RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 SLC4A3P48751 1232 aa16.9■□□□□ 0.3
NELFE-201ENST00000375425 B4GALNT3Q6L9W6 998 aa16.9■□□□□ 0.3
NELFE-201ENST00000375425 TINF2Q9BSI4 451 aa16.9■□□□□ 0.3
NELFE-201ENST00000375425 CTDP1Q9Y5B0 961 aaPredicted RBP16.9■□□□□ 0.3
NELFE-201ENST00000375425 ALPK3Q96L96 1907 aa16.9■□□□□ 0.3
NELFE-201ENST00000375425 GREB1LQ9C091 1923 aaPredicted RBP16.9■□□□□ 0.3
NELFE-201ENST00000375425 TSPY2A6NKD2 308 aa16.89■□□□□ 0.29
NELFE-201ENST00000375425 ATP2A1O14983 1001 aa16.89■□□□□ 0.29
NELFE-201ENST00000375425 MYCNP04198 464 aaPredicted RBP16.89■□□□□ 0.29
NELFE-201ENST00000375425 MAGEA10P43363 369 aaPredicted RBP16.89■□□□□ 0.29
NELFE-201ENST00000375425 ATN1P54259 1190 aaPredicted RBP16.89■□□□□ 0.29
NELFE-201ENST00000375425 MCMDC2Q4G0Z9 681 aa16.89■□□□□ 0.29
NELFE-201ENST00000375425 FAM227BQ96M60 508 aa16.89■□□□□ 0.29
NELFE-201ENST00000375425 SLC38A10Q9HBR0 1119 aa16.89■□□□□ 0.29
NELFE-201ENST00000375425 RAVER2Q9HCJ3 691 aaKnown RBP16.89■□□□□ 0.29
NELFE-201ENST00000375425 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.89■□□□□ 0.29
NELFE-201ENST00000375425 PLIN4Q96Q06 1357 aa16.89■□□□□ 0.29
NELFE-201ENST00000375425 LAMA2P24043 3122 aaKnown RBP16.89■□□□□ 0.29
NELFE-201ENST00000375425 ZNF236Q9UL36 1845 aa16.89■□□□□ 0.29
NELFE-201ENST00000375425 TMEM232C9JQI7 657 aa16.88■□□□□ 0.29
NELFE-201ENST00000375425 IGHDP01880 384 aa16.88■□□□□ 0.29
NELFE-201ENST00000375425 ALX1Q15699 326 aa16.88■□□□□ 0.29
NELFE-201ENST00000375425 SMC5Q8IY18 1101 aa16.88■□□□□ 0.29
NELFE-201ENST00000375425 CHMP4CQ96CF2 233 aa16.88■□□□□ 0.29
NELFE-201ENST00000375425 DDX11Q96FC9 970 aa16.88■□□□□ 0.29
NELFE-201ENST00000375425 IL17RBQ9NRM6 502 aa16.88■□□□□ 0.29
NELFE-201ENST00000375425 NRBP1Q9UHY1 535 aa16.88■□□□□ 0.29
NELFE-201ENST00000375425 ANAPC4Q9UJX5 808 aa16.88■□□□□ 0.29
NELFE-201ENST00000375425 STX8Q9UNK0 236 aa16.88■□□□□ 0.29
NELFE-201ENST00000375425 TACC3Q9Y6A5 838 aa16.88■□□□□ 0.29
NELFE-201ENST00000375425 PARP14Q460N5 1801 aa16.88■□□□□ 0.29
NELFE-201ENST00000375425 A0A0D9SFI3 127 aa16.87■□□□□ 0.29
NELFE-201ENST00000375425 TRIM6-TRIM34B2RNG4 842 aa16.87■□□□□ 0.29
NELFE-201ENST00000375425 KBTBD13C9JR72 458 aa16.87■□□□□ 0.29
NELFE-201ENST00000375425 NMT2O60551 498 aa16.87■□□□□ 0.29
NELFE-201ENST00000375425 FGAP02671 866 aa16.87■□□□□ 0.29
NELFE-201ENST00000375425 TAL1P17542 331 aaPredicted RBP16.87■□□□□ 0.29
NELFE-201ENST00000375425 MCCP23508 829 aa16.87■□□□□ 0.29
NELFE-201ENST00000375425 SLC1A4P43007 532 aa16.87■□□□□ 0.29
NELFE-201ENST00000375425 PPP4R3BQ5MIZ7 849 aa16.87■□□□□ 0.29
NELFE-201ENST00000375425 TICAM2Q86XR7 235 aa16.87■□□□□ 0.29
NELFE-201ENST00000375425 ISY1Q9ULR0 285 aaKnown RBP16.87■□□□□ 0.29
NELFE-201ENST00000375425 RANBP6O60518 1105 aaKnown RBP16.87■□□□□ 0.29
NELFE-201ENST00000375425 LRRC41Q15345 812 aa16.87■□□□□ 0.29
NELFE-201ENST00000375425 EXOC6Q8TAG9 804 aa16.87■□□□□ 0.29
NELFE-201ENST00000375425 RILPL2Q969X0 211 aa16.87■□□□□ 0.29
NELFE-201ENST00000375425 COL11A1P12107 1806 aaPredicted RBP16.86■□□□□ 0.29
NELFE-201ENST00000375425 DNAJC25-GNG10A0A024R161 153 aa16.86■□□□□ 0.29
NELFE-201ENST00000375425 SOX1O00570 391 aaPredicted RBP16.86■□□□□ 0.29
NELFE-201ENST00000375425 FGRP09769 529 aa16.86■□□□□ 0.29
NELFE-201ENST00000375425 ZNF865P0CJ78 1059 aaPredicted RBP16.86■□□□□ 0.29
NELFE-201ENST00000375425 HSPD1P10809 573 aaKnown RBP16.86■□□□□ 0.29
NELFE-201ENST00000375425 RARBP10826 455 aa16.86■□□□□ 0.29
NELFE-201ENST00000375425 STAT2P52630 851 aa16.86■□□□□ 0.29
NELFE-201ENST00000375425 OAZ1P54368 228 aa16.86■□□□□ 0.29
NELFE-201ENST00000375425 NMIQ13287 307 aaPredicted RBP16.86■□□□□ 0.29
NELFE-201ENST00000375425 SLC39A5Q6ZMH5 540 aa16.86■□□□□ 0.29
NELFE-201ENST00000375425 CHD1LQ86WJ1 897 aa16.86■□□□□ 0.29
NELFE-201ENST00000375425 ANKRD35Q8N283 1001 aa16.86■□□□□ 0.29
NELFE-201ENST00000375425 CHURC1Q8WUH1 139 aa16.86■□□□□ 0.29
NELFE-201ENST00000375425 STAG1Q8WVM7 1258 aa16.86■□□□□ 0.29
NELFE-201ENST00000375425 GMCL1Q96IK5 515 aa16.86■□□□□ 0.29
NELFE-201ENST00000375425 UBE2OQ9C0C9 1292 aaKnown RBP16.86■□□□□ 0.29
NELFE-201ENST00000375425 CNPY2Q9Y2B0 182 aa16.86■□□□□ 0.29
NELFE-201ENST00000375425 ZNFX1Q9P2E3 1918 aaKnown RBP16.85■□□□□ 0.29
NELFE-201ENST00000375425 ORC4O43929 436 aa16.85■□□□□ 0.29
NELFE-201ENST00000375425 FDX1P10109 184 aa16.85■□□□□ 0.29
NELFE-201ENST00000375425 ADCYAP1R1P41586 468 aa16.85■□□□□ 0.29
NELFE-201ENST00000375425 RTP1P59025 263 aa16.85■□□□□ 0.29
NELFE-201ENST00000375425 MDM2Q00987 491 aaPredicted RBP16.85■□□□□ 0.29
NELFE-201ENST00000375425 IKQ13123 557 aaPredicted RBP16.85■□□□□ 0.29
NELFE-201ENST00000375425 KCTD1Q719H9 257 aa16.85■□□□□ 0.29
NELFE-201ENST00000375425 ZNF589Q86UQ0 364 aaPredicted RBP16.85■□□□□ 0.29
NELFE-201ENST00000375425 FAM160B2Q86V87 743 aa16.85■□□□□ 0.29
NELFE-201ENST00000375425 PLEKHM2Q8IWE5 1019 aa16.85■□□□□ 0.29
NELFE-201ENST00000375425 MSL3Q8N5Y2 521 aaKnown RBP16.85■□□□□ 0.29
NELFE-201ENST00000375425 CHST13Q8NET6 341 aa16.85■□□□□ 0.29
NELFE-201ENST00000375425 LRCH3Q96II8 777 aa16.85■□□□□ 0.29
NELFE-201ENST00000375425 XPNPEP3Q9NQH7 507 aa16.85■□□□□ 0.29
NELFE-201ENST00000375425 FBXO40Q9UH90 709 aa16.85■□□□□ 0.29
NELFE-201ENST00000375425 SNAI1O95863 264 aaPredicted RBP16.84■□□□□ 0.29
NELFE-201ENST00000375425 PGK1P00558 417 aa16.84■□□□□ 0.29
NELFE-201ENST00000375425 AKR1A1P14550 325 aa16.84■□□□□ 0.29
NELFE-201ENST00000375425 NOVP48745 357 aa16.84■□□□□ 0.29
NELFE-201ENST00000375425 NUCB1Q02818 461 aa16.84■□□□□ 0.29
NELFE-201ENST00000375425 RCSD1Q6JBY9 416 aa16.84■□□□□ 0.29
NELFE-201ENST00000375425 MAMDC4Q6UXC1 1216 aa16.84■□□□□ 0.29
NELFE-201ENST00000375425 FERMT2Q96AC1 680 aa16.84■□□□□ 0.29
NELFE-201ENST00000375425 TOMM22Q9NS69 142 aa16.84■□□□□ 0.29
NELFE-201ENST00000375425 ATP11BQ9Y2G3 1177 aa16.84■□□□□ 0.29
NELFE-201ENST00000375425 SYNGAP1Q96PV0 1343 aa16.83■□□□□ 0.29
NELFE-201ENST00000375425 MYH4Q9Y623 1939 aa16.83■□□□□ 0.28
NELFE-201ENST00000375425 PLA2G6O60733 806 aa16.83■□□□□ 0.28
NELFE-201ENST00000375425 SDSP20132 328 aa16.83■□□□□ 0.28
NELFE-201ENST00000375425 RRP12Q5JTH9 1297 aaKnown RBP16.83■□□□□ 0.28
NELFE-201ENST00000375425 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.83■□□□□ 0.28
NELFE-201ENST00000375425 ZNF467Q7Z7K2 595 aaPredicted RBP16.83■□□□□ 0.28
NELFE-201ENST00000375425 RNF180Q86T96 592 aa16.83■□□□□ 0.28
NELFE-201ENST00000375425 TDHQ8IZJ6 230 aa16.83■□□□□ 0.28
NELFE-201ENST00000375425 AGBL1Q96MI9 1066 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms