RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 CAVIN2O95810 425 aa17.61■□□□□ 0.41
MBD1-203ENST00000339998 TAL1P17542 331 aaPredicted RBP17.61■□□□□ 0.41
MBD1-203ENST00000339998 SNAP25P60880 206 aa17.61■□□□□ 0.41
MBD1-203ENST00000339998 FMR1Q06787 632 aaKnown RBP eCLIP17.61■□□□□ 0.41
MBD1-203ENST00000339998 DPF2Q92785 391 aa17.61■□□□□ 0.41
MBD1-203ENST00000339998 XPO4Q9C0E2 1151 aaKnown RBP17.61■□□□□ 0.41
MBD1-203ENST00000339998 MYH8P13535 1937 aa17.61■□□□□ 0.41
MBD1-203ENST00000339998 CDAN1Q8IWY9 1227 aa17.61■□□□□ 0.41
MBD1-203ENST00000339998 C4orf32Q8N8J7 132 aa17.61■□□□□ 0.41
MBD1-203ENST00000339998 ZNF579Q8NAF0 562 aaKnown RBP17.61■□□□□ 0.41
MBD1-203ENST00000339998 PPP1R1BQ9UD71 204 aaPredicted RBP17.61■□□□□ 0.41
MBD1-203ENST00000339998 R3HCC1Q9Y3T6 440 aaKnown RBP17.61■□□□□ 0.41
MBD1-203ENST00000339998 HLA-DOAP06340 250 aa17.61■□□□□ 0.41
MBD1-203ENST00000339998 HMGB2P26583 209 aaKnown RBP17.61■□□□□ 0.41
MBD1-203ENST00000339998 CALML3P27482 149 aa17.61■□□□□ 0.41
MBD1-203ENST00000339998 LETM2Q2VYF4 491 aa17.61■□□□□ 0.41
MBD1-203ENST00000339998 CFAP100Q494V2 611 aa17.61■□□□□ 0.41
MBD1-203ENST00000339998 RRP36Q96EU6 259 aaKnown RBP17.61■□□□□ 0.41
MBD1-203ENST00000339998 MED15Q96RN5 788 aa17.61■□□□□ 0.41
MBD1-203ENST00000339998 IGKV6D-41A0A0C4DH26 115 aa17.6■□□□□ 0.41
MBD1-203ENST00000339998 KARSQ15046 597 aaKnown RBP17.6■□□□□ 0.41
MBD1-203ENST00000339998 CCDC96Q2M329 555 aa17.6■□□□□ 0.41
MBD1-203ENST00000339998 SPZ1Q9BXG8 430 aa17.6■□□□□ 0.41
MBD1-203ENST00000339998 FANCLQ9NW38 375 aa17.6■□□□□ 0.41
MBD1-203ENST00000339998 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.6■□□□□ 0.41
MBD1-203ENST00000339998 TCP10L2B9ZVM9 353 aa17.6■□□□□ 0.41
MBD1-203ENST00000339998 TTLL1O95922 423 aa17.6■□□□□ 0.41
MBD1-203ENST00000339998 RRP1BQ14684 758 aaKnown RBP17.6■□□□□ 0.41
MBD1-203ENST00000339998 SEPT2Q15019 361 aa17.6■□□□□ 0.41
MBD1-203ENST00000339998 KLHL10Q6JEL2 608 aa17.6■□□□□ 0.41
MBD1-203ENST00000339998 NUP88Q99567 741 aaPredicted RBP17.6■□□□□ 0.41
MBD1-203ENST00000339998 MTRQ99707 1265 aa17.6■□□□□ 0.41
MBD1-203ENST00000339998 PPP1R11O60927 126 aaPredicted RBP17.59■□□□□ 0.41
MBD1-203ENST00000339998 KCNA3P22001 575 aa17.59■□□□□ 0.41
MBD1-203ENST00000339998 NOLC1Q14978 699 aaKnown RBP eCLIP17.59■□□□□ 0.41
MBD1-203ENST00000339998 PAGE5Q96GU1 130 aa17.59■□□□□ 0.41
MBD1-203ENST00000339998 SEC63Q9UGP8 760 aaKnown RBP17.59■□□□□ 0.41
MBD1-203ENST00000339998 ATF5Q9Y2D1 282 aaPredicted RBP17.59■□□□□ 0.41
MBD1-203ENST00000339998 NOVP48745 357 aa17.59■□□□□ 0.41
MBD1-203ENST00000339998 STX17P56962 302 aa17.59■□□□□ 0.41
MBD1-203ENST00000339998 SARM1Q6SZW1 724 aa17.59■□□□□ 0.41
MBD1-203ENST00000339998 SMARCE1Q969G3 411 aa17.59■□□□□ 0.41
MBD1-203ENST00000339998 USP17L10C9JJH3 530 aa17.58■□□□□ 0.41
MBD1-203ENST00000339998 OFD1O75665 1012 aa17.58■□□□□ 0.41
MBD1-203ENST00000339998 ADGRF4Q8IZF3 695 aa17.58■□□□□ 0.41
MBD1-203ENST00000339998 EEF2P13639 858 aaKnown RBP17.58■□□□□ 0.4
MBD1-203ENST00000339998 UBE2SQ16763 222 aa17.58■□□□□ 0.4
MBD1-203ENST00000339998 TTLL6Q8N841 843 aa17.58■□□□□ 0.4
MBD1-203ENST00000339998 GJA10Q969M2 543 aa17.58■□□□□ 0.4
MBD1-203ENST00000339998 FERMT2Q96AC1 680 aa17.58■□□□□ 0.4
MBD1-203ENST00000339998 ZMYND12Q9H0C1 365 aa17.58■□□□□ 0.4
MBD1-203ENST00000339998 JMJD4Q9H9V9 463 aa17.58■□□□□ 0.4
MBD1-203ENST00000339998 SH3GLB2Q9NR46 395 aa17.58■□□□□ 0.4
MBD1-203ENST00000339998 COL4A5P29400 1685 aa17.58■□□□□ 0.4
MBD1-203ENST00000339998 GOLGA6L6A8MZA4 724 aa17.58■□□□□ 0.4
MBD1-203ENST00000339998 PSMD14O00487 310 aa17.58■□□□□ 0.4
MBD1-203ENST00000339998 CCNT1O60563 726 aaKnown RBP17.58■□□□□ 0.4
MBD1-203ENST00000339998 GOLGA8FQ08AF8 430 aa17.58■□□□□ 0.4
MBD1-203ENST00000339998 GOLGA8DPQ0D2H9 430 aa17.58■□□□□ 0.4
MBD1-203ENST00000339998 CERKLQ49MI3 558 aaPredicted RBP17.58■□□□□ 0.4
MBD1-203ENST00000339998 DNTTIP2Q5QJE6 756 aaKnown RBP17.58■□□□□ 0.4
MBD1-203ENST00000339998 SHTN1A0MZ66 631 aa17.57■□□□□ 0.4
MBD1-203ENST00000339998 CD44P16070 742 aaKnown RBP17.57■□□□□ 0.4
MBD1-203ENST00000339998 SARSP49591 514 aaKnown RBP17.57■□□□□ 0.4
MBD1-203ENST00000339998 SIAH1Q8IUQ4 282 aa17.57■□□□□ 0.4
MBD1-203ENST00000339998 LARGE2Q8N3Y3 721 aa17.57■□□□□ 0.4
MBD1-203ENST00000339998 CCDC148Q8NFR7 591 aa17.57■□□□□ 0.4
MBD1-203ENST00000339998 KIAA1524Q8TCG1 905 aa17.57■□□□□ 0.4
MBD1-203ENST00000339998 LRRC15Q8TF66 581 aa17.57■□□□□ 0.4
MBD1-203ENST00000339998 RIOX1Q9H6W3 641 aa17.57■□□□□ 0.4
MBD1-203ENST00000339998 QSER1Q2KHR3 1735 aa17.57■□□□□ 0.4
MBD1-203ENST00000339998 SF3B2Q13435 895 aaKnown RBP17.57■□□□□ 0.4
MBD1-203ENST00000339998 TBCKQ8TEA7 893 aa17.57■□□□□ 0.4
MBD1-203ENST00000339998 TMEM232C9JQI7 657 aa17.56■□□□□ 0.4
MBD1-203ENST00000339998 SLFN14P0C7P3 912 aa17.56■□□□□ 0.4
MBD1-203ENST00000339998 FANCCQ00597 558 aa17.56■□□□□ 0.4
MBD1-203ENST00000339998 ZNF543Q08ER8 600 aa17.56■□□□□ 0.4
MBD1-203ENST00000339998 CUL4BQ13620 913 aa17.56■□□□□ 0.4
MBD1-203ENST00000339998 MRFAP1L1Q96HT8 127 aa17.56■□□□□ 0.4
MBD1-203ENST00000339998 MAPK8IP1Q9UQF2 711 aa17.56■□□□□ 0.4
MBD1-203ENST00000339998 TMC6Q7Z403 805 aa17.56■□□□□ 0.4
MBD1-203ENST00000339998 SWAP70Q9UH65 585 aa17.56■□□□□ 0.4
MBD1-203ENST00000339998 SIPA1L1O43166 1804 aa17.56■□□□□ 0.4
MBD1-203ENST00000339998 BAG6P46379 1132 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 TRAPPC10P48553 1259 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 MYL5Q02045 173 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 MORC3Q14149 939 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 E2F4Q16254 413 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 SOGA3Q5TF21 947 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 SPICE1Q8N0Z3 855 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 BPIFA3Q9BQP9 254 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 LZTS2Q9BRK4 669 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 SAMSN1Q9NSI8 373 aaKnown RBP17.55■□□□□ 0.4
MBD1-203ENST00000339998 PI4KBQ9UBF8 816 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 MYH4Q9Y623 1939 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 SNHG28P0DPA3 235 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 EDIL3O43854 480 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 DPYDQ12882 1025 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 CSRNP1Q96S65 589 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 IDI2Q9BXS1 227 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms