RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 FLOT1O75955 427 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 CORO7P57737 925 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 PUM3Q15397 648 aaKnown RBP17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 CCDC38Q502W7 563 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 RAB17Q9H0T7 212 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 SUGCTQ9HAC7 445 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 PRM3Q9NNZ6 103 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 GPR108Q9NPR9 543 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 RWDD2AQ9UIY3 292 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 ABCA6Q8N139 1617 aa17.67■□□□□ 0.42
CLSTN1-201ENST00000361311 SEMA3EO15041 775 aa17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 MXRA7P84157 204 aa17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 SEL1L2Q5TEA6 688 aa17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 SHC4Q6S5L8 630 aa17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 REXO1L1PQ8IX06 675 aa17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 ZNF622Q969S3 477 aaKnown RBP eCLIP17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 SIRT1Q96EB6 747 aa17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 RRP36Q96EU6 259 aaKnown RBP17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 CNOT6LQ96LI5 555 aaKnown RBP17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 CCNT1O60563 726 aaKnown RBP17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 N4BP1O75113 896 aaKnown RBP17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 LDHCP07864 332 aa17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 IFNAR1P17181 557 aa17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 PAGE5Q96GU1 130 aa17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 CXorf56Q9H5V9 222 aa17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 NHEJ1Q9H9Q4 299 aaPredicted RBP17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 HDAC6Q9UBN7 1215 aa17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 ZBED6P86452 979 aa17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 ZSCAN29Q8IWY8 852 aaPredicted RBP17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 MGARPQ8TDB4 240 aa17.66■□□□□ 0.42
CLSTN1-201ENST00000361311 FBXW10Q5XX13 1052 aa17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 TAF6LQ9Y6J9 622 aa17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 IKBKGQ9Y6K9 419 aa17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 ARHGEF40Q8TER5 1519 aa17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 SH2B2O14492 632 aaPredicted RBP17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 FOXN1O15353 648 aa17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 MOCS3O95396 460 aa17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 TRIM68Q6AZZ1 485 aa17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 STMN2Q93045 179 aa17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 USP42Q9H9J4 1324 aaKnown RBP17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 ADORA1P30542 326 aa17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 ZNF658Q5TYW1 1059 aaPredicted RBP17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 TC2NQ8N9U0 490 aa17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 PUS3Q9BZE2 481 aaKnown RBP17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 ATP6V0A2Q9Y487 856 aa17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 TNKSO95271 1327 aa17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 LRRN4CLQ8ND94 238 aa17.65■□□□□ 0.42
CLSTN1-201ENST00000361311 TCP11X2Q5H9J9 407 aa17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 STOX1Q6ZVD7 989 aa17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 RIN2Q8WYP3 895 aaPredicted RBP17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 ANKIB1Q9P2G1 1089 aa17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 NFU1Q9UMS0 254 aa17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 SPHKAPQ2M3C7 1700 aa17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 CCDC160A6NGH7 325 aa17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 CASP1P29466 404 aa17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 SYCE1Q8N0S2 351 aa17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 SPATA5Q8NB90 893 aa17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 HNRNPLLQ8WVV9 542 aaKnown RBP17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 VCXQ9H320 206 aa17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 VIPAS39Q9H9C1 493 aa17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 HOMER3Q9NSC5 361 aa17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 RPL13P26373 211 aaKnown RBP17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 ACTN3Q08043 901 aaPredicted RBP17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 METTL16Q86W50 562 aaKnown RBP17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 PUS7LQ9H0K6 701 aaKnown RBP17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 PPP1R1BQ9UD71 204 aaPredicted RBP17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 ABCC3O15438 1527 aa17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 KAT6BQ8WYB5 2073 aa17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 RNF10Q8N5U6 811 aaKnown RBP17.64■□□□□ 0.41
CLSTN1-201ENST00000361311 PRR29P0C7W0 189 aa17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 ARMC9Q7Z3E5 817 aa17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 LPIN2Q92539 896 aa17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 LSM14BQ9BX40 385 aaKnown RBP17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 RNF14Q9UBS8 474 aa17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 PRR36Q9H6K5 1346 aa17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 HMGB1P1B2RPK0 211 aaPredicted RBP17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 CTNND1O60716 968 aaKnown RBP17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 PPARAQ07869 468 aa17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 GSTA5Q7RTV2 222 aa17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 ANKRD42Q8N9B4 389 aa17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 QRICH2Q9H0J4 1663 aa17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 KIF28PB7ZC32 967 aa17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 IQCGQ9H095 443 aaKnown RBP17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 ZNF446Q9NWS9 450 aa17.63■□□□□ 0.41
CLSTN1-201ENST00000361311 ANO9A1A5B4 782 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 KCNA6P17658 529 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 TNFAIP3P21580 790 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 NONOQ15233 471 aaKnown RBP eCLIP17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 RBBP5Q15291 538 aaKnown RBP17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 HS2ST1Q7LGA3 356 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 NELFCDQ8IXH7 590 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 SMC6Q96SB8 1091 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 ATP2A1O14983 1001 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 LONP1P36776 959 aaKnown RBP17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 IFNAR2P48551 515 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 HERC4Q5GLZ8 1057 aaPredicted RBP17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 WHAMMQ8TF30 809 aa17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 RNF26Q9BY78 433 aaPredicted RBP17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.62■□□□□ 0.41
CLSTN1-201ENST00000361311 TUBE1Q9UJT0 475 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms