 CCSAPQ6IQ19 270 aaPredicted RBP20.78■□□□□ 0.92
HLA-A-201ENST00000376802 ZNF467Q7Z7K2 595 aaPredicted RBP20.78■□□□□ 0.92
HLA-A-201ENST00000376802 SYNRGQ9UMZ2 1314 aa20.78■□□□□ 0.92
HLA-A-201ENST00000376802 ERC2O15083 957 aa20.78■□□□□ 0.92
HLA-A-201ENST00000376802 KLHDC9Q8NEP7 349 aa20.78■□□□□ 0.92
HLA-A-201ENST00000376802 TSEN34Q9BSV6 310 aaKnown RBP20.78■□□□□ 0.92
HLA-A-201ENST00000376802 NACAP1Q9BZK3 213 aa20.78■□□□□ 0.92
HLA-A-201ENST00000376802 TACC3Q9Y6A5 838 aa20.78■□□□□ 0.92
HLA-A-201ENST00000376802 EYSQ5T1H1 3165 aa20.77■□□□□ 0.92
HLA-A-201ENST00000376802 SALL3Q9BXA9 1300 aa20.77■□□□□ 0.92
HLA-A-201ENST00000376802 ADCY6O43306 1168 aa20.77■□□□□ 0.91
HLA-A-201ENST00000376802 TSPY3P0CV98 308 aa20.77■□□□□ 0.91
HLA-A-201ENST00000376802 TSPY8P0CW00 308 aa20.77■□□□□ 0.91
HLA-A-201ENST00000376802 OAZ1P54368 228 aa20.77■□□□□ 0.91
HLA-A-201ENST00000376802 TFAP4Q01664 338 aa20.77■□□□□ 0.91
HLA-A-201ENST00000376802 PDE4BQ07343 736 aa20.77■□□□□ 0.91
HLA-A-201ENST00000376802 PPARAQ07869 468 aa20.77■□□□□ 0.91
HLA-A-201ENST00000376802 SLFN13Q68D06 897 aa20.77■□□□□ 0.91
HLA-A-201ENST00000376802 FSD1Q9BTV5 496 aa20.77■□□□□ 0.91
HLA-A-201ENST00000376802 FAM184BQ9ULE4 1060 aa20.77■□□□□ 0.91
HLA-A-201ENST00000376802 CDH23Q9H251 3354 aa20.76■□□□□ 0.91
HLA-A-201ENST00000376802 KIAA0355O15063 1070 aa20.76■□□□□ 0.91
HLA-A-201ENST00000376802 CLTBP09497 229 aa20.76■□□□□ 0.91
HLA-A-201ENST00000376802 BMP3P12645 472 aa20.76■□□□□ 0.91
HLA-A-201ENST00000376802 ACLYP53396 1101 aa20.76■□□□□ 0.91
HLA-A-201ENST00000376802 IRX5P78411 483 aaPredicted RBP20.76■□□□□ 0.91
HLA-A-201ENST00000376802 FAM161BQ96MY7 647 aa20.76■□□□□ 0.91
HLA-A-201ENST00000376802 NAPBQ9H115 298 aa20.76■□□□□ 0.91
HLA-A-201ENST00000376802 INCENPQ9NQS7 918 aa20.76■□□□□ 0.91
HLA-A-201ENST00000376802 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.76■□□□□ 0.91
HLA-A-201ENST00000376802 MYADML2A6NDP7 307 aa20.75■□□□□ 0.91
HLA-A-201ENST00000376802 TMEM232C9JQI7 657 aa20.75■□□□□ 0.91
HLA-A-201ENST00000376802 DUSP11O75319 330 aaKnown RBP20.75■□□□□ 0.91
HLA-A-201ENST00000376802 MX1P20591 662 aa20.75■□□□□ 0.91
HLA-A-201ENST00000376802 EPHB4P54760 987 aa20.75■□□□□ 0.91
HLA-A-201ENST00000376802 ACVR2BQ13705 512 aa20.75■□□□□ 0.91
HLA-A-201ENST00000376802 KCNA10Q16322 511 aa20.75■□□□□ 0.91
HLA-A-201ENST00000376802 ANKRD33Q7Z3H0 272 aa20.75■□□□□ 0.91
HLA-A-201ENST00000376802 CHST13Q8NET6 341 aa20.75■□□□□ 0.91
HLA-A-201ENST00000376802 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.75■□□□□ 0.91
HLA-A-201ENST00000376802 FBXO40Q9UH90 709 aa20.75■□□□□ 0.91
HLA-A-201ENST00000376802 CTDP1Q9Y5B0 961 aaPredicted RBP20.75■□□□□ 0.91
HLA-A-201ENST00000376802 PQBP1O60828 265 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms