RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 NUB1Q9Y5A7 615 aa22.41■■□□□ 1.18
CDC42BPB-201ENST00000361246 BZW2Q9Y6E2 419 aaKnown RBP22.41■■□□□ 1.18
CDC42BPB-201ENST00000361246 GADD45BO75293 160 aaPredicted RBP22.41■■□□□ 1.18
CDC42BPB-201ENST00000361246 SKIV2LQ15477 1246 aaKnown RBP22.41■■□□□ 1.18
CDC42BPB-201ENST00000361246 SPATA24Q86W54 205 aa22.41■■□□□ 1.18
CDC42BPB-201ENST00000361246 MEIS1O00470 390 aa22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 STAM2O75886 525 aa22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 MGARPQ8TDB4 240 aa22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 FTOQ9C0B1 505 aaKnown RBP eCLIP22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 SLC39A2Q9NP94 309 aa22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 TNKSO95271 1327 aa22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 ADD1P35611 737 aaKnown RBP22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 SND1Q7KZF4 910 aaKnown RBP eCLIP22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 MMP10P09238 476 aa22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 VWA3BQ502W6 1294 aa22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 CYP26C1Q6V0L0 522 aa22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 PI4K2BQ8TCG2 481 aa22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 SATB1Q01826 763 aa22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 PCDHA1Q9Y5I3 950 aa22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 CCDC105Q8IYK2 499 aa22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 ATP8A2Q9NTI2 1148 aa22.4■■□□□ 1.18
CDC42BPB-201ENST00000361246 TMEM191BP0C7N4 346 aa22.39■■□□□ 1.18
CDC42BPB-201ENST00000361246 M0R2C6 588 aa22.39■■□□□ 1.18
CDC42BPB-201ENST00000361246 ATF7P17544 494 aaPredicted RBP22.39■■□□□ 1.18
CDC42BPB-201ENST00000361246 VAV2P52735 878 aa22.39■■□□□ 1.18
CDC42BPB-201ENST00000361246 FANCCQ00597 558 aa22.39■■□□□ 1.18
CDC42BPB-201ENST00000361246 FAM160B1Q5W0V3 765 aa22.39■■□□□ 1.18
CDC42BPB-201ENST00000361246 ARMCX5Q6P1M9 558 aa22.39■■□□□ 1.17
CDC42BPB-201ENST00000361246 RSAD2Q8WXG1 361 aa22.39■■□□□ 1.17
CDC42BPB-201ENST00000361246 ZNF577Q9BSK1 485 aa22.39■■□□□ 1.17
CDC42BPB-201ENST00000361246 INO80B-WBP1J3KQ70 363 aa22.39■■□□□ 1.17
CDC42BPB-201ENST00000361246 MTX1Q13505 466 aa22.39■■□□□ 1.17
CDC42BPB-201ENST00000361246 SFMBT2Q5VUG0 894 aa22.39■■□□□ 1.17
CDC42BPB-201ENST00000361246 DYNLL2Q96FJ2 89 aa22.39■■□□□ 1.17
CDC42BPB-201ENST00000361246 INO80BQ9C086 356 aaPredicted RBP22.39■■□□□ 1.17
CDC42BPB-201ENST00000361246 TLR7Q9NYK1 1049 aaKnown RBP22.39■■□□□ 1.17
CDC42BPB-201ENST00000361246 TLR3O15455 904 aaKnown RBP22.39■■□□□ 1.17
CDC42BPB-201ENST00000361246 SMIM5Q71RC9 77 aa22.39■■□□□ 1.17
CDC42BPB-201ENST00000361246 EN1Q05925 392 aaPredicted RBP22.38■■□□□ 1.17
CDC42BPB-201ENST00000361246 SUPT20HL1Q3ZLR7 823 aa22.38■■□□□ 1.17
CDC42BPB-201ENST00000361246 SLC9C1Q4G0N8 1177 aa22.38■■□□□ 1.17
CDC42BPB-201ENST00000361246 CLIC6Q96NY7 704 aa22.38■■□□□ 1.17
CDC42BPB-201ENST00000361246 HINFPQ9BQA5 517 aa22.38■■□□□ 1.17
CDC42BPB-201ENST00000361246 PPP2R5AQ15172 486 aa22.38■■□□□ 1.17
CDC42BPB-201ENST00000361246 PRDM5Q9NQX1 630 aaPredicted RBP22.38■■□□□ 1.17
CDC42BPB-201ENST00000361246 YEATS2Q9ULM3 1422 aa22.38■■□□□ 1.17
CDC42BPB-201ENST00000361246 CYP2D7A0A087X1C5 515 aa22.38■■□□□ 1.17
CDC42BPB-201ENST00000361246 SLF1Q9BQI6 1058 aa22.38■■□□□ 1.17
CDC42BPB-201ENST00000361246 PCIF1Q9H4Z3 704 aa22.38■■□□□ 1.17
CDC42BPB-201ENST00000361246 SGSM2O43147 1006 aa22.37■■□□□ 1.17
CDC42BPB-201ENST00000361246 PPP2R3AQ06190 1150 aa22.37■■□□□ 1.17
CDC42BPB-201ENST00000361246 IFNB1P01574 187 aa22.37■■□□□ 1.17
CDC42BPB-201ENST00000361246 FAM178BQ8IXR5 827 aa22.37■■□□□ 1.17
CDC42BPB-201ENST00000361246 BUB1O43683 1085 aa22.37■■□□□ 1.17
CDC42BPB-201ENST00000361246 PPM1KQ8N3J5 372 aa22.37■■□□□ 1.17
CDC42BPB-201ENST00000361246 AOC3Q16853 763 aa22.37■■□□□ 1.17
CDC42BPB-201ENST00000361246 STK24Q9Y6E0 443 aa22.37■■□□□ 1.17
CDC42BPB-201ENST00000361246 CCDC93Q567U6 631 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 COA7Q96BR5 231 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 PLEKHG3A1L390 1219 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 CCNA1P78396 465 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 SUDS3Q9H7L9 328 aaPredicted RBP22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 VPS37BQ9H9H4 285 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 ARAP3Q8WWN8 1544 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 ZSCAN20P17040 1043 aaPredicted RBP22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 SLC12A2P55011 1212 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 ME3Q16798 604 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 GANCQ8TET4 914 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 KDM5AP29375 1690 aaKnown RBP22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 USP17L8P0C7I0 530 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 LRCH2Q5VUJ6 765 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 UNC5CLQ8IV45 518 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 NKIRAS1Q9NYS0 192 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 PRKAB2O43741 272 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 SNX21Q969T3 373 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 NRBP2Q9NSY0 501 aa22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 ADKP55263 362 aaKnown RBP22.36■■□□□ 1.17
CDC42BPB-201ENST00000361246 FGAP02671 866 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 HOXA13P31271 388 aaPredicted RBP22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 C8orf74Q6P047 294 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 C17orf53Q8N3J3 647 aaPredicted RBP22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 CHMP6Q96FZ7 201 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 TTC14Q96N46 770 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 ALDH3A1P30838 453 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 ARHGEF6Q15052 776 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 CCDC121Q6ZUS5 278 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 AFF2P51816 1311 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 PI16Q6UXB8 463 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 C7orf31Q8N865 590 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 MTERF2Q49AM1 385 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 TTBK2Q6IQ55 1244 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 GJA10Q969M2 543 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 RNF181Q9P0P0 153 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 SRGAP2CP0DJJ0 459 aa22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 SECISBP2LQ93073 1101 aaKnown RBP22.35■■□□□ 1.17
CDC42BPB-201ENST00000361246 ZNF827Q17R98 1081 aa22.34■■□□□ 1.17
CDC42BPB-201ENST00000361246 KIAA1024Q9UPX6 916 aa22.34■■□□□ 1.17
CDC42BPB-201ENST00000361246 MAPKBP1O60336 1514 aa22.34■■□□□ 1.17
CDC42BPB-201ENST00000361246 KDM3AQ9Y4C1 1321 aa22.34■■□□□ 1.17
CDC42BPB-201ENST00000361246 NLRP12P59046 1061 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms