RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 BMP3P12645 472 aa23.49■■□□□ 1.35
PDZRN3-202ENST00000308537 HAND2P61296 217 aa23.49■■□□□ 1.35
PDZRN3-202ENST00000308537 MFSD14CQ5VZR4 134 aa23.49■■□□□ 1.35
PDZRN3-202ENST00000308537 CWC27Q6UX04 472 aaKnown RBP23.49■■□□□ 1.35
PDZRN3-202ENST00000308537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.49■■□□□ 1.35
PDZRN3-202ENST00000308537 DPP9Q86TI2 863 aa23.49■■□□□ 1.35
PDZRN3-202ENST00000308537 MAML3Q96JK9 1138 aa23.49■■□□□ 1.35
PDZRN3-202ENST00000308537 TEX13BQ9BXU2 312 aa23.49■■□□□ 1.35
PDZRN3-202ENST00000308537 FEM1BQ9UK73 627 aa23.49■■□□□ 1.35
PDZRN3-202ENST00000308537 PFASO15067 1338 aa23.49■■□□□ 1.35
PDZRN3-202ENST00000308537 RANBP6O60518 1105 aaKnown RBP23.48■■□□□ 1.35
PDZRN3-202ENST00000308537 FCER1AP12319 257 aa23.48■■□□□ 1.35
PDZRN3-202ENST00000308537 ZNF792Q3KQV3 632 aa23.48■■□□□ 1.35
PDZRN3-202ENST00000308537 TTC22Q5TAA0 569 aa23.48■■□□□ 1.35
PDZRN3-202ENST00000308537 RCSD1Q6JBY9 416 aa23.48■■□□□ 1.35
PDZRN3-202ENST00000308537 STAG1Q8WVM7 1258 aa23.48■■□□□ 1.35
PDZRN3-202ENST00000308537 HTATIP2Q9BUP3 242 aa23.48■■□□□ 1.35
PDZRN3-202ENST00000308537 TCP11L1Q9NUJ3 509 aa23.48■■□□□ 1.35
PDZRN3-202ENST00000308537 STX8Q9UNK0 236 aa23.48■■□□□ 1.35
PDZRN3-202ENST00000308537 PGK2P07205 417 aa23.47■■□□□ 1.35
PDZRN3-202ENST00000308537 SNRNP48Q6IEG0 339 aaKnown RBP23.47■■□□□ 1.35
PDZRN3-202ENST00000308537 NECAB2Q7Z6G3 386 aa23.47■■□□□ 1.35
PDZRN3-202ENST00000308537 KIFC2Q96AC6 838 aa23.47■■□□□ 1.35
PDZRN3-202ENST00000308537 ZNF536O15090 1300 aa23.47■■□□□ 1.35
PDZRN3-202ENST00000308537 DNAJC25-GNG10A0A024R161 153 aa23.46■■□□□ 1.35
PDZRN3-202ENST00000308537 PLA2G6O60733 806 aa23.46■■□□□ 1.35
PDZRN3-202ENST00000308537 MCCP23508 829 aa23.46■■□□□ 1.35
PDZRN3-202ENST00000308537 NEDD4P46934 1319 aa23.46■■□□□ 1.35
PDZRN3-202ENST00000308537 AKNAD1Q5T1N1 836 aa23.46■■□□□ 1.35
PDZRN3-202ENST00000308537 DPF3Q92784 378 aa23.46■■□□□ 1.35
PDZRN3-202ENST00000308537 MMP19Q99542 508 aa23.46■■□□□ 1.35
PDZRN3-202ENST00000308537 RAVER2Q9HCJ3 691 aaKnown RBP23.46■■□□□ 1.35
PDZRN3-202ENST00000308537 DDX20Q9UHI6 824 aaKnown RBP23.46■■□□□ 1.35
PDZRN3-202ENST00000308537 DNAH12Q6ZR08 3092 aa23.46■■□□□ 1.35
PDZRN3-202ENST00000308537 MCM3APO60318 1980 aa23.45■■□□□ 1.35
PDZRN3-202ENST00000308537 LAMA3Q16787 3333 aa23.45■■□□□ 1.34
PDZRN3-202ENST00000308537 TMEM232C9JQI7 657 aa23.45■■□□□ 1.34
PDZRN3-202ENST00000308537 SLC34A2O95436 690 aa23.45■■□□□ 1.34
PDZRN3-202ENST00000308537 COPB2P35606 906 aa23.45■■□□□ 1.34
PDZRN3-202ENST00000308537 FGD4Q96M96 766 aa23.45■■□□□ 1.34
PDZRN3-202ENST00000308537 PRO3102Q9H379 93 aa23.45■■□□□ 1.34
PDZRN3-202ENST00000308537 DIAPH3Q9NSV4 1193 aa23.45■■□□□ 1.34
PDZRN3-202ENST00000308537 DIS3Q9Y2L1 958 aaKnown RBP23.45■■□□□ 1.34
PDZRN3-202ENST00000308537 LCTP09848 1927 aa23.44■■□□□ 1.34
PDZRN3-202ENST00000308537 HIP1O00291 1037 aa23.44■■□□□ 1.34
PDZRN3-202ENST00000308537 SLC1A4P43007 532 aa23.44■■□□□ 1.34
PDZRN3-202ENST00000308537 OAZ1P54368 228 aa23.44■■□□□ 1.34
PDZRN3-202ENST00000308537 MFAP1P55081 439 aaKnown RBP23.44■■□□□ 1.34
PDZRN3-202ENST00000308537 PPP4R3BQ5MIZ7 849 aa23.44■■□□□ 1.34
PDZRN3-202ENST00000308537 PRAMEF19Q5SWL8 479 aa23.44■■□□□ 1.34
PDZRN3-202ENST00000308537 KCTD1Q719H9 257 aa23.44■■□□□ 1.34
PDZRN3-202ENST00000308537 CPXCR1Q8N123 301 aa23.44■■□□□ 1.34
PDZRN3-202ENST00000308537 TMEM47Q9BQJ4 181 aa23.44■■□□□ 1.34
PDZRN3-202ENST00000308537 DSCC1Q9BVC3 393 aa23.44■■□□□ 1.34
PDZRN3-202ENST00000308537 PCP11498 1178 aaKnown RBP23.43■■□□□ 1.34
PDZRN3-202ENST00000308537 STAT2P52630 851 aa23.43■■□□□ 1.34
PDZRN3-202ENST00000308537 KCTD2Q14681 263 aa23.43■■□□□ 1.34
PDZRN3-202ENST00000308537 RRP12Q5JTH9 1297 aaKnown RBP23.43■■□□□ 1.34
PDZRN3-202ENST00000308537 CHMP4CQ96CF2 233 aa23.43■■□□□ 1.34
PDZRN3-202ENST00000308537 C11orf49Q9H6J7 331 aa23.43■■□□□ 1.34
PDZRN3-202ENST00000308537 COLQQ9Y215 455 aaPredicted RBP23.43■■□□□ 1.34
PDZRN3-202ENST00000308537 SZT2Q5T011 3432 aa23.43■■□□□ 1.34
PDZRN3-202ENST00000308537 ZBED4O75132 1171 aa23.42■■□□□ 1.34
PDZRN3-202ENST00000308537 HABP4Q5JVS0 413 aaKnown RBP23.42■■□□□ 1.34
PDZRN3-202ENST00000308537 TINF2Q9BSI4 451 aa23.42■■□□□ 1.34
PDZRN3-202ENST00000308537 SLC5A4Q9NY91 659 aa23.42■■□□□ 1.34
PDZRN3-202ENST00000308537 SEPT4O43236 478 aa23.41■■□□□ 1.34
PDZRN3-202ENST00000308537 MSCO60682 206 aa23.41■■□□□ 1.34
PDZRN3-202ENST00000308537 FDX1P10109 184 aa23.41■■□□□ 1.34
PDZRN3-202ENST00000308537 TOP1P11387 765 aaKnown RBP23.41■■□□□ 1.34
PDZRN3-202ENST00000308537 MFSD6Q6ZSS7 791 aa23.41■■□□□ 1.34
PDZRN3-202ENST00000308537 FAM160B2Q86V87 743 aa23.41■■□□□ 1.34
PDZRN3-202ENST00000308537 TOMM22Q9NS69 142 aa23.41■■□□□ 1.34
PDZRN3-202ENST00000308537 PRR12Q9ULL5 1215 aa23.41■■□□□ 1.34
PDZRN3-202ENST00000308537 SNHG28P0DPA3 235 aa23.4■■□□□ 1.34
PDZRN3-202ENST00000308537 TAL1P17542 331 aaPredicted RBP23.4■■□□□ 1.34
PDZRN3-202ENST00000308537 TTBK2Q6IQ55 1244 aa23.4■■□□□ 1.34
PDZRN3-202ENST00000308537 BTNL9Q6UXG8 535 aa23.4■■□□□ 1.34
PDZRN3-202ENST00000308537 CHURC1Q8WUH1 139 aa23.4■■□□□ 1.34
PDZRN3-202ENST00000308537 ZNF865P0CJ78 1059 aaPredicted RBP23.39■■□□□ 1.33
PDZRN3-202ENST00000308537 CNGA1P29973 690 aa23.39■■□□□ 1.33
PDZRN3-202ENST00000308537 MAMDC4Q6UXC1 1216 aa23.39■■□□□ 1.33
PDZRN3-202ENST00000308537 CHST13Q8NET6 341 aa23.39■■□□□ 1.33
PDZRN3-202ENST00000308537 DCAF4Q8WV16 495 aa23.39■■□□□ 1.33
PDZRN3-202ENST00000308537 AGBL1Q96MI9 1066 aa23.39■■□□□ 1.33
PDZRN3-202ENST00000308537 NRBP1Q9UHY1 535 aa23.39■■□□□ 1.33
PDZRN3-202ENST00000308537 ZNF213O14771 459 aa23.38■■□□□ 1.33
PDZRN3-202ENST00000308537 EVI5O60447 810 aa23.38■■□□□ 1.33
PDZRN3-202ENST00000308537 SNAI1O95863 264 aaPredicted RBP23.38■■□□□ 1.33
PDZRN3-202ENST00000308537 PDHBP11177 359 aa23.38■■□□□ 1.33
PDZRN3-202ENST00000308537 CHMLP26374 656 aa23.38■■□□□ 1.33
PDZRN3-202ENST00000308537 SNAP25P60880 206 aa23.38■■□□□ 1.33
PDZRN3-202ENST00000308537 ANO1Q5XXA6 986 aa23.38■■□□□ 1.33
PDZRN3-202ENST00000308537 TTC14Q96N46 770 aa23.38■■□□□ 1.33
PDZRN3-202ENST00000308537 RNF41Q9H4P4 317 aaPredicted RBP23.38■■□□□ 1.33
PDZRN3-202ENST00000308537 NR2E3Q9Y5X4 410 aa23.38■■□□□ 1.33
PDZRN3-202ENST00000308537 RAD50Q92878 1312 aa23.37■■□□□ 1.33
PDZRN3-202ENST00000308537 LRRC26Q2I0M4 334 aa23.37■■□□□ 1.33
PDZRN3-202ENST00000308537 CHRDL2Q6WN34 429 aa23.37■■□□□ 1.33
PDZRN3-202ENST00000308537 RANBP17Q9H2T7 1088 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms