RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 DPH5Q9H2P9 285 aa18.38■□□□□ 0.53
PACS1-201ENST00000320580 UTP11Q9Y3A2 253 aaKnown RBP18.38■□□□□ 0.53
PACS1-201ENST00000320580 PIK3C2BO00750 1634 aa18.38■□□□□ 0.53
PACS1-201ENST00000320580 NEXMIFQ5QGS0 1516 aa18.38■□□□□ 0.53
PACS1-201ENST00000320580 DNM2P50570 870 aa18.38■□□□□ 0.53
PACS1-201ENST00000320580 AMPD3Q01432 767 aa18.38■□□□□ 0.53
PACS1-201ENST00000320580 NSMCE1Q8WV22 266 aa18.38■□□□□ 0.53
PACS1-201ENST00000320580 DIAPH2O60879 1101 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 FXR1P51114 621 aaKnown RBP eCLIP18.37■□□□□ 0.53
PACS1-201ENST00000320580 RPS6KA1Q15418 735 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 RESP18Q5W5W9 173 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 SLC30A9Q6PML9 568 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 DAAM2Q86T65 1068 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 CCHCR1Q8TD31 782 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 DBNLQ9UJU6 430 aaKnown RBP18.37■□□□□ 0.53
PACS1-201ENST00000320580 MDH1P40925 334 aaKnown RBP18.37■□□□□ 0.53
PACS1-201ENST00000320580 LRRC59Q96AG4 307 aaKnown RBP18.37■□□□□ 0.53
PACS1-201ENST00000320580 ARL8AQ96BM9 186 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 LRP2BPQ9P2M1 347 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 LAMC1P11047 1609 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 SASH1O94885 1247 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 RAPGEF1Q13905 1077 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 TCERG1LQ5VWI1 586 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 ARHGEF2Q92974 986 aaKnown RBP18.37■□□□□ 0.53
PACS1-201ENST00000320580 RASAL2Q9UJF2 1139 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 TCHHQ07283 1943 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 KCNK3O14649 394 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 CPP00450 1065 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 DRP2Q13474 957 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 RNPC3Q96LT9 517 aaKnown RBP18.37■□□□□ 0.53
PACS1-201ENST00000320580 CHP1Q99653 195 aa18.37■□□□□ 0.53
PACS1-201ENST00000320580 INTS9Q9NV88 658 aaKnown RBP18.37■□□□□ 0.53
PACS1-201ENST00000320580 PLEKHG3A1L390 1219 aa18.36■□□□□ 0.53
PACS1-201ENST00000320580 IL15P40933 162 aaPredicted RBP18.36■□□□□ 0.53
PACS1-201ENST00000320580 ANKRD42Q8N9B4 389 aa18.36■□□□□ 0.53
PACS1-201ENST00000320580 SUDS3Q9H7L9 328 aaPredicted RBP18.36■□□□□ 0.53
PACS1-201ENST00000320580 PDHA1P08559 390 aa18.36■□□□□ 0.53
PACS1-201ENST00000320580 EHHADHQ08426 723 aa18.36■□□□□ 0.53
PACS1-201ENST00000320580 ALDH8A1Q9H2A2 487 aaPredicted RBP18.36■□□□□ 0.53
PACS1-201ENST00000320580 NLRC4Q9NPP4 1024 aa18.36■□□□□ 0.53
PACS1-201ENST00000320580 MTRF1LQ9UGC7 380 aaKnown RBP18.36■□□□□ 0.53
PACS1-201ENST00000320580 TUBE1Q9UJT0 475 aa18.36■□□□□ 0.53
PACS1-201ENST00000320580 SPTY2D1Q68D10 685 aaPredicted RBP18.36■□□□□ 0.53
PACS1-201ENST00000320580 SEPT14Q6ZU15 432 aa18.36■□□□□ 0.53
PACS1-201ENST00000320580 CMTR1Q8N1G2 835 aaKnown RBP18.36■□□□□ 0.53
PACS1-201ENST00000320580 KAT2BQ92831 832 aa18.36■□□□□ 0.53
PACS1-201ENST00000320580 ATP6V1G3Q96LB4 118 aa18.36■□□□□ 0.53
PACS1-201ENST00000320580 ELAC2Q9BQ52 826 aaKnown RBP18.36■□□□□ 0.53
PACS1-201ENST00000320580 CARD10Q9BWT7 1032 aa18.36■□□□□ 0.53
PACS1-201ENST00000320580 RNF41Q9H4P4 317 aaPredicted RBP18.36■□□□□ 0.53
PACS1-201ENST00000320580 SALL3Q9BXA9 1300 aa18.36■□□□□ 0.53
PACS1-201ENST00000320580 B4DLN1 442 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 H7C1D1 291 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 DEXIO95424 95 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 C6orf163Q5TEZ5 329 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 STMN2Q93045 179 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 GSDMAQ96QA5 445 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 VCPKMTQ9H867 229 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 NHEJ1Q9H9Q4 299 aaPredicted RBP18.35■□□□□ 0.53
PACS1-201ENST00000320580 EDC4Q6P2E9 1401 aaKnown RBP18.35■□□□□ 0.53
PACS1-201ENST00000320580 RAD21O60216 631 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 PARP1P09874 1014 aaKnown RBP18.35■□□□□ 0.53
PACS1-201ENST00000320580 ZBTB16Q05516 673 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 CTNNBL1Q8WYA6 563 aaPredicted RBP18.35■□□□□ 0.53
PACS1-201ENST00000320580 hCG_1642624A0A1W2PR95 340 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 GPAA1O43292 621 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 RASSF7Q02833 373 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 DBN1Q16643 649 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 MROH2AA6NES4 1674 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 PREX1Q8TCU6 1659 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 CHRM1P11229 460 aaPredicted RBP18.35■□□□□ 0.53
PACS1-201ENST00000320580 PDE4DQ08499 809 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 IL17REQ8NFR9 667 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 RNF217Q8TC41 542 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 RRP36Q96EU6 259 aaKnown RBP18.35■□□□□ 0.53
PACS1-201ENST00000320580 KRT23Q9C075 422 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 ABCF2Q9UG63 623 aa18.35■□□□□ 0.53
PACS1-201ENST00000320580 LRRC7Q96NW7 1537 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 PFDN1O60925 122 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 PIK3R5Q8WYR1 880 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 NKIRAS1Q9NYS0 192 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 KIF28PB7ZC32 967 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 MAP3K12Q12852 859 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 DENND2CQ68D51 928 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 CEP128Q6ZU80 1094 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 SYMPKQ92797 1274 aaKnown RBP18.34■□□□□ 0.53
PACS1-201ENST00000320580 TMEM87BQ96K49 555 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 SLC4A4Q9Y6R1 1079 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 SLC39A6Q13433 755 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 NR1I3Q14994 352 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 SLC9C1Q4G0N8 1177 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 SPATA4Q8NEY3 305 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 WHAMMQ8TF30 809 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 CYFIP2Q96F07 1278 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 CALML4Q96GE6 196 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 ZIM3Q96PE6 472 aa18.34■□□□□ 0.53
PACS1-201ENST00000320580 EVI5O60447 810 aa18.33■□□□□ 0.53
PACS1-201ENST00000320580 FGAP02671 866 aa18.33■□□□□ 0.53
PACS1-201ENST00000320580 GCP02774 474 aa18.33■□□□□ 0.53
PACS1-201ENST00000320580 ALDH3A1P30838 453 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms