RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ESR2Q92731 530 aa32.59■■■□□ 2.81
ATPAF1-201ENST00000329231 TEX13BQ9BXU2 312 aa32.59■■■□□ 2.81
ATPAF1-201ENST00000329231 IL25Q9H293 177 aa32.59■■■□□ 2.81
ATPAF1-201ENST00000329231 TNRC18O15417 2968 aaPredicted RBP32.58■■■□□ 2.81
ATPAF1-201ENST00000329231 TMEM232C9JQI7 657 aa32.58■■■□□ 2.81
ATPAF1-201ENST00000329231 STAT2P52630 851 aa32.58■■■□□ 2.81
ATPAF1-201ENST00000329231 CACNB2Q08289 660 aaPredicted RBP32.58■■■□□ 2.81
ATPAF1-201ENST00000329231 NPLOC4Q8TAT6 608 aa32.58■■■□□ 2.81
ATPAF1-201ENST00000329231 CHURC1Q8WUH1 139 aa32.58■■■□□ 2.81
ATPAF1-201ENST00000329231 ATP2A1O14983 1001 aa32.57■■■□□ 2.8
ATPAF1-201ENST00000329231 FDX1P10109 184 aa32.57■■■□□ 2.8
ATPAF1-201ENST00000329231 TOP1P11387 765 aaKnown RBP32.57■■■□□ 2.8
ATPAF1-201ENST00000329231 FAM160B2Q86V87 743 aa32.57■■■□□ 2.8
ATPAF1-201ENST00000329231 CRISPLD2Q9H0B8 497 aa32.57■■■□□ 2.8
ATPAF1-201ENST00000329231 SLC38A10Q9HBR0 1119 aa32.57■■■□□ 2.8
ATPAF1-201ENST00000329231 FLRT1Q9NZU1 646 aa32.57■■■□□ 2.8
ATPAF1-201ENST00000329231 PDE4DIPQ5VU43 2346 aa32.57■■■□□ 2.8
ATPAF1-201ENST00000329231 COL11A1P12107 1806 aaPredicted RBP32.56■■■□□ 2.8
ATPAF1-201ENST00000329231 ZNF236Q9UL36 1845 aa32.56■■■□□ 2.8
ATPAF1-201ENST00000329231 NEDD4P46934 1319 aa32.56■■■□□ 2.8
ATPAF1-201ENST00000329231 IKQ13123 557 aaPredicted RBP32.56■■■□□ 2.8
ATPAF1-201ENST00000329231 SNRNP48Q6IEG0 339 aaKnown RBP32.56■■■□□ 2.8
ATPAF1-201ENST00000329231 RCSD1Q6JBY9 416 aa32.56■■■□□ 2.8
ATPAF1-201ENST00000329231 TTC14Q96N46 770 aa32.56■■■□□ 2.8
ATPAF1-201ENST00000329231 MMP19Q99542 508 aa32.56■■■□□ 2.8
ATPAF1-201ENST00000329231 PLA2G6O60733 806 aa32.55■■■□□ 2.8
ATPAF1-201ENST00000329231 KCTD2Q14681 263 aa32.55■■■□□ 2.8
ATPAF1-201ENST00000329231 TMEM47Q9BQJ4 181 aa32.55■■■□□ 2.8
ATPAF1-201ENST00000329231 COBLO75128 1261 aa32.54■■■□□ 2.8
ATPAF1-201ENST00000329231 FARP2O94887 1054 aaPredicted RBP32.54■■■□□ 2.8
ATPAF1-201ENST00000329231 OAZ1P54368 228 aa32.54■■■□□ 2.8
ATPAF1-201ENST00000329231 OLFML2BQ68BL8 750 aa32.54■■■□□ 2.8
ATPAF1-201ENST00000329231 CPXCR1Q8N123 301 aa32.54■■■□□ 2.8
ATPAF1-201ENST00000329231 DCAF4Q8WV16 495 aa32.54■■■□□ 2.8
ATPAF1-201ENST00000329231 CHMP4CQ96CF2 233 aa32.54■■■□□ 2.8
ATPAF1-201ENST00000329231 MTMR7Q9Y216 660 aa32.54■■■□□ 2.8
ATPAF1-201ENST00000329231 MKI67P46013 3256 aaKnown RBP32.53■■■□□ 2.8
ATPAF1-201ENST00000329231 KCTD1Q719H9 257 aa32.53■■■□□ 2.8
ATPAF1-201ENST00000329231 UBE2Q1Q7Z7E8 422 aa32.53■■■□□ 2.8
ATPAF1-201ENST00000329231 LAMA4Q16363 1823 aa32.52■■■□□ 2.8
ATPAF1-201ENST00000329231 CCDC96Q2M329 555 aa32.52■■■□□ 2.8
ATPAF1-201ENST00000329231 CCDC178Q5BJE1 867 aa32.52■■■□□ 2.8
ATPAF1-201ENST00000329231 IQCA1Q86XH1 822 aa32.52■■■□□ 2.8
ATPAF1-201ENST00000329231 RAVER2Q9HCJ3 691 aaKnown RBP32.52■■■□□ 2.8
ATPAF1-201ENST00000329231 SGSM2O43147 1006 aa32.51■■■□□ 2.79
ATPAF1-201ENST00000329231 KDM4AO75164 1064 aa32.51■■■□□ 2.79
ATPAF1-201ENST00000329231 CCND3P30281 292 aaPredicted RBP32.51■■■□□ 2.79
ATPAF1-201ENST00000329231 KRT23Q9C075 422 aa32.51■■■□□ 2.79
ATPAF1-201ENST00000329231 CNNM2Q9H8M5 875 aa32.51■■■□□ 2.79
ATPAF1-201ENST00000329231 IGHA2P01877 340 aa32.5■■■□□ 2.79
ATPAF1-201ENST00000329231 CYP2C19P33261 490 aa32.5■■■□□ 2.79
ATPAF1-201ENST00000329231 SLC4A3P48751 1232 aa32.5■■■□□ 2.79
ATPAF1-201ENST00000329231 PRPF38BQ5VTL8 546 aaKnown RBP32.5■■■□□ 2.79
ATPAF1-201ENST00000329231 DGKHQ86XP1 1220 aa32.5■■■□□ 2.79
ATPAF1-201ENST00000329231 ANKLE1Q8NAG6 615 aa32.5■■■□□ 2.79
ATPAF1-201ENST00000329231 RIPK3Q9Y572 518 aa32.5■■■□□ 2.79
ATPAF1-201ENST00000329231 B4E1Z4 1266 aa32.49■■■□□ 2.79
ATPAF1-201ENST00000329231 RASGRP2Q7LDG7 609 aa32.48■■■□□ 2.79
ATPAF1-201ENST00000329231 MAML3Q96JK9 1138 aa32.48■■■□□ 2.79
ATPAF1-201ENST00000329231 ZKSCAN3Q9BRR0 538 aa32.48■■■□□ 2.79
ATPAF1-201ENST00000329231 FBXO40Q9UH90 709 aa32.48■■■□□ 2.79
ATPAF1-201ENST00000329231 OGDHLQ9ULD0 1010 aa32.48■■■□□ 2.79
ATPAF1-201ENST00000329231 DIS3Q9Y2L1 958 aaKnown RBP32.48■■■□□ 2.79
ATPAF1-201ENST00000329231 U3KPZ7 1027 aaPredicted RBP32.48■■■□□ 2.79
ATPAF1-201ENST00000329231 PGK2P07205 417 aa32.47■■■□□ 2.79
ATPAF1-201ENST00000329231 PTH1RQ03431 593 aa32.47■■■□□ 2.79
ATPAF1-201ENST00000329231 CHST13Q8NET6 341 aa32.47■■■□□ 2.79
ATPAF1-201ENST00000329231 CCDC136Q96JN2 1154 aa32.47■■■□□ 2.79
ATPAF1-201ENST00000329231 HTATIP2Q9BUP3 242 aa32.47■■■□□ 2.79
ATPAF1-201ENST00000329231 PRR12Q9ULL5 1215 aa32.47■■■□□ 2.79
ATPAF1-201ENST00000329231 ZSWIM5Q9P217 1185 aa32.46■■■□□ 2.79
ATPAF1-201ENST00000329231 PDHBP11177 359 aa32.45■■■□□ 2.79
ATPAF1-201ENST00000329231 CNGA1P29973 690 aa32.45■■■□□ 2.79
ATPAF1-201ENST00000329231 ZNF792Q3KQV3 632 aa32.45■■■□□ 2.79
ATPAF1-201ENST00000329231 BTNL9Q6UXG8 535 aa32.45■■■□□ 2.79
ATPAF1-201ENST00000329231 DHX30Q7L2E3 1194 aaKnown RBP eCLIP32.45■■■□□ 2.79
ATPAF1-201ENST00000329231 DDX11Q96FC9 970 aa32.45■■■□□ 2.79
ATPAF1-201ENST00000329231 ZSCAN10Q96SZ4 725 aaPredicted RBP32.45■■■□□ 2.79
ATPAF1-201ENST00000329231 MSCO60682 206 aa32.44■■■□□ 2.78
ATPAF1-201ENST00000329231 CYBAP13498 195 aa32.44■■■□□ 2.78
ATPAF1-201ENST00000329231 BMP2KLQ5H9B9 411 aa32.44■■■□□ 2.78
ATPAF1-201ENST00000329231 LHX8Q68G74 356 aa32.44■■■□□ 2.78
ATPAF1-201ENST00000329231 ANKS1AQ92625 1134 aa32.44■■■□□ 2.78
ATPAF1-201ENST00000329231 TRDNQ13061 729 aa32.43■■■□□ 2.78
ATPAF1-201ENST00000329231 TKFCQ3LXA3 575 aa32.43■■■□□ 2.78
ATPAF1-201ENST00000329231 TTBK2Q6IQ55 1244 aa32.43■■■□□ 2.78
ATPAF1-201ENST00000329231 NECAB2Q7Z6G3 386 aa32.43■■■□□ 2.78
ATPAF1-201ENST00000329231 PAWRQ96IZ0 340 aaKnown RBP32.43■■■□□ 2.78
ATPAF1-201ENST00000329231 UBAC1Q9BSL1 405 aa32.43■■■□□ 2.78
ATPAF1-201ENST00000329231 GPCPD1Q9NPB8 672 aa32.43■■■□□ 2.78
ATPAF1-201ENST00000329231 DDX20Q9UHI6 824 aaKnown RBP32.43■■■□□ 2.78
ATPAF1-201ENST00000329231 ZNF536O15090 1300 aa32.43■■■□□ 2.78
ATPAF1-201ENST00000329231 FRMPD2Q68DX3 1309 aaPredicted RBP32.43■■■□□ 2.78
ATPAF1-201ENST00000329231 ZNFX1Q9P2E3 1918 aaKnown RBP32.42■■■□□ 2.78
ATPAF1-201ENST00000329231 SNHG28P0DPA3 235 aa32.42■■■□□ 2.78
ATPAF1-201ENST00000329231 SYDE2Q5VT97 1194 aa32.42■■■□□ 2.78
ATPAF1-201ENST00000329231 CCDC174Q6PII3 467 aa32.42■■■□□ 2.78
ATPAF1-201ENST00000329231 KIAA1211Q6ZU35 1233 aa32.42■■■□□ 2.78
ATPAF1-201ENST00000329231 ANKRD35Q8N283 1001 aa32.42■■■□□ 2.78
ATPAF1-201ENST00000329231 TRPV1Q8NER1 839 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms