RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 TBC1D8O95759 1140 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 PSMC4P43686 418 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 CCDC93Q567U6 631 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 C1orf141Q5JVX7 400 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 ACRBPQ8NEB7 543 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 EVI5LQ96CN4 794 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 DYNLL2Q96FJ2 89 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 BLZF1Q9H2G9 400 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 AGPAT5Q9NUQ2 364 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 MED13LQ71F56 2210 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 AKAP6Q13023 2319 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 CDC25CP30307 473 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 RTKN2Q8IZC4 609 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 TRPM4Q8TD43 1214 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 NAP1L2Q9ULW6 460 aaPredicted RBP6.57□□□□□ -1.36
CD47-201ENST00000355354 PRR14LQ5THK1 2151 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 GOLGA8HP0CJ92 632 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 BECN1Q14457 450 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 LLGL2Q6P1M3 1020 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 TC2NQ8N9U0 490 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 CPLX3Q8WVH0 158 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 FAM53CQ9NYF3 392 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 HMG20BQ9P0W2 317 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 H0YIN7 160 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 CLCN6P51797 869 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 CACNB3P54284 484 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 FAM47AQ5JRC9 791 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 LINS1Q8NG48 757 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 KAT2BQ92831 832 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 SMARCE1Q969G3 411 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 CCDC34Q96HJ3 373 aa6.57□□□□□ -1.36
CD47-201ENST00000355354 LBHD1Q9BQE6 289 aaPredicted RBP6.57□□□□□ -1.36
CD47-201ENST00000355354 COL4A4P53420 1690 aaPredicted RBP6.56□□□□□ -1.36
CD47-201ENST00000355354 TMEM88BA6NKF7 163 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 ZNF75DP51815 510 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 FSD1Q9BTV5 496 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 NUMBLQ9Y6R0 609 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 ZNF292O60281 2723 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 MYH11P35749 1972 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 FLNCQ14315 2725 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 GSG1L2A8MUP6 293 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 IPO8O15397 1037 aaKnown RBP6.56□□□□□ -1.36
CD47-201ENST00000355354 ZRANB2O95218 330 aaKnown RBP eCLIP6.56□□□□□ -1.36
CD47-201ENST00000355354 STARD3NLO95772 234 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 CXCR5P32302 372 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 ERVK-24P63145 666 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 CXCL9Q07325 125 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 WDR59Q6PJI9 974 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 CYP2W1Q8TAV3 490 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 DOCK9Q9BZ29 2069 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 SLC10A3P09131 477 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 EPS15P42566 896 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 CC2D2BQ6DHV5 1058 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 CNBD1Q8NA66 436 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.56□□□□□ -1.36
CD47-201ENST00000355354 VPS54Q9P1Q0 977 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 PLCE1Q9P212 2302 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 EPHX2P34913 555 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 PLCD1P51178 756 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 VPS37DQ86XT2 251 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.56□□□□□ -1.36
CD47-201ENST00000355354 ARMT1Q9H993 441 aa6.56□□□□□ -1.36
CD47-201ENST00000355354 MYBL1P10243 752 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 PALB2Q86YC2 1186 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 IL17RBQ9NRM6 502 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 FAN1Q9Y2M0 1017 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 ASTN2O75129 1339 aaPredicted RBP6.55□□□□□ -1.36
CD47-201ENST00000355354 XDHP47989 1333 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 MCM3APO60318 1980 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 MAP2K2P36507 400 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 SNAP25P60880 206 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 MTM1Q13496 603 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 SF3A1Q15459 793 aaKnown RBP6.55□□□□□ -1.36
CD47-201ENST00000355354 LDLRAD1Q5T700 205 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 MB21D2Q8IYB1 491 aaPredicted RBP6.55□□□□□ -1.36
CD47-201ENST00000355354 TMEM87AQ8NBN3 555 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 KIF1BPQ96EK5 621 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 ZNF277Q9NRM2 450 aaPredicted RBP6.55□□□□□ -1.36
CD47-201ENST00000355354 MYO9AB2RTY4 2548 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 LRRIQ3A6PVS8 624 aaPredicted RBP6.55□□□□□ -1.36
CD47-201ENST00000355354 H7C1W4 665 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 GPAA1O43292 621 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 TM4SF4P48230 202 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 IRX5P78411 483 aaPredicted RBP6.55□□□□□ -1.36
CD47-201ENST00000355354 ALDH1L1O75891 902 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 PFKFB1P16118 471 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 PPP2R3AQ06190 1150 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 NCAPH2Q6IBW4 605 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 XAGE2Q96GT9 111 aa6.55□□□□□ -1.36
CD47-201ENST00000355354 PURBQ96QR8 312 aaKnown RBP6.55□□□□□ -1.36
CD47-201ENST00000355354 ESYT3A0FGR9 886 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 CCDC69A6NI79 296 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 POLR3GO15318 223 aaPredicted RBP6.54□□□□□ -1.36
CD47-201ENST00000355354 COPB2P35606 906 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 FKBP1AP62942 108 aaKnown RBP6.54□□□□□ -1.36
CD47-201ENST00000355354 GRAPQ13588 217 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 FBXO18Q8NFZ0 1043 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 GRAPLQ8TC17 118 aaPredicted RBP6.54□□□□□ -1.36
CD47-201ENST00000355354 DHX58Q96C10 678 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 TEPSINQ96N21 525 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms