RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 ANKRD13CQ8N6S4 541 aa19.95■□□□□ 0.78
APP-202ENST00000348990 RNF26Q9BY78 433 aaPredicted RBP19.95■□□□□ 0.78
APP-202ENST00000348990 C5P01031 1676 aa19.95■□□□□ 0.78
APP-202ENST00000348990 PDE2AO00408 941 aaPredicted RBP19.94■□□□□ 0.78
APP-202ENST00000348990 HLFQ16534 295 aa19.94■□□□□ 0.78
APP-202ENST00000348990 ZNF658Q5TYW1 1059 aaPredicted RBP19.94■□□□□ 0.78
APP-202ENST00000348990 MMS22LQ6ZRQ5 1243 aa19.94■□□□□ 0.78
APP-202ENST00000348990 KRT26Q7Z3Y9 468 aa19.94■□□□□ 0.78
APP-202ENST00000348990 SH3RF1Q7Z6J0 888 aa19.94■□□□□ 0.78
APP-202ENST00000348990 SECISBP2LQ93073 1101 aaKnown RBP19.94■□□□□ 0.78
APP-202ENST00000348990 RRP36Q96EU6 259 aaKnown RBP19.94■□□□□ 0.78
APP-202ENST00000348990 MAP3K15Q6ZN16 1313 aa19.94■□□□□ 0.78
APP-202ENST00000348990 KLK7P49862 253 aa19.94■□□□□ 0.78
APP-202ENST00000348990 H7C1D1 291 aa19.94■□□□□ 0.78
APP-202ENST00000348990 AARSP49588 968 aaKnown RBP eCLIP19.94■□□□□ 0.78
APP-202ENST00000348990 BCAMP50895 628 aa19.94■□□□□ 0.78
APP-202ENST00000348990 CTSWP56202 376 aa19.94■□□□□ 0.78
APP-202ENST00000348990 HDAC7Q8WUI4 952 aa19.94■□□□□ 0.78
APP-202ENST00000348990 NHEJ1Q9H9Q4 299 aaPredicted RBP19.94■□□□□ 0.78
APP-202ENST00000348990 PSMA7O14818 248 aa19.93■□□□□ 0.78
APP-202ENST00000348990 SETQ01105 290 aaPredicted RBP19.93■□□□□ 0.78
APP-202ENST00000348990 PUM3Q15397 648 aaKnown RBP19.93■□□□□ 0.78
APP-202ENST00000348990 RNF187Q5TA31 235 aaPredicted RBP19.93■□□□□ 0.78
APP-202ENST00000348990 CSGALNACT2Q8N6G5 542 aa19.93■□□□□ 0.78
APP-202ENST00000348990 MYH8P13535 1937 aa19.93■□□□□ 0.78
APP-202ENST00000348990 TCRBV5S4A2TA0A5A2 114 aa19.93■□□□□ 0.78
APP-202ENST00000348990 HSF2BPO75031 334 aa19.93■□□□□ 0.78
APP-202ENST00000348990 ZPR1O75312 459 aa19.93■□□□□ 0.78
APP-202ENST00000348990 ALX1Q15699 326 aa19.93■□□□□ 0.78
APP-202ENST00000348990 IQCA1Q86XH1 822 aa19.93■□□□□ 0.78
APP-202ENST00000348990 LPIN2Q92539 896 aa19.93■□□□□ 0.78
APP-202ENST00000348990 LRRC1Q9BTT6 524 aa19.93■□□□□ 0.78
APP-202ENST00000348990 LRWD1Q9UFC0 647 aa19.93■□□□□ 0.78
APP-202ENST00000348990 RCCD1A6NED2 376 aa19.92■□□□□ 0.78
APP-202ENST00000348990 PDCLQ13371 301 aa19.92■□□□□ 0.78
APP-202ENST00000348990 IFT81Q8WYA0 676 aa19.92■□□□□ 0.78
APP-202ENST00000348990 RPGRIP1Q96KN7 1286 aa19.92■□□□□ 0.78
APP-202ENST00000348990 USO1O60763 962 aaKnown RBP19.92■□□□□ 0.78
APP-202ENST00000348990 UBA7P41226 1012 aa19.92■□□□□ 0.78
APP-202ENST00000348990 PPFIA1Q13136 1202 aa19.92■□□□□ 0.78
APP-202ENST00000348990 TYW1BQ6NUM6 668 aa19.92■□□□□ 0.78
APP-202ENST00000348990 DMGDHQ9UI17 866 aaKnown RBP19.92■□□□□ 0.78
APP-202ENST00000348990 CAPN7Q9Y6W3 813 aa19.92■□□□□ 0.78
APP-202ENST00000348990 NWD2Q9ULI1 1742 aa19.92■□□□□ 0.78
APP-202ENST00000348990 SOS2Q07890 1332 aaPredicted RBP19.92■□□□□ 0.78
APP-202ENST00000348990 AKR1B10O60218 316 aa19.92■□□□□ 0.78
APP-202ENST00000348990 TACC1O75410 805 aa19.92■□□□□ 0.78
APP-202ENST00000348990 CSF1RP07333 972 aa19.92■□□□□ 0.78
APP-202ENST00000348990 CCDC178Q5BJE1 867 aa19.92■□□□□ 0.78
APP-202ENST00000348990 STAG1Q8WVM7 1258 aa19.92■□□□□ 0.78
APP-202ENST00000348990 FAM184BQ9ULE4 1060 aa19.92■□□□□ 0.78
APP-202ENST00000348990 ARHGAP23Q9P227 1491 aa19.91■□□□□ 0.78
APP-202ENST00000348990 OPA1O60313 960 aa19.91■□□□□ 0.78
APP-202ENST00000348990 PMS1P54277 932 aaKnown RBP19.91■□□□□ 0.78
APP-202ENST00000348990 OTUD6BQ8N6M0 293 aa19.91■□□□□ 0.78
APP-202ENST00000348990 EHD2Q9NZN4 543 aa19.91■□□□□ 0.78
APP-202ENST00000348990 LRRC10BA6NIK2 292 aa19.91■□□□□ 0.78
APP-202ENST00000348990 PP2D1A8MPX8 630 aa19.91■□□□□ 0.78
APP-202ENST00000348990 RASGRP4Q8TDF6 673 aa19.91■□□□□ 0.78
APP-202ENST00000348990 TUBGCP2Q9BSJ2 902 aa19.91■□□□□ 0.78
APP-202ENST00000348990 PHF20Q9BVI0 1012 aa19.91■□□□□ 0.78
APP-202ENST00000348990 TMOD3Q9NYL9 352 aa19.91■□□□□ 0.78
APP-202ENST00000348990 LGALS16A8MUM7 142 aa19.91■□□□□ 0.78
APP-202ENST00000348990 PAFAH1B1P43034 410 aa19.91■□□□□ 0.78
APP-202ENST00000348990 RNASE9P60153 205 aaKnown RBP19.91■□□□□ 0.78
APP-202ENST00000348990 SH2D3CQ8N5H7 860 aa19.91■□□□□ 0.78
APP-202ENST00000348990 PRDM11Q9NQV5 511 aa19.91■□□□□ 0.78
APP-202ENST00000348990 PKN1Q16512 942 aa19.9■□□□□ 0.78
APP-202ENST00000348990 SHISA4Q96DD7 197 aa19.9■□□□□ 0.78
APP-202ENST00000348990 MYCBPQ99417 103 aaPredicted RBP19.9■□□□□ 0.78
APP-202ENST00000348990 MTRQ99707 1265 aa19.9■□□□□ 0.78
APP-202ENST00000348990 MLXIPQ9HAP2 919 aa19.9■□□□□ 0.78
APP-202ENST00000348990 AGPSO00116 658 aa19.9■□□□□ 0.78
APP-202ENST00000348990 MOCS3O95396 460 aa19.9■□□□□ 0.78
APP-202ENST00000348990 ATF3P18847 181 aa19.9■□□□□ 0.78
APP-202ENST00000348990 PAPD7Q5XG87 772 aaKnown RBP19.9■□□□□ 0.78
APP-202ENST00000348990 MCTP2Q6DN12 878 aa19.9■□□□□ 0.78
APP-202ENST00000348990 WDR59Q6PJI9 974 aa19.9■□□□□ 0.78
APP-202ENST00000348990 ENAHQ8N8S7 591 aaPredicted RBP19.9■□□□□ 0.78
APP-202ENST00000348990 NOC4LQ9BVI4 516 aaKnown RBP19.9■□□□□ 0.78
APP-202ENST00000348990 RTL9Q8NET4 1388 aa19.9■□□□□ 0.78
APP-202ENST00000348990 TARSL2A2RTX5 802 aaKnown RBP19.89■□□□□ 0.78
APP-202ENST00000348990 GNAT2P19087 354 aa19.89■□□□□ 0.78
APP-202ENST00000348990 ZSCAN10Q96SZ4 725 aaPredicted RBP19.89■□□□□ 0.78
APP-202ENST00000348990 IFIH1Q9BYX4 1025 aaKnown RBP19.89■□□□□ 0.78
APP-202ENST00000348990 FAM207AQ9NSI2 230 aaPredicted RBP19.89■□□□□ 0.78
APP-202ENST00000348990 ABCC12Q96J65 1359 aa19.89■□□□□ 0.77
APP-202ENST00000348990 DNM2P50570 870 aa19.89■□□□□ 0.77
APP-202ENST00000348990 C2CD5Q86YS7 1000 aa19.89■□□□□ 0.77
APP-202ENST00000348990 MMRN2Q9H8L6 949 aa19.89■□□□□ 0.77
APP-202ENST00000348990 EXOC1Q9NV70 894 aa19.89■□□□□ 0.77
APP-202ENST00000348990 NUTM2BA6NNL0 878 aaPredicted RBP19.89■□□□□ 0.77
APP-202ENST00000348990 NUTM2EB1AL46 878 aaPredicted RBP19.89■□□□□ 0.77
APP-202ENST00000348990 STARD3NLO95772 234 aa19.89■□□□□ 0.77
APP-202ENST00000348990 ATP2C1P98194 919 aaPredicted RBP19.89■□□□□ 0.77
APP-202ENST00000348990 ENOX2Q16206 610 aaKnown RBP19.89■□□□□ 0.77
APP-202ENST00000348990 NLRP10Q86W26 655 aa19.89■□□□□ 0.77
APP-202ENST00000348990 CAPN11Q9UMQ6 739 aa19.89■□□□□ 0.77
APP-202ENST00000348990 USP8P40818 1118 aa19.88■□□□□ 0.77
APP-202ENST00000348990 NFRKBQ6P4R8 1299 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms