RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CYP7A1P22680 504 aa8.01□□□□□ -1.13
RNU4-39P-201ENST00000362455 RNF187Q5TA31 235 aaPredicted RBP8.01□□□□□ -1.13
RNU4-39P-201ENST00000362455 FOXB2Q5VYV0 432 aa8.01□□□□□ -1.13
RNU4-39P-201ENST00000362455 BVESQ8NE79 360 aa8.01□□□□□ -1.13
RNU4-39P-201ENST00000362455 ADCY4Q8NFM4 1077 aa8.01□□□□□ -1.13
RNU4-39P-201ENST00000362455 GIMAP7Q8NHV1 300 aa8.01□□□□□ -1.13
RNU4-39P-201ENST00000362455 FEZ1Q99689 392 aa8.01□□□□□ -1.13
RNU4-39P-201ENST00000362455 FAM83CQ9BQN1 747 aa8.01□□□□□ -1.13
RNU4-39P-201ENST00000362455 ABCC2Q92887 1545 aa8.01□□□□□ -1.13
RNU4-39P-201ENST00000362455 KDM6BO15054 1643 aa8□□□□□ -1.13
RNU4-39P-201ENST00000362455 PPM1GO15355 546 aaPredicted RBP8□□□□□ -1.13
RNU4-39P-201ENST00000362455 GYS2P54840 703 aa8□□□□□ -1.13
RNU4-39P-201ENST00000362455 ZNF445P59923 1031 aa8□□□□□ -1.13
RNU4-39P-201ENST00000362455 PPP2R2AP63151 447 aa8□□□□□ -1.13
RNU4-39P-201ENST00000362455 SNW1Q13573 536 aaKnown RBP8□□□□□ -1.13
RNU4-39P-201ENST00000362455 HSP90AA2PQ14568 343 aaPredicted RBP8□□□□□ -1.13
RNU4-39P-201ENST00000362455 TCEA2Q15560 299 aa8□□□□□ -1.13
RNU4-39P-201ENST00000362455 ZC3H12BQ5HYM0 836 aaKnown RBP8□□□□□ -1.13
RNU4-39P-201ENST00000362455 GATA6Q92908 595 aa8□□□□□ -1.13
RNU4-39P-201ENST00000362455 AARSD1Q9BTE6 412 aaKnown RBP8□□□□□ -1.13
RNU4-39P-201ENST00000362455 PRDM14Q9GZV8 571 aa8□□□□□ -1.13
RNU4-39P-201ENST00000362455 PRDM5Q9NQX1 630 aaPredicted RBP8□□□□□ -1.13
RNU4-39P-201ENST00000362455 TRAV20A0A0B4J274 112 aa7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 PPP1R12AO14974 1030 aaPredicted RBP7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 TBX1O43435 398 aa7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 L1CAMP32004 1257 aa7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 ADMP35318 185 aa7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 GATA4P43694 442 aa7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 NOL9Q5SY16 702 aaKnown RBP7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 YOD1Q5VVQ6 348 aaPredicted RBP7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 FAM214BQ7L5A3 538 aa7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 SYNPOQ8N3V7 929 aa7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 BRF1Q92994 677 aa7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 RCC1LQ96I51 464 aaKnown RBP7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 EXOC2Q96KP1 924 aa7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 C7orf69Q9H7B7 122 aa7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 AKT3Q9Y243 479 aa7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 CD2APQ9Y5K6 639 aa7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 PLB1Q6P1J6 1458 aa7.99□□□□□ -1.13
RNU4-39P-201ENST00000362455 DISP1Q96F81 1524 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 UACAQ9BZF9 1416 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 HMX2A2RU54 273 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 NOP56O00567 594 aaKnown RBP7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 CBX7O95931 251 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 PLA2G4EQ3MJ16 856 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 FAM209AQ5JX71 171 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 SFRP5Q5T4F7 317 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 FILIP1Q7Z7B0 1213 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 ZAR1Q86SH2 424 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 ARHGEF39Q8N4T4 335 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 GPATCH3Q96I76 525 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 COX4I2Q96KJ9 171 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 MRGPRX3Q96LB0 322 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 Q96M66 194 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 TBC1D32Q96NH3 1257 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 CDC6Q99741 560 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 GFOD1Q9NXC2 390 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 CGGBP1Q9UFW8 167 aaPredicted RBP7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 EMC9Q9Y3B6 208 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 FHOD1Q9Y613 1164 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 UHRF1BP1LA0JNW5 1464 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 ADGRL1O94910 1474 aa7.98□□□□□ -1.13
RNU4-39P-201ENST00000362455 A0A087WZG4 1122 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 CCDC163A0A0D9SF12 145 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 CAPNS1P04632 268 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 GRIA2P42262 883 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 TAF7LQ5H9L4 462 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 GPAT2Q6NUI2 795 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 OGFOD3Q6PK18 319 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 TMC3Q7Z5M5 1100 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 TRIM59Q8IWR1 403 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 FIBCD1Q8N539 461 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 DTWD2Q8NBA8 298 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 SYTL5Q8TDW5 730 aaPredicted RBP7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 KISS1RQ969F8 398 aaPredicted RBP7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 TP53INP1Q96A56 240 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 HEXIM2Q96MH2 286 aaKnown RBP7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 DHRS4Q9BTZ2 278 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 NOL6Q9H6R4 1146 aaKnown RBP7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 IFT57Q9NWB7 429 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 STOML1Q9UBI4 398 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 RAXQ9Y2V3 346 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 PRKAB1Q9Y478 270 aa7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 EPRSP07814 1512 aaKnown RBP7.97□□□□□ -1.13
RNU4-39P-201ENST00000362455 CARMIL2Q6F5E8 1435 aa7.96□□□□□ -1.13
RNU4-39P-201ENST00000362455 TRBV23-1A0A0A0MS06 115 aa7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 DNAJC6O75061 913 aa7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 KIR3DL1P43629 444 aa7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 PPP2R5DQ14738 602 aa7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 PTPROQ16827 1216 aa7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 C21orf62-AS1Q17RA5 79 aa7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 POMZP3Q6PJE2 187 aa7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 ANKRD13AQ8IZ07 590 aa7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 SHISA5Q8N114 240 aa7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 CRACR2BQ8N4Y2 399 aaPredicted RBP7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 BTN2A2Q8WVV5 523 aa7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 IPO9Q96P70 1041 aaKnown RBP7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 SPC25Q9HBM1 224 aa7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 PRR13Q9NZ81 148 aa7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 GTF2IRD1Q9UHL9 959 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms