RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SMIM22K7EJ46 135 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 HIP1O00291 1037 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 RAD21O60216 631 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 TSPY3P0CV98 308 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 TSPY8P0CW00 308 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 DSG3P32926 999 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 CACNB2Q08289 660 aaPredicted RBP12.13□□□□□ -0.47
COL5A1-202ENST00000371820 CCL14Q16627 93 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 CLEC10AQ8IUN9 316 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 SIAH1Q8IUQ4 282 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 SPICE1Q8N0Z3 855 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 SHCBP1Q8NEM2 672 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 RILPL2Q969X0 211 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 GDF15Q99988 308 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 ATP6V1DQ9Y5K8 247 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 PLIN4Q96Q06 1357 aa12.13□□□□□ -0.47
COL5A1-202ENST00000371820 PFASO15067 1338 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 SLC15A5A6NIM6 579 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 ESPNB1AK53 854 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 SOX1O00570 391 aaPredicted RBP12.12□□□□□ -0.47
COL5A1-202ENST00000371820 STRNO43815 780 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 TTLL1O95922 423 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 PTPREP23469 700 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 CHMLP26374 656 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 CCND3P30281 292 aaPredicted RBP12.12□□□□□ -0.47
COL5A1-202ENST00000371820 MCM5P33992 734 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 COPB2P35606 906 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 NEK4P51957 841 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 MAP2K5Q13163 448 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 KIAA1211Q6ZU35 1233 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 SPATC1LQ9H0A9 340 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 MROH8Q9H579 483 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 SLC5A4Q9NY91 659 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 BTBD7Q9P203 1132 aa12.12□□□□□ -0.47
COL5A1-202ENST00000371820 ZMYND8Q9ULU4 1186 aaPredicted RBP12.12□□□□□ -0.47
COL5A1-202ENST00000371820 ZMYM6O95789 1325 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 ZNF236Q9UL36 1845 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 TSPY2A6NKD2 308 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 SLC25A27O95847 323 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 COL6A1P12109 1028 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 BMP8BP34820 402 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 NASPP49321 788 aaPredicted RBP12.11□□□□□ -0.47
COL5A1-202ENST00000371820 PLS1Q14651 629 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 ALX1Q15699 326 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 LHX8Q68G74 356 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 MCTP1Q6DN14 999 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 CCDC129Q6ZRS4 1044 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 NEDD1Q8NHV4 660 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.11□□□□□ -0.47
COL5A1-202ENST00000371820 DIAPH3Q9NSV4 1193 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 LMBRD1Q9NUN5 540 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 MTMR4Q9NYA4 1195 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 ANAPC4Q9UJX5 808 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.11□□□□□ -0.47
COL5A1-202ENST00000371820 CTDP1Q9Y5B0 961 aaPredicted RBP12.11□□□□□ -0.47
COL5A1-202ENST00000371820 CCDC171Q6TFL3 1326 aa12.11□□□□□ -0.47
COL5A1-202ENST00000371820 IGKV6D-41A0A0C4DH26 115 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 A0A0D9SFI3 127 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 F5H6K3 240 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 PRDM1O75626 825 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 HOXC6P09630 235 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 PCP11498 1178 aaKnown RBP12.1□□□□□ -0.47
COL5A1-202ENST00000371820 NT5C2P49902 561 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 TERF1P54274 439 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 TFAP4Q01664 338 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 KLRC3Q07444 240 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 GRB14Q14449 540 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 KIAA1755Q5JYT7 1200 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 MFSD14CQ5VZR4 134 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 SAMD1Q6SPF0 538 aaPredicted RBP12.1□□□□□ -0.47
COL5A1-202ENST00000371820 NCAPG2Q86XI2 1143 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 ABRAQ8N0Z2 381 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 MKL1Q969V6 931 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 ATG4CQ96DT6 458 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 CEP95Q96GE4 821 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 LRCH3Q96II8 777 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 ZSCAN31Q96LW9 406 aaPredicted RBP12.1□□□□□ -0.47
COL5A1-202ENST00000371820 FAM227BQ96M60 508 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 MOV10L1Q9BXT6 1211 aaKnown RBP12.1□□□□□ -0.47
COL5A1-202ENST00000371820 CLIP2Q9UDT6 1046 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 PPP1R9AQ9ULJ8 1098 aa12.1□□□□□ -0.47
COL5A1-202ENST00000371820 RLFQ13129 1914 aa12.09□□□□□ -0.47
COL5A1-202ENST00000371820 MYH4Q9Y623 1939 aa12.09□□□□□ -0.47
COL5A1-202ENST00000371820 PARP14Q460N5 1801 aa12.09□□□□□ -0.47
COL5A1-202ENST00000371820 CD2BP2O95400 341 aaKnown RBP12.09□□□□□ -0.47
COL5A1-202ENST00000371820 NDUFB10O96000 172 aa12.09□□□□□ -0.47
COL5A1-202ENST00000371820 FDX1P10109 184 aa12.09□□□□□ -0.47
COL5A1-202ENST00000371820 SYN1P17600 705 aa12.09□□□□□ -0.47
COL5A1-202ENST00000371820 ERCC3P19447 782 aa12.09□□□□□ -0.47
COL5A1-202ENST00000371820 NMIQ13287 307 aaPredicted RBP12.09□□□□□ -0.47
COL5A1-202ENST00000371820 FAM83BQ5T0W9 1011 aa12.09□□□□□ -0.47
COL5A1-202ENST00000371820 DPP9Q86TI2 863 aa12.09□□□□□ -0.47
COL5A1-202ENST00000371820 GMCL1P1Q8NEA9 526 aa12.09□□□□□ -0.47
COL5A1-202ENST00000371820 SLF1Q9BQI6 1058 aa12.09□□□□□ -0.47
COL5A1-202ENST00000371820 FLRT1Q9NZU1 646 aa12.09□□□□□ -0.47
COL5A1-202ENST00000371820 ADAMTS5Q9UNA0 930 aa12.09□□□□□ -0.47
COL5A1-202ENST00000371820 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL5A1-202ENST00000371820 ORC4O43929 436 aa12.08□□□□□ -0.48
COL5A1-202ENST00000371820 MSCO60682 206 aa12.08□□□□□ -0.48
COL5A1-202ENST00000371820 IGHA2P01877 340 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms