RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 C6orf203Q9P0P8 240 aaPredicted RBP8.5□□□□□ -1.05
BRCC3-203ENST00000369459 TTF2Q9UNY4 1162 aaKnown RBP8.5□□□□□ -1.05
BRCC3-203ENST00000369459 LZTS1Q9Y250 596 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 EP400Q96L91 3159 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 H0YIN7 160 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 PPEF1O14829 653 aaPredicted RBP8.5□□□□□ -1.05
BRCC3-203ENST00000369459 RPL17P18621 184 aaKnown RBP8.5□□□□□ -1.05
BRCC3-203ENST00000369459 HSPA4P34932 840 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 SH3BGRP55822 239 aaPredicted RBP8.5□□□□□ -1.05
BRCC3-203ENST00000369459 POU5F1BQ06416 359 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 ZGPATQ8N5A5 531 aaKnown RBP8.5□□□□□ -1.05
BRCC3-203ENST00000369459 PAF1Q8N7H5 531 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 HMG20BQ9P0W2 317 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 ZMYM6O95789 1325 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 CCDC171Q6TFL3 1326 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 LAMB1P07942 1786 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 FGFR1OPO95684 399 aaKnown RBP8.49□□□□□ -1.05
BRCC3-203ENST00000369459 RECKO95980 971 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 PHKA1P46020 1223 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 TBC1D8BQ0IIM8 1120 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 NMIQ13287 307 aaPredicted RBP8.49□□□□□ -1.05
BRCC3-203ENST00000369459 NEK10Q6ZWH5 1172 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 DEFB132Q7Z7B7 95 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 LILRB2Q8N423 598 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 CCDC89Q8N998 374 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 TMC2Q8TDI7 906 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 TBC1D5Q92609 795 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 APPBP2Q92624 585 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 DSCC1Q9BVC3 393 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 SENP2Q9HC62 589 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 AVENQ9NQS1 362 aaPredicted RBP8.49□□□□□ -1.05
BRCC3-203ENST00000369459 EXOC1Q9NV70 894 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 TIAM2Q8IVF5 1701 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 H0Y3Z8 333 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 TAF5LO75529 589 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 MYL1P05976 194 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 PYGLP06737 847 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 GPSM2P81274 684 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 AMPD3Q01432 767 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 PDE4BQ07343 736 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 TERF2Q15554 542 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 ZNF804AQ7Z570 1209 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 JAZF1Q86VZ6 243 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 STK11IPQ8N1F8 1099 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 DCLK2Q8N568 766 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 UPF1Q92900 1129 aaKnown RBP eCLIP8.49□□□□□ -1.05
BRCC3-203ENST00000369459 MAP4K1Q92918 833 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 FAM84BQ96KN1 310 aaPredicted RBP8.49□□□□□ -1.05
BRCC3-203ENST00000369459 GSDMAQ96QA5 445 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 CAPS2Q9BXY5 557 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 IRX2Q9BZI1 471 aaPredicted RBP8.49□□□□□ -1.05
BRCC3-203ENST00000369459 MTFR1LQ9H019 292 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 VPS33BQ9H267 617 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 DDX56Q9NY93 547 aaKnown RBP8.49□□□□□ -1.05
BRCC3-203ENST00000369459 GGA1Q9UJY5 639 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 FER1L6Q2WGJ9 1857 aa8.49□□□□□ -1.05
BRCC3-203ENST00000369459 SNED1Q8TER0 1413 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 HIBADHP31937 336 aaKnown RBP8.48□□□□□ -1.05
BRCC3-203ENST00000369459 ZAP70P43403 619 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 MRE11P49959 708 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 MAP3K12Q12852 859 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 TAF11Q15544 211 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 CCDC65Q8IXS2 484 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 CHPFQ8IZ52 775 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 FLCNQ8NFG4 579 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 TM6SF1Q9BZW5 370 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 OGFRQ9NZT2 677 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 CDK5RAP2Q96SN8 1893 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.48□□□□□ -1.05
BRCC3-203ENST00000369459 AP1G2O75843 785 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 CYP2E1P05181 493 aaPredicted RBP8.48□□□□□ -1.05
BRCC3-203ENST00000369459 HARSP12081 509 aaKnown RBP8.48□□□□□ -1.05
BRCC3-203ENST00000369459 IL1R1P14778 569 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 ADD2P35612 726 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 MCM2P49736 904 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 TGFB2P61812 414 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 RASGRF1Q13972 1273 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 SLMAPQ14BN4 828 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 KRT72Q14CN4 511 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 E2F4Q16254 413 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 RNF20Q5VTR2 975 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 CWC27Q6UX04 472 aaKnown RBP8.48□□□□□ -1.05
BRCC3-203ENST00000369459 UNC5DQ6UXZ4 953 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 SNX32Q86XE0 403 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 PARP9Q8IXQ6 854 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 IER2Q9BTL4 223 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 RTFDC1Q9BY42 306 aaPredicted RBP8.48□□□□□ -1.05
BRCC3-203ENST00000369459 ANO2Q9NQ90 1003 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 ATP8A1Q9Y2Q0 1164 aa8.48□□□□□ -1.05
BRCC3-203ENST00000369459 RRP15Q9Y3B9 282 aaKnown RBP8.48□□□□□ -1.05
BRCC3-203ENST00000369459 MYH2Q9UKX2 1941 aa8.47□□□□□ -1.05
BRCC3-203ENST00000369459 ECM29Q5VYK3 1845 aa8.47□□□□□ -1.05
BRCC3-203ENST00000369459 TRIM66O15016 1216 aa8.47□□□□□ -1.05
BRCC3-203ENST00000369459 NEBLO76041 1014 aa8.47□□□□□ -1.05
BRCC3-203ENST00000369459 SCARF1Q14162 830 aa8.47□□□□□ -1.05
BRCC3-203ENST00000369459 NOLC1Q14978 699 aaKnown RBP eCLIP8.47□□□□□ -1.05
BRCC3-203ENST00000369459 C2CD5Q86YS7 1000 aa8.47□□□□□ -1.05
BRCC3-203ENST00000369459 SUPT20HQ8NEM7 779 aa8.47□□□□□ -1.05
BRCC3-203ENST00000369459 WDR66Q8TBY9 1149 aa8.47□□□□□ -1.05
BRCC3-203ENST00000369459 RNPC3Q96LT9 517 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms