RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 SPDL1Q96EA4 605 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 ACSBG1Q96GR2 724 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 SUCLG2Q96I99 432 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 CENPHQ9H3R5 247 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 NID2Q14112 1375 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 GOLGA6L10A6NI86 522 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 IFIT3O14879 490 aaKnown RBP9.34□□□□□ -0.91
SKA2-201ENST00000330137 N4BP3O15049 544 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 BMP15O95972 392 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 ALADP13716 330 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 RPS6KA3P51812 740 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 COPB1P53618 953 aaKnown RBP9.34□□□□□ -0.91
SKA2-201ENST00000330137 TTC19Q6DKK2 380 aaPredicted RBP9.34□□□□□ -0.91
SKA2-201ENST00000330137 MIS18BP1Q6P0N0 1132 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 RUFY4Q6ZNE9 571 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 DRAXINQ8NBI3 349 aaPredicted RBP9.34□□□□□ -0.91
SKA2-201ENST00000330137 OSBPL7Q9BZF2 842 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 FOXP1Q9H334 677 aaPredicted RBP9.34□□□□□ -0.91
SKA2-201ENST00000330137 SERTAD1Q9UHV2 236 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 LUC7L2Q9Y383 392 aaKnown RBP9.34□□□□□ -0.91
SKA2-201ENST00000330137 DCCP43146 1447 aa9.34□□□□□ -0.91
SKA2-201ENST00000330137 ABCC12Q96J65 1359 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 PHLPP1O60346 1717 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 MPHOSPH10O00566 681 aaKnown RBP9.33□□□□□ -0.92
SKA2-201ENST00000330137 POLR2DO15514 142 aaKnown RBP9.33□□□□□ -0.92
SKA2-201ENST00000330137 PPIP5K2O43314 1243 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 TACC1O75410 805 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 ABL1P00519 1130 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 TFRCP02786 760 aaKnown RBP9.33□□□□□ -0.92
SKA2-201ENST00000330137 ZFYP08048 801 aaPredicted RBP9.33□□□□□ -0.92
SKA2-201ENST00000330137 PDHBP11177 359 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 PAFAH1B1P43034 410 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 HERVK_113P62684 666 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 HDLBPQ00341 1268 aaKnown RBP9.33□□□□□ -0.92
SKA2-201ENST00000330137 SEPT2Q15019 361 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 KRT31Q15323 416 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 TTF1Q15361 905 aaPredicted RBP9.33□□□□□ -0.92
SKA2-201ENST00000330137 PTPN21Q16825 1174 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 CMPK2Q5EBM0 449 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 OTUD7BQ6GQQ9 843 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 BZW1Q7L1Q6 419 aaKnown RBP9.33□□□□□ -0.92
SKA2-201ENST00000330137 TRMT44Q8IYL2 757 aaKnown RBP9.33□□□□□ -0.92
SKA2-201ENST00000330137 CNKSR1Q969H4 720 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 NOD2Q9HC29 1040 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 SENP2Q9HC62 589 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 AATFQ9NY61 560 aaKnown RBP eCLIP9.33□□□□□ -0.92
SKA2-201ENST00000330137 NOP53Q9NZM5 478 aaKnown RBP9.33□□□□□ -0.92
SKA2-201ENST00000330137 PPP1R3GB7ZBB8 358 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 PRC1O43663 620 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 USO1O60763 962 aaKnown RBP9.33□□□□□ -0.92
SKA2-201ENST00000330137 IDEP14735 1019 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 FERP16591 822 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 ELF3P78545 371 aaPredicted RBP9.33□□□□□ -0.92
SKA2-201ENST00000330137 AGBL2Q5U5Z8 902 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 MSL1Q68DK7 614 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 CCDC129Q6ZRS4 1044 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 BRINP3Q76B58 766 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 CACNA2D4Q7Z3S7 1137 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 SDCCAG8Q86SQ7 713 aaPredicted RBP9.33□□□□□ -0.92
SKA2-201ENST00000330137 NOSTRINQ8IVI9 506 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 TSEN2Q8NCE0 465 aaKnown RBP9.33□□□□□ -0.92
SKA2-201ENST00000330137 CCT6BQ92526 530 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 DDX17Q92841 729 aaKnown RBP9.33□□□□□ -0.92
SKA2-201ENST00000330137 SCLT1Q96NL6 688 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 ORAI2Q96SN7 254 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 TMBIM4Q9HC24 238 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 PLCB1Q9NQ66 1216 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 HYOU1Q9Y4L1 999 aa9.33□□□□□ -0.92
SKA2-201ENST00000330137 GRID2IPA4D2P6 1211 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 ZNF233A6NK53 670 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 E7EVH7 732 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 H7C1D1 291 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 PDE2AO00408 941 aaPredicted RBP9.32□□□□□ -0.92
SKA2-201ENST00000330137 DNM1LO00429 736 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 BUB1BO60566 1050 aaPredicted RBP9.32□□□□□ -0.92
SKA2-201ENST00000330137 HSPA9P38646 679 aaKnown RBP9.32□□□□□ -0.92
SKA2-201ENST00000330137 KIF5AQ12840 1032 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 ITIH4Q14624 930 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 TCP11X2Q5H9J9 407 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 FIGNQ5HY92 759 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 GKAP1Q5VSY0 366 aaPredicted RBP9.32□□□□□ -0.92
SKA2-201ENST00000330137 STK11IPQ8N1F8 1099 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 AIDAQ96BJ3 306 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 LRRC1Q9BTT6 524 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 CNOT10Q9H9A5 744 aaKnown RBP9.32□□□□□ -0.92
SKA2-201ENST00000330137 HDAC6Q9UBN7 1215 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 A0A1W2PQJ5 194 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 ENC1O14682 589 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 RNF113AO15541 343 aaKnown RBP9.32□□□□□ -0.92
SKA2-201ENST00000330137 EEF1GP26641 437 aaKnown RBP9.32□□□□□ -0.92
SKA2-201ENST00000330137 GUCY1A3Q02108 690 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 ZNF268Q14587 947 aaPredicted RBP9.32□□□□□ -0.92
SKA2-201ENST00000330137 SAFBQ15424 915 aaKnown RBP eCLIP9.32□□□□□ -0.92
SKA2-201ENST00000330137 RABL6Q3YEC7 729 aaPredicted RBP9.32□□□□□ -0.92
SKA2-201ENST00000330137 SPDYCQ5MJ68 293 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 HAUS3Q68CZ6 603 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 NOC3LQ8WTT2 800 aaKnown RBP9.32□□□□□ -0.92
SKA2-201ENST00000330137 RRP36Q96EU6 259 aaKnown RBP9.32□□□□□ -0.92
SKA2-201ENST00000330137 SEC16BQ96JE7 1060 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 CALR3Q96L12 384 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms