RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 COL6A1P12109 1028 aa21.05■□□□□ 0.96
CKLF-202ENST00000345436 SLC4A3P48751 1232 aa21.05■□□□□ 0.96
CKLF-202ENST00000345436 STAT2P52630 851 aa21.05■□□□□ 0.96
CKLF-202ENST00000345436 NUCB1Q02818 461 aa21.05■□□□□ 0.96
CKLF-202ENST00000345436 CPXCR1Q8N123 301 aa21.05■□□□□ 0.96
CKLF-202ENST00000345436 LRRC47Q8N1G4 583 aaKnown RBP21.05■□□□□ 0.96
CKLF-202ENST00000345436 REPS2Q8NFH8 660 aa21.05■□□□□ 0.96
CKLF-202ENST00000345436 GMCL1Q96IK5 515 aa21.05■□□□□ 0.96
CKLF-202ENST00000345436 SENP6Q9GZR1 1112 aaPredicted RBP21.05■□□□□ 0.96
CKLF-202ENST00000345436 RBM27Q9P2N5 1060 aaKnown RBP21.05■□□□□ 0.96
CKLF-202ENST00000345436 CNPY2Q9Y2B0 182 aa21.05■□□□□ 0.96
CKLF-202ENST00000345436 ORC4O43929 436 aa21.04■□□□□ 0.96
CKLF-202ENST00000345436 CTDSPL2Q05D32 466 aa21.04■□□□□ 0.96
CKLF-202ENST00000345436 CHST13Q8NET6 341 aa21.04■□□□□ 0.96
CKLF-202ENST00000345436 EXOC6Q8TAG9 804 aa21.04■□□□□ 0.96
CKLF-202ENST00000345436 STAG1Q8WVM7 1258 aa21.04■□□□□ 0.96
CKLF-202ENST00000345436 TINF2Q9BSI4 451 aa21.04■□□□□ 0.96
CKLF-202ENST00000345436 OSBPL3Q9H4L5 887 aa21.04■□□□□ 0.96
CKLF-202ENST00000345436 SLC38A10Q9HBR0 1119 aa21.04■□□□□ 0.96
CKLF-202ENST00000345436 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.04■□□□□ 0.96
CKLF-202ENST00000345436 TMEM232C9JQI7 657 aa21.03■□□□□ 0.96
CKLF-202ENST00000345436 FGAP02671 866 aa21.03■□□□□ 0.96
CKLF-202ENST00000345436 PGK2P07205 417 aa21.03■□□□□ 0.96
CKLF-202ENST00000345436 NT5C2P49902 561 aa21.03■□□□□ 0.96
CKLF-202ENST00000345436 FXR1P51114 621 aaKnown RBP eCLIP21.03■□□□□ 0.96
CKLF-202ENST00000345436 ZNF792Q3KQV3 632 aa21.03■□□□□ 0.96
CKLF-202ENST00000345436 ANKRD35Q8N283 1001 aa21.03■□□□□ 0.96
CKLF-202ENST00000345436 TRPV1Q8NER1 839 aa21.03■□□□□ 0.96
CKLF-202ENST00000345436 FAM227BQ96M60 508 aa21.03■□□□□ 0.96
CKLF-202ENST00000345436 ZNF236Q9UL36 1845 aa21.02■□□□□ 0.96
CKLF-202ENST00000345436 PLA2G6O60733 806 aa21.02■□□□□ 0.96
CKLF-202ENST00000345436 HSPD1P10809 573 aaKnown RBP21.02■□□□□ 0.96
CKLF-202ENST00000345436 RARBP10826 455 aa21.02■□□□□ 0.96
CKLF-202ENST00000345436 VPS53Q5VIR6 699 aa21.02■□□□□ 0.96
CKLF-202ENST00000345436 RCSD1Q6JBY9 416 aa21.02■□□□□ 0.96
CKLF-202ENST00000345436 RNF41Q9H4P4 317 aaPredicted RBP21.02■□□□□ 0.96
CKLF-202ENST00000345436 DIAPH3Q9NSV4 1193 aa21.02■□□□□ 0.96
CKLF-202ENST00000345436 PRKAG2Q9UGJ0 569 aa21.02■□□□□ 0.96
CKLF-202ENST00000345436 RLFQ13129 1914 aa21.02■□□□□ 0.95
CKLF-202ENST00000345436 PFASO15067 1338 aa21.02■□□□□ 0.95
CKLF-202ENST00000345436 ZMYM6O95789 1325 aa21.02■□□□□ 0.95
CKLF-202ENST00000345436 CCDC171Q6TFL3 1326 aa21.02■□□□□ 0.95
CKLF-202ENST00000345436 A0A0G2JMZ2 1700 aa21.01■□□□□ 0.95
CKLF-202ENST00000345436 MYCNP04198 464 aaPredicted RBP21.01■□□□□ 0.95
CKLF-202ENST00000345436 SDSP20132 328 aa21.01■□□□□ 0.95
CKLF-202ENST00000345436 MCCP23508 829 aa21.01■□□□□ 0.95
CKLF-202ENST00000345436 BMP8BP34820 402 aa21.01■□□□□ 0.95
CKLF-202ENST00000345436 NMIQ13287 307 aaPredicted RBP21.01■□□□□ 0.95
CKLF-202ENST00000345436 TKFCQ3LXA3 575 aa21.01■□□□□ 0.95
CKLF-202ENST00000345436 RRP12Q5JTH9 1297 aaKnown RBP21.01■□□□□ 0.95
CKLF-202ENST00000345436 MFSD6Q6ZSS7 791 aa21.01■□□□□ 0.95
CKLF-202ENST00000345436 PLEKHM2Q8IWE5 1019 aa21.01■□□□□ 0.95
CKLF-202ENST00000345436 RAVER2Q9HCJ3 691 aaKnown RBP21.01■□□□□ 0.95
CKLF-202ENST00000345436 ZMYND8Q9ULU4 1186 aaPredicted RBP21.01■□□□□ 0.95
CKLF-202ENST00000345436 A0A0D9SFI3 127 aa21■□□□□ 0.95
CKLF-202ENST00000345436 IGHDP01880 384 aa21■□□□□ 0.95
CKLF-202ENST00000345436 FGRP09769 529 aa21■□□□□ 0.95
CKLF-202ENST00000345436 PRAMEF19Q5SWL8 479 aa21■□□□□ 0.95
CKLF-202ENST00000345436 ZNF467Q7Z7K2 595 aaPredicted RBP21■□□□□ 0.95
CKLF-202ENST00000345436 RNF180Q86T96 592 aa21■□□□□ 0.95
CKLF-202ENST00000345436 DCAF4Q8WV16 495 aa21■□□□□ 0.95
CKLF-202ENST00000345436 PRO3102Q9H379 93 aa21■□□□□ 0.95
CKLF-202ENST00000345436 SUPT16HQ9Y5B9 1047 aaKnown RBP21■□□□□ 0.95
CKLF-202ENST00000345436 SYNGAP1Q96PV0 1343 aa21■□□□□ 0.95
CKLF-202ENST00000345436 FOXP2O15409 715 aa20.99■□□□□ 0.95
CKLF-202ENST00000345436 AKR1A1P14550 325 aa20.99■□□□□ 0.95
CKLF-202ENST00000345436 GJC2Q5T442 439 aaPredicted RBP20.99■□□□□ 0.95
CKLF-202ENST00000345436 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.99■□□□□ 0.95
CKLF-202ENST00000345436 TTC14Q96N46 770 aa20.99■□□□□ 0.95
CKLF-202ENST00000345436 LBHD1Q9BQE6 289 aaPredicted RBP20.99■□□□□ 0.95
CKLF-202ENST00000345436 TCP11L1Q9NUJ3 509 aa20.99■□□□□ 0.95
CKLF-202ENST00000345436 PNMA2Q9UL42 364 aa20.99■□□□□ 0.95
CKLF-202ENST00000345436 GREB1LQ9C091 1923 aaPredicted RBP20.99■□□□□ 0.95
CKLF-202ENST00000345436 ZNF213O14771 459 aa20.98■□□□□ 0.95
CKLF-202ENST00000345436 TOP1P11387 765 aaKnown RBP20.98■□□□□ 0.95
CKLF-202ENST00000345436 LRRC26Q2I0M4 334 aa20.98■□□□□ 0.95
CKLF-202ENST00000345436 CCDC178Q5BJE1 867 aa20.98■□□□□ 0.95
CKLF-202ENST00000345436 AKNAD1Q5T1N1 836 aa20.98■□□□□ 0.95
CKLF-202ENST00000345436 GDF15Q99988 308 aa20.98■□□□□ 0.95
CKLF-202ENST00000345436 ACAD9Q9H845 621 aa20.98■□□□□ 0.95
CKLF-202ENST00000345436 XPNPEP3Q9NQH7 507 aa20.98■□□□□ 0.95
CKLF-202ENST00000345436 IL17RBQ9NRM6 502 aa20.98■□□□□ 0.95
CKLF-202ENST00000345436 FAM184BQ9ULE4 1060 aa20.98■□□□□ 0.95
CKLF-202ENST00000345436 RIPK3Q9Y572 518 aa20.98■□□□□ 0.95
CKLF-202ENST00000345436 SYN1P17600 705 aa20.97■□□□□ 0.95
CKLF-202ENST00000345436 CCDC96Q2M329 555 aa20.97■□□□□ 0.95
CKLF-202ENST00000345436 ANO1Q5XXA6 986 aa20.97■□□□□ 0.95
CKLF-202ENST00000345436 MAMDC4Q6UXC1 1216 aa20.97■□□□□ 0.95
CKLF-202ENST00000345436 ESR2Q92731 530 aa20.97■□□□□ 0.95
CKLF-202ENST00000345436 SPC25Q9HBM1 224 aa20.97■□□□□ 0.95
CKLF-202ENST00000345436 INCENPQ9NQS7 918 aa20.97■□□□□ 0.95
CKLF-202ENST00000345436 CTNNA3Q9UI47 895 aa20.97■□□□□ 0.95
CKLF-202ENST00000345436 DNAJC25-GNG10A0A024R161 153 aa20.96■□□□□ 0.95
CKLF-202ENST00000345436 NOVP48745 357 aa20.96■□□□□ 0.95
CKLF-202ENST00000345436 ATN1P54259 1190 aaPredicted RBP20.96■□□□□ 0.95
CKLF-202ENST00000345436 LRRC41Q15345 812 aa20.96■□□□□ 0.95
CKLF-202ENST00000345436 CWC27Q6UX04 472 aaKnown RBP20.96■□□□□ 0.95
CKLF-202ENST00000345436 UBE2OQ9C0C9 1292 aaKnown RBP20.96■□□□□ 0.95
CKLF-202ENST00000345436 ABHD16BQ9H3Z7 469 aa20.96■□□□□ 0.95
CKLF-202ENST00000345436 POTEB2H3BUK9 544 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms