RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 EHD4Q9H223 541 aa15.13■□□□□ 0.01
A1CF-204ENST00000373997 DHX36Q9H2U1 1008 aaKnown RBP15.13■□□□□ 0.01
A1CF-204ENST00000373997 DNAJC18Q9H819 358 aa15.13■□□□□ 0.01
A1CF-204ENST00000373997 TMOD2Q9NZR1 351 aa15.13■□□□□ 0.01
A1CF-204ENST00000373997 VPS54Q9P1Q0 977 aa15.13■□□□□ 0.01
A1CF-204ENST00000373997 A0A087WWV3 80 aa15.13■□□□□ 0.01
A1CF-204ENST00000373997 ZNF202O95125 648 aa15.13■□□□□ 0.01
A1CF-204ENST00000373997 MMP1P03956 469 aa15.13■□□□□ 0.01
A1CF-204ENST00000373997 AXDND1Q5T1B0 1012 aaPredicted RBP15.13■□□□□ 0.01
A1CF-204ENST00000373997 MAD2L2Q9UI95 211 aa15.13■□□□□ 0.01
A1CF-204ENST00000373997 SBF1O95248 1867 aa15.12■□□□□ 0.01
A1CF-204ENST00000373997 SPDYE4A6NLX3 237 aa15.12■□□□□ 0.01
A1CF-204ENST00000373997 TOP1P11387 765 aaKnown RBP15.12■□□□□ 0.01
A1CF-204ENST00000373997 SLC39A14Q15043 492 aa15.12■□□□□ 0.01
A1CF-204ENST00000373997 SAFBQ15424 915 aaKnown RBP eCLIP15.12■□□□□ 0.01
A1CF-204ENST00000373997 LRRC47Q8N1G4 583 aaKnown RBP15.12■□□□□ 0.01
A1CF-204ENST00000373997 JMYQ8N9B5 988 aa15.12■□□□□ 0.01
A1CF-204ENST00000373997 AGBL3Q8NEM8 1001 aa15.12■□□□□ 0.01
A1CF-204ENST00000373997 ZNF397Q8NF99 534 aaPredicted RBP15.12■□□□□ 0.01
A1CF-204ENST00000373997 PI4KBQ9UBF8 816 aa15.12■□□□□ 0.01
A1CF-204ENST00000373997 DDX41Q9UJV9 622 aaKnown RBP15.12■□□□□ 0.01
A1CF-204ENST00000373997 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.11■□□□□ 0.01
A1CF-204ENST00000373997 SHTN1A0MZ66 631 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 GOLGA8HP0CJ92 632 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 DIS3L2Q8IYB7 885 aaKnown RBP15.11■□□□□ 0.01
A1CF-204ENST00000373997 ERCC4Q92889 916 aaPredicted RBP15.11■□□□□ 0.01
A1CF-204ENST00000373997 SHISA4Q96DD7 197 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 XPO4Q9C0E2 1151 aaKnown RBP15.11■□□□□ 0.01
A1CF-204ENST00000373997 VEZTQ9HBM0 779 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 MTMR4Q9NYA4 1195 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 ZNF70Q9UC06 446 aaPredicted RBP15.11■□□□□ 0.01
A1CF-204ENST00000373997 BTBD18B2RXH4 712 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 PPP6R2O75170 966 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 ENTPD3O75355 529 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 NPM3O75607 178 aaKnown RBP15.11■□□□□ 0.01
A1CF-204ENST00000373997 KIF20AO95235 890 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 SMC2O95347 1197 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 PFKFB1P16118 471 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 SFPQP23246 707 aaKnown RBP eCLIP15.11■□□□□ 0.01
A1CF-204ENST00000373997 SHROOM1Q2M3G4 852 aaPredicted RBP15.11■□□□□ 0.01
A1CF-204ENST00000373997 MAP3K14Q99558 947 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 IFNKQ9P0W0 207 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 ATAD5Q96QE3 1844 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 ATRNL1Q5VV63 1379 aa15.11■□□□□ 0.01
A1CF-204ENST00000373997 COL2A1P02458 1487 aaPredicted RBP15.1■□□□□ 0.01
A1CF-204ENST00000373997 IGKV6D-41A0A0C4DH26 115 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 FAM237AA0A1B0GTK4 181 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 CCP110O43303 1012 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 MYO1BO43795 1136 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 SLU7O95391 586 aaKnown RBP15.1■□□□□ 0.01
A1CF-204ENST00000373997 XBP1P17861 261 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 PRELPP51888 382 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 ATP2B2Q01814 1243 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 NCAPHQ15003 741 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 SPON1Q9HCB6 807 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 TRMT1Q9NXH9 659 aaKnown RBP15.1■□□□□ 0.01
A1CF-204ENST00000373997 ZNF215Q9UL58 517 aaPredicted RBP15.1■□□□□ 0.01
A1CF-204ENST00000373997 MORC2Q9Y6X9 1032 aaPredicted RBP15.1■□□□□ 0.01
A1CF-204ENST00000373997 LTBP3Q9NS15 1303 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 NR5A1Q13285 461 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 SPDYE2Q495Y8 402 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 USP17L2Q6R6M4 530 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 TMC6Q7Z403 805 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 CSRNP1Q96S65 589 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 CPVLQ9H3G5 476 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 TUBE1Q9UJT0 475 aa15.1■□□□□ 0.01
A1CF-204ENST00000373997 PARP1P09874 1014 aaKnown RBP15.09■□□□□ 0.01
A1CF-204ENST00000373997 SCG2P13521 617 aa15.09■□□□□ 0.01
A1CF-204ENST00000373997 GNAQP50148 359 aa15.09■□□□□ 0.01
A1CF-204ENST00000373997 GABPB1Q06547 395 aaPredicted RBP15.09■□□□□ 0.01
A1CF-204ENST00000373997 TNIP1Q15025 636 aa15.09■□□□□ 0.01
A1CF-204ENST00000373997 CERKLQ49MI3 558 aaPredicted RBP15.09■□□□□ 0.01
A1CF-204ENST00000373997 E4F1Q66K89 784 aaPredicted RBP15.09■□□□□ 0.01
A1CF-204ENST00000373997 ARMCX5Q6P1M9 558 aa15.09■□□□□ 0.01
A1CF-204ENST00000373997 NOSTRINQ8IVI9 506 aa15.09■□□□□ 0.01
A1CF-204ENST00000373997 OXER1Q8TDS5 423 aa15.09■□□□□ 0.01
A1CF-204ENST00000373997 L2HGDHQ9H9P8 463 aa15.09■□□□□ 0.01
A1CF-204ENST00000373997 HPSEQ9Y251 543 aa15.09■□□□□ 0.01
A1CF-204ENST00000373997 FRMPD2Q68DX3 1309 aaPredicted RBP15.09■□□□□ 0.01
A1CF-204ENST00000373997 PALM3A6NDB9 673 aaPredicted RBP15.08■□□□□ 0.01
A1CF-204ENST00000373997 USP17L5A8MUK1 530 aa15.08■□□□□ 0.01
A1CF-204ENST00000373997 CBFA2T2O43439 604 aa15.08■□□□□ 0.01
A1CF-204ENST00000373997 GDF11O95390 407 aa15.08■□□□□ 0.01
A1CF-204ENST00000373997 TTLL1O95922 423 aa15.08■□□□□ 0.01
A1CF-204ENST00000373997 VEGFAP15692 232 aaPredicted RBP15.08■□□□□ 0.01
A1CF-204ENST00000373997 SYKP43405 635 aa15.08■□□□□ 0.01
A1CF-204ENST00000373997 NOVP48745 357 aa15.08■□□□□ 0.01
A1CF-204ENST00000373997 TMEM132AQ24JP5 1023 aa15.08■□□□□ 0.01
A1CF-204ENST00000373997 SLC35G1Q2M3R5 365 aa15.08■□□□□ 0.01
A1CF-204ENST00000373997 GPKOWQ92917 476 aaPredicted RBP eCLIP15.08■□□□□ 0.01
A1CF-204ENST00000373997 PPP1R13BQ96KQ4 1090 aa15.08■□□□□ 0.01
A1CF-204ENST00000373997 PHF20Q9BVI0 1012 aa15.08■□□□□ 0.01
A1CF-204ENST00000373997 GJA3Q9Y6H8 435 aa15.08■□□□□ 0.01
A1CF-204ENST00000373997 CNTNAP1P78357 1384 aa15.08■□□□□ 0.01
A1CF-204ENST00000373997 KLRF2D3W0D1 207 aa15.08■□□□□ 0
A1CF-204ENST00000373997 NAA30Q147X3 362 aaPredicted RBP15.08■□□□□ 0
A1CF-204ENST00000373997 PFKFB3Q16875 520 aaPredicted RBP15.08■□□□□ 0
A1CF-204ENST00000373997 CCDC17Q96LX7 622 aa15.08■□□□□ 0
A1CF-204ENST00000373997 FOXP1Q9H334 677 aaPredicted RBP15.08■□□□□ 0
A1CF-204ENST00000373997 MYOZ2Q9NPC6 264 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms