RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 PRPF38AQ8NAV1 312 aaKnown RBP20.84■□□□□ 0.93
EXOSC4-201ENST00000316052 CEP95Q96GE4 821 aa20.84■□□□□ 0.93
EXOSC4-201ENST00000316052 TEX13BQ9BXU2 312 aa20.84■□□□□ 0.93
EXOSC4-201ENST00000316052 XPNPEP3Q9NQH7 507 aa20.84■□□□□ 0.93
EXOSC4-201ENST00000316052 MTMR4Q9NYA4 1195 aa20.84■□□□□ 0.93
EXOSC4-201ENST00000316052 LENG1Q96BZ8 264 aaPredicted RBP20.83■□□□□ 0.93
EXOSC4-201ENST00000316052 PHF24Q9UPV7 400 aa20.83■□□□□ 0.93
EXOSC4-201ENST00000316052 EYSQ5T1H1 3165 aa20.83■□□□□ 0.92
EXOSC4-201ENST00000316052 TTC41PQ6P2S7 1318 aa20.82■□□□□ 0.92
EXOSC4-201ENST00000316052 DNAJC25-GNG10A0A024R161 153 aa20.82■□□□□ 0.92
EXOSC4-201ENST00000316052 TRIM43BA6NCK2 446 aa20.82■□□□□ 0.92
EXOSC4-201ENST00000316052 POTEB2H3BUK9 544 aa20.82■□□□□ 0.92
EXOSC4-201ENST00000316052 SLC4A3P48751 1232 aa20.82■□□□□ 0.92
EXOSC4-201ENST00000316052 TLE2Q04725 743 aa20.82■□□□□ 0.92
EXOSC4-201ENST00000316052 C1orf53Q5VUE5 145 aa20.82■□□□□ 0.92
EXOSC4-201ENST00000316052 CPXCR1Q8N123 301 aa20.82■□□□□ 0.92
EXOSC4-201ENST00000316052 TRIM43Q96BQ3 446 aaPredicted RBP20.82■□□□□ 0.92
EXOSC4-201ENST00000316052 PRDM5Q9NQX1 630 aaPredicted RBP20.82■□□□□ 0.92
EXOSC4-201ENST00000316052 PDLIM7Q9NR12 457 aa20.82■□□□□ 0.92
EXOSC4-201ENST00000316052 MCM3APO60318 1980 aa20.82■□□□□ 0.92
EXOSC4-201ENST00000316052 PRUNE2Q8WUY3 3088 aa20.81■□□□□ 0.92
EXOSC4-201ENST00000316052 ATP2A1O14983 1001 aa20.81■□□□□ 0.92
EXOSC4-201ENST00000316052 SNAI1O95863 264 aaPredicted RBP20.81■□□□□ 0.92
EXOSC4-201ENST00000316052 LRRC47Q8N1G4 583 aaKnown RBP20.81■□□□□ 0.92
EXOSC4-201ENST00000316052 NEDD1Q8NHV4 660 aa20.81■□□□□ 0.92
EXOSC4-201ENST00000316052 BADQ92934 168 aa20.81■□□□□ 0.92
EXOSC4-201ENST00000316052 KIFC2Q96AC6 838 aa20.81■□□□□ 0.92
EXOSC4-201ENST00000316052 DDX11Q96FC9 970 aa20.81■□□□□ 0.92
EXOSC4-201ENST00000316052 SLC38A10Q9HBR0 1119 aa20.81■□□□□ 0.92
EXOSC4-201ENST00000316052 ZNF287Q9HBT7 754 aa20.81■□□□□ 0.92
EXOSC4-201ENST00000316052 RAVER2Q9HCJ3 691 aaKnown RBP20.81■□□□□ 0.92
EXOSC4-201ENST00000316052 STXBP5LQ9Y2K9 1186 aa20.81■□□□□ 0.92
EXOSC4-201ENST00000316052 ERC2O15083 957 aa20.8■□□□□ 0.92
EXOSC4-201ENST00000316052 ZBED4O75132 1171 aa20.8■□□□□ 0.92
EXOSC4-201ENST00000316052 TTLL1O95922 423 aa20.8■□□□□ 0.92
EXOSC4-201ENST00000316052 SHHQ15465 462 aa20.8■□□□□ 0.92
EXOSC4-201ENST00000316052 ZMYM1Q5SVZ6 1142 aa20.8■□□□□ 0.92
EXOSC4-201ENST00000316052 C9orf50Q5SZB4 431 aa20.8■□□□□ 0.92
EXOSC4-201ENST00000316052 RNF180Q86T96 592 aa20.8■□□□□ 0.92
EXOSC4-201ENST00000316052 GMCL1P1Q8NEA9 526 aa20.8■□□□□ 0.92
EXOSC4-201ENST00000316052 FSD1Q9BTV5 496 aa20.8■□□□□ 0.92
EXOSC4-201ENST00000316052 FEM1BQ9UK73 627 aa20.8■□□□□ 0.92
EXOSC4-201ENST00000316052 CNPY2Q9Y2B0 182 aa20.8■□□□□ 0.92
EXOSC4-201ENST00000316052 ADAMTS4O75173 837 aa20.79■□□□□ 0.92
EXOSC4-201ENST00000316052 AKR1A1P14550 325 aa20.79■□□□□ 0.92
EXOSC4-201ENST00000316052 TFAP4Q01664 338 aa20.79■□□□□ 0.92
EXOSC4-201ENST00000316052 LRRFIP1Q32MZ4 808 aaKnown RBP20.79■□□□□ 0.92
EXOSC4-201ENST00000316052 SLFN13Q68D06 897 aa20.79■□□□□ 0.92
EXOSC4-201ENST00000316052 MAMDC4Q6UXC1 1216 aa20.79■□□□□ 0.92
EXOSC4-201ENST00000316052 MSL3Q8N5Y2 521 aaKnown RBP20.79■□□□□ 0.92
EXOSC4-201ENST00000316052 NACAP1Q9BZK3 213 aa20.79■□□□□ 0.92
EXOSC4-201ENST00000316052 SYNGAP1Q96PV0 1343 aa20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 CDH23Q9H251 3354 aa20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 PLIN4Q96Q06 1357 aa20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 A0A1W2PQ45 241 aaPredicted RBP20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 A0A1W2PQY0 241 aa20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 FOXP2O15409 715 aa20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 TSPY3P0CV98 308 aa20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 TSPY8P0CW00 308 aa20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 ITGB8P26012 769 aa20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 PPARAQ07869 468 aa20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 FAM109BQ6ICB4 259 aaPredicted RBP20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 FGD4Q96M96 766 aa20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 NAPBQ9H115 298 aa20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 INCENPQ9NQS7 918 aa20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 SYNPO2Q9UMS6 1093 aa20.78■□□□□ 0.92
EXOSC4-201ENST00000316052 DLL1O00548 723 aa20.77■□□□□ 0.92
EXOSC4-201ENST00000316052 BMP3P12645 472 aa20.77■□□□□ 0.92
EXOSC4-201ENST00000316052 MX1P20591 662 aa20.77■□□□□ 0.92
EXOSC4-201ENST00000316052 PDE4BQ07343 736 aa20.77■□□□□ 0.92
EXOSC4-201ENST00000316052 CCDC129Q6ZRS4 1044 aa20.77■□□□□ 0.92
EXOSC4-201ENST00000316052 CHMP4CQ96CF2 233 aa20.77■□□□□ 0.92
EXOSC4-201ENST00000316052 GUCD1Q96NT3 240 aa20.77■□□□□ 0.92
EXOSC4-201ENST00000316052 FAM184BQ9ULE4 1060 aa20.77■□□□□ 0.92
EXOSC4-201ENST00000316052 CTDP1Q9Y5B0 961 aaPredicted RBP20.77■□□□□ 0.92
EXOSC4-201ENST00000316052 SALL3Q9BXA9 1300 aa20.77■□□□□ 0.91
EXOSC4-201ENST00000316052 IRX5P78411 483 aaPredicted RBP20.76■□□□□ 0.91
EXOSC4-201ENST00000316052 ZNF467Q7Z7K2 595 aaPredicted RBP20.76■□□□□ 0.91
EXOSC4-201ENST00000316052 KLHDC9Q8NEP7 349 aa20.76■□□□□ 0.91
EXOSC4-201ENST00000316052 FAM161BQ96MY7 647 aa20.76■□□□□ 0.91
EXOSC4-201ENST00000316052 TSEN34Q9BSV6 310 aaKnown RBP20.76■□□□□ 0.91
EXOSC4-201ENST00000316052 ZHX1Q9UKY1 873 aaPredicted RBP20.76■□□□□ 0.91
EXOSC4-201ENST00000316052 TACC3Q9Y6A5 838 aa20.76■□□□□ 0.91
EXOSC4-201ENST00000316052 SYNRGQ9UMZ2 1314 aa20.76■□□□□ 0.91
EXOSC4-201ENST00000316052 MYADML2A6NDP7 307 aa20.75■□□□□ 0.91
EXOSC4-201ENST00000316052 TMEM232C9JQI7 657 aa20.75■□□□□ 0.91
EXOSC4-201ENST00000316052 ADCY6O43306 1168 aa20.75■□□□□ 0.91
EXOSC4-201ENST00000316052 ACLYP53396 1101 aa20.75■□□□□ 0.91
EXOSC4-201ENST00000316052 OAZ1P54368 228 aa20.75■□□□□ 0.91
EXOSC4-201ENST00000316052 CTDSPL2Q05D32 466 aa20.75■□□□□ 0.91
EXOSC4-201ENST00000316052 ACVR2BQ13705 512 aa20.75■□□□□ 0.91
EXOSC4-201ENST00000316052 KCNA10Q16322 511 aa20.75■□□□□ 0.91
EXOSC4-201ENST00000316052 CCSAPQ6IQ19 270 aaPredicted RBP20.75■□□□□ 0.91
EXOSC4-201ENST00000316052 ANKRD35Q8N283 1001 aa20.75■□□□□ 0.91
EXOSC4-201ENST00000316052 CHST13Q8NET6 341 aa20.75■□□□□ 0.91
EXOSC4-201ENST00000316052 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.75■□□□□ 0.91
EXOSC4-201ENST00000316052 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.75■□□□□ 0.91
EXOSC4-201ENST00000316052 PQBP1O60828 265 aaKnown RBP20.74■□□□□ 0.91
EXOSC4-201ENST00000316052 SLC3A2P08195 630 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms