RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 LOC102724428A0A0B4J2F2 783 aa16.4■□□□□ 0.22
SMTN-202ENST00000347557 SIK1P57059 783 aa16.4■□□□□ 0.22
SMTN-202ENST00000347557 ITPK1Q13572 414 aa16.4■□□□□ 0.22
SMTN-202ENST00000347557 PPP2R5BQ15173 497 aa16.4■□□□□ 0.22
SMTN-202ENST00000347557 PDXDC2PQ6P474 469 aa16.4■□□□□ 0.22
SMTN-202ENST00000347557 CAGE1Q8TC20 777 aa16.4■□□□□ 0.22
SMTN-202ENST00000347557 ZNF384Q8TF68 577 aa16.4■□□□□ 0.22
SMTN-202ENST00000347557 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
SMTN-202ENST00000347557 DYNLL2Q96FJ2 89 aa16.4■□□□□ 0.22
SMTN-202ENST00000347557 FAM84BQ96KN1 310 aaPredicted RBP16.4■□□□□ 0.22
SMTN-202ENST00000347557 GOLGA8HP0CJ92 632 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 TFAP4Q01664 338 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 E2F4Q16254 413 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 BEND6Q5SZJ8 279 aaPredicted RBP16.39■□□□□ 0.21
SMTN-202ENST00000347557 ZNF622Q969S3 477 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■■■□□ 16
SMTN-202ENST00000347557 DRC1Q96MC2 740 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 STX8Q9UNK0 236 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 FAM205AQ6ZU69 1335 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 B4DLN1 442 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 SPAG1Q07617 926 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 PARP10Q53GL7 1025 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 ZNF658Q5TYW1 1059 aaPredicted RBP16.39■□□□□ 0.21
SMTN-202ENST00000347557 BLIDQ8IZY5 108 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 CRNKL1Q9BZJ0 848 aaKnown RBP16.39■□□□□ 0.21
SMTN-202ENST00000347557 NDUFA10O95299 355 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 TRIM21P19474 475 aaKnown RBP16.39■□□□□ 0.21
SMTN-202ENST00000347557 ARHGAP25P42331 645 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 CCDC178Q5BJE1 867 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 DTHD1Q6ZMT9 781 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 TNFRSF25Q93038 417 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 VAT1LQ9HCJ6 419 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 DCP1AQ9NPI6 582 aaPredicted RBP16.39■□□□□ 0.21
SMTN-202ENST00000347557 LIMA1Q9UHB6 759 aaKnown RBP16.39■□□□□ 0.21
SMTN-202ENST00000347557 ANAPC4Q9UJX5 808 aa16.39■□□□□ 0.21
SMTN-202ENST00000347557 ECM29Q5VYK3 1845 aa16.38■□□□□ 0.21
SMTN-202ENST00000347557 LOC102724159A0A0B4J2E5 919 aa16.38■□□□□ 0.21
SMTN-202ENST00000347557 MACROD2A1Z1Q3 448 aa16.38■□□□□ 0.21
SMTN-202ENST00000347557 KLK7P49862 253 aa16.38■□□□□ 0.21
SMTN-202ENST00000347557 RCAN1P53805 252 aa16.38■□□□□ 0.21
SMTN-202ENST00000347557 PWP2Q15269 919 aaKnown RBP16.38■□□□□ 0.21
SMTN-202ENST00000347557 CCDC51Q96ER9 411 aa16.38■□□□□ 0.21
SMTN-202ENST00000347557 TSPYL1Q9H0U9 437 aa16.38■□□□□ 0.21
SMTN-202ENST00000347557 MINPP1Q9UNW1 487 aa16.38■□□□□ 0.21
SMTN-202ENST00000347557 EIF3JO75822 258 aaKnown RBP16.38■□□□□ 0.21
SMTN-202ENST00000347557 DDAH1O94760 285 aa16.38■□□□□ 0.21
SMTN-202ENST00000347557 CYP27A1Q02318 531 aa16.38■□□□□ 0.21
SMTN-202ENST00000347557 OR8K1Q8NGG5 319 aa16.38■□□□□ 0.21
SMTN-202ENST00000347557 TMEM60Q9H2L4 133 aa16.38■□□□□ 0.21
SMTN-202ENST00000347557 MKNK2Q9HBH9 465 aa16.38■□□□□ 0.21
SMTN-202ENST00000347557 RMND1Q9NWS8 449 aa16.38■□□□□ 0.21
SMTN-202ENST00000347557 MYH2Q9UKX2 1941 aa16.37■□□□□ 0.21
SMTN-202ENST00000347557 USP5P45974 858 aa16.37■□□□□ 0.21
SMTN-202ENST00000347557 MRPS25P82663 173 aaKnown RBP16.37■□□□□ 0.21
SMTN-202ENST00000347557 RAD51AP2Q09MP3 1159 aa16.37■□□□□ 0.21
SMTN-202ENST00000347557 MTA3Q9BTC8 594 aa16.37■□□□□ 0.21
SMTN-202ENST00000347557 BRIP1Q9BX63 1249 aa16.37■□□□□ 0.21
SMTN-202ENST00000347557 NID2Q14112 1375 aa16.37■□□□□ 0.21
SMTN-202ENST00000347557 USP17L3A6NCW0 530 aa16.37■□□□□ 0.21
SMTN-202ENST00000347557 USP17L4A6NCW7 530 aa16.37■□□□□ 0.21
SMTN-202ENST00000347557 PIP4K2BP78356 416 aa16.37■□□□□ 0.21
SMTN-202ENST00000347557 CASP8Q14790 479 aa16.37■□□□□ 0.21
SMTN-202ENST00000347557 USP17L1Q7RTZ2 530 aa16.37■□□□□ 0.21
SMTN-202ENST00000347557 CCDC148Q8NFR7 591 aa16.37■□□□□ 0.21
SMTN-202ENST00000347557 SEMA3EO15041 775 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 PFKFB3Q16875 520 aaPredicted RBP16.36■□□□□ 0.21
SMTN-202ENST00000347557 DZIP1Q86YF9 867 aaKnown RBP16.36■□□□□ 0.21
SMTN-202ENST00000347557 GSPT2Q8IYD1 628 aaKnown RBP16.36■□□□□ 0.21
SMTN-202ENST00000347557 HPS3Q969F9 1004 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 PLEKHA4Q9H4M7 779 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 AGPAT5Q9NUQ2 364 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 TOGARAM1Q9Y4F4 1720 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 POTEB2H3BUK9 544 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 IPO7O95373 1038 aaKnown RBP16.36■□□□□ 0.21
SMTN-202ENST00000347557 ATP1A1P05023 1023 aaKnown RBP16.36■□□□□ 0.21
SMTN-202ENST00000347557 KIF5BP33176 963 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 MTIF2P46199 727 aaKnown RBP16.36■□□□□ 0.21
SMTN-202ENST00000347557 STIM1Q13586 685 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 CSGALNACT2Q8N6G5 542 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 MB21D1Q8N884 522 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 PNMA1Q8ND90 353 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 JADE2Q9NQC1 790 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 STRCP1A6NGW2 1772 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 DDB1Q16531 1140 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 TYW1BQ6NUM6 668 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 LEKR1Q6ZMV7 388 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 C10orf67Q8IYJ2 551 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 SLC44A5Q8NCS7 719 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 NSUN4Q96CB9 384 aaKnown RBP16.36■□□□□ 0.21
SMTN-202ENST00000347557 PSMB7Q99436 277 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 UBXN6Q9BZV1 441 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 SAP30BPQ9UHR5 308 aaKnown RBP16.36■□□□□ 0.21
SMTN-202ENST00000347557 REXO2Q9Y3B8 237 aaKnown RBP16.36■□□□□ 0.21
SMTN-202ENST00000347557 LRP6O75581 1613 aa16.36■□□□□ 0.21
SMTN-202ENST00000347557 SLIT2O94813 1529 aa16.35■□□□□ 0.21
SMTN-202ENST00000347557 PSMA7O14818 248 aa16.35■□□□□ 0.21
SMTN-202ENST00000347557 MATR3P43243 847 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMTN-202ENST00000347557 TBC1D8BQ0IIM8 1120 aa16.35■□□□□ 0.21
SMTN-202ENST00000347557 WHAMMP3Q1A5X7 153 aa16.35■□□□□ 0.21
SMTN-202ENST00000347557 LETM2Q2VYF4 491 aa16.35■□□□□ 0.21
SMTN-202ENST00000347557 FKBP15Q5T1M5 1219 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms