RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 NLRX1Q86UT6 975 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 SMYD4Q8IYR2 804 aaPredicted RBP20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 PPP1R9BQ96SB3 815 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 BRIP1Q9BX63 1249 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 NLRC4Q9NPP4 1024 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 POLR3EQ9NVU0 708 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 CSF1RP07333 972 aa20.04■□□□□ 0.8
PTPDC1-202ENST00000375360 AOC3Q16853 763 aa20.04■□□□□ 0.8
PTPDC1-202ENST00000375360 EXOC3O60645 756 aa20.04■□□□□ 0.8
PTPDC1-202ENST00000375360 FNBP1Q96RU3 617 aa20.04■□□□□ 0.8
PTPDC1-202ENST00000375360 PRDM10Q9NQV6 1147 aa20.04■□□□□ 0.8
PTPDC1-202ENST00000375360 TAF6LQ9Y6J9 622 aa20.04■□□□□ 0.8
PTPDC1-202ENST00000375360 IQSEC2Q5JU85 1478 aa20.04■□□□□ 0.8
PTPDC1-202ENST00000375360 SPATA31A5Q5VU36 1347 aa20.04■□□□□ 0.8
PTPDC1-202ENST00000375360 SPATA31A7Q8IWB4 1347 aa20.04■□□□□ 0.8
PTPDC1-202ENST00000375360 SLU7O95391 586 aaKnown RBP20.04■□□□□ 0.8
PTPDC1-202ENST00000375360 CGNQ9P2M7 1197 aaKnown RBP20.04■□□□□ 0.8
PTPDC1-202ENST00000375360 SWAP70Q9UH65 585 aa20.04■□□□□ 0.8
PTPDC1-202ENST00000375360 KIAA1210Q9ULL0 1709 aa20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 RFX5P48382 616 aaPredicted RBP20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 SETQ01105 290 aaPredicted RBP20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 PPP1R2P41236 205 aa20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 MCM6Q14566 821 aa20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 IFI16Q16666 785 aaKnown RBP20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 DPCR1Q3MIW9 517 aa20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 ASPRV1Q53RT3 343 aa20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 PRR5LQ6MZQ0 368 aa20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 MRPL11Q9Y3B7 192 aaKnown RBP20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 NKX1-1Q15270 411 aaPredicted RBP20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 PLA2G4DQ86XP0 818 aa20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 ENAHQ8N8S7 591 aaPredicted RBP20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 PCDHA4Q9UN74 947 aa20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 A0A1W2PQ27 194 aa20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 A0A1W2PQ64 194 aa20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 A0A1W2PQD8 194 aa20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 DALRD3Q5D0E6 543 aaKnown RBP20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 STAG1Q8WVM7 1258 aa20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 NT5C3AQ9H0P0 336 aa20.03■□□□□ 0.8
PTPDC1-202ENST00000375360 GH2P01242 217 aa20.02■□□□□ 0.8
PTPDC1-202ENST00000375360 CRKP46108 304 aa20.02■□□□□ 0.8
PTPDC1-202ENST00000375360 SLC27A3Q5K4L6 730 aa20.02■□□□□ 0.8
PTPDC1-202ENST00000375360 GADL1Q6ZQY3 521 aa20.02■□□□□ 0.8
PTPDC1-202ENST00000375360 ANKRD35Q8N283 1001 aa20.02■□□□□ 0.8
PTPDC1-202ENST00000375360 BMP3P12645 472 aa20.02■□□□□ 0.79
PTPDC1-202ENST00000375360 UBE2SQ16763 222 aa20.02■□□□□ 0.79
PTPDC1-202ENST00000375360 ARHGEF16Q5VV41 709 aa20.02■□□□□ 0.79
PTPDC1-202ENST00000375360 MB21D2Q8IYB1 491 aaPredicted RBP20.02■□□□□ 0.79
PTPDC1-202ENST00000375360 ZFP91Q96JP5 570 aaPredicted RBP20.02■□□□□ 0.79
PTPDC1-202ENST00000375360 IFT74Q96LB3 600 aa20.02■□□□□ 0.79
PTPDC1-202ENST00000375360 PLA2G12BQ9BX93 195 aa20.02■□□□□ 0.79
PTPDC1-202ENST00000375360 DHX36Q9H2U1 1008 aaKnown RBP20.02■□□□□ 0.79
PTPDC1-202ENST00000375360 CDC27P30260 824 aa20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 MIER3Q7Z3K6 550 aa20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 GLG1Q92896 1179 aa20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 DNAI2Q9GZS0 605 aa20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 ZNF277Q9NRM2 450 aaPredicted RBP20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 KIAA0753Q2KHM9 967 aa20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 CIAPIN1Q6FI81 312 aa20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 GALNT17Q6IS24 598 aa20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 DGKHQ86XP1 1220 aa20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 EPSTI1Q96J88 318 aa20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 KIAA1024Q9UPX6 916 aa20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 DYNC1I1O14576 645 aa20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 RNASE9P60153 205 aaKnown RBP20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 TMEM47Q9BQJ4 181 aa20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 KDM4FA0A1W2PPD8 638 aa20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 CTR9Q6PD62 1173 aa20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 DCPSQ96C86 337 aaKnown RBP20.01■□□□□ 0.79
PTPDC1-202ENST00000375360 PRPF3O43395 683 aaKnown RBP20■□□□□ 0.79
PTPDC1-202ENST00000375360 RHOXF2BP0C7M4 288 aa20■□□□□ 0.79
PTPDC1-202ENST00000375360 EEF2P13639 858 aaKnown RBP20■□□□□ 0.79
PTPDC1-202ENST00000375360 NCBP1Q09161 790 aaKnown RBP20■□□□□ 0.79
PTPDC1-202ENST00000375360 PODNQ7Z5L7 613 aa20■□□□□ 0.79
PTPDC1-202ENST00000375360 SLF1Q9BQI6 1058 aa20■□□□□ 0.79
PTPDC1-202ENST00000375360 RHOXF2Q9BQY4 288 aa20■□□□□ 0.79
PTPDC1-202ENST00000375360 MEGF6O75095 1541 aa20■□□□□ 0.79
PTPDC1-202ENST00000375360 RRP9O43818 475 aaKnown RBP20■□□□□ 0.79
PTPDC1-202ENST00000375360 NTSR2O95665 410 aa20■□□□□ 0.79
PTPDC1-202ENST00000375360 AS3MTQ9HBK9 375 aa20■□□□□ 0.79
PTPDC1-202ENST00000375360 SF3B3Q15393 1217 aaKnown RBP20■□□□□ 0.79
PTPDC1-202ENST00000375360 CWC15Q9P013 229 aaKnown RBP20■□□□□ 0.79
PTPDC1-202ENST00000375360 PABPC4Q13310 644 aaKnown RBP eCLIP19.99■□□□□ 0.79
PTPDC1-202ENST00000375360 SPECC1LQ69YQ0 1117 aa19.99■□□□□ 0.79
PTPDC1-202ENST00000375360 A0A0G2JLW4 131 aa19.99■□□□□ 0.79
PTPDC1-202ENST00000375360 KRT5P13647 590 aa19.99■□□□□ 0.79
PTPDC1-202ENST00000375360 CACNB1Q02641 598 aaPredicted RBP19.99■□□□□ 0.79
PTPDC1-202ENST00000375360 AZI2Q9H6S1 392 aa19.99■□□□□ 0.79
PTPDC1-202ENST00000375360 PSMB7Q99436 277 aa19.99■□□□□ 0.79
PTPDC1-202ENST00000375360 PIM2Q9P1W9 311 aa19.99■□□□□ 0.79
PTPDC1-202ENST00000375360 ZDHHC9Q9Y397 364 aa19.99■□□□□ 0.79
PTPDC1-202ENST00000375360 MAP2P11137 1827 aaKnown RBP19.99■□□□□ 0.79
PTPDC1-202ENST00000375360 ECE2O60344 883 aa19.99■□□□□ 0.79
PTPDC1-202ENST00000375360 MCM3P25205 808 aa19.99■□□□□ 0.79
PTPDC1-202ENST00000375360 TBC1D10BQ4KMP7 808 aaPredicted RBP19.99■□□□□ 0.79
PTPDC1-202ENST00000375360 C11orf57Q6ZUT1 292 aaPredicted RBP19.99■□□□□ 0.79
PTPDC1-202ENST00000375360 TERF1P54274 439 aa19.98■□□□□ 0.79
PTPDC1-202ENST00000375360 LY9Q9HBG7 655 aa19.98■□□□□ 0.79
PTPDC1-202ENST00000375360 PPP6R2O75170 966 aa19.98■□□□□ 0.79
PTPDC1-202ENST00000375360 RPN1P04843 607 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms