RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 LRRC47Q8N1G4 583 aaKnown RBP16.69■□□□□ 0.26
TPM1-202ENST00000288398 ANKRD35Q8N283 1001 aa16.69■□□□□ 0.26
TPM1-202ENST00000288398 MSL3Q8N5Y2 521 aaKnown RBP16.69■□□□□ 0.26
TPM1-202ENST00000288398 SLC17A8Q8NDX2 589 aa16.69■□□□□ 0.26
TPM1-202ENST00000288398 MTMR4Q9NYA4 1195 aa16.69■□□□□ 0.26
TPM1-202ENST00000288398 FBXO40Q9UH90 709 aa16.69■□□□□ 0.26
TPM1-202ENST00000288398 PPARAQ07869 468 aa16.68■□□□□ 0.26
TPM1-202ENST00000288398 TRIM60Q495X7 471 aa16.68■□□□□ 0.26
TPM1-202ENST00000288398 SLFN13Q68D06 897 aa16.68■□□□□ 0.26
TPM1-202ENST00000288398 GMCL1P1Q8NEA9 526 aa16.68■□□□□ 0.26
TPM1-202ENST00000288398 REPS2Q8NFH8 660 aa16.68■□□□□ 0.26
TPM1-202ENST00000288398 ZHX1Q9UKY1 873 aaPredicted RBP16.68■□□□□ 0.26
TPM1-202ENST00000288398 PCDHB15Q9Y5E8 787 aa16.68■□□□□ 0.26
TPM1-202ENST00000288398 TSPY2A6NKD2 308 aa16.67■□□□□ 0.26
TPM1-202ENST00000288398 FDX1P10109 184 aa16.67■□□□□ 0.26
TPM1-202ENST00000288398 BMP3P12645 472 aa16.67■□□□□ 0.26
TPM1-202ENST00000288398 RRP1P56182 461 aaKnown RBP16.67■□□□□ 0.26
TPM1-202ENST00000288398 TFAP4Q01664 338 aa16.67■□□□□ 0.26
TPM1-202ENST00000288398 ANKRD45Q5TZF3 282 aa16.67■□□□□ 0.26
TPM1-202ENST00000288398 NEDD1Q8NHV4 660 aa16.67■□□□□ 0.26
TPM1-202ENST00000288398 PI4K2BQ8TCG2 481 aa16.67■□□□□ 0.26
TPM1-202ENST00000288398 MKL1Q969V6 931 aa16.67■□□□□ 0.26
TPM1-202ENST00000288398 SEC62Q99442 399 aaKnown RBP16.67■□□□□ 0.26
TPM1-202ENST00000288398 SPC25Q9HBM1 224 aa16.67■□□□□ 0.26
TPM1-202ENST00000288398 RAVER2Q9HCJ3 691 aaKnown RBP16.67■□□□□ 0.26
TPM1-202ENST00000288398 FAM184BQ9ULE4 1060 aa16.67■□□□□ 0.26
TPM1-202ENST00000288398 COL11A1P12107 1806 aaPredicted RBP16.67■□□□□ 0.26
TPM1-202ENST00000288398 PARP14Q460N5 1801 aa16.67■□□□□ 0.26
TPM1-202ENST00000288398 SYNGAP1Q96PV0 1343 aa16.67■□□□□ 0.26
TPM1-202ENST00000288398 SZT2Q5T011 3432 aa16.67■□□□□ 0.26
TPM1-202ENST00000288398 IGKV6D-41A0A0C4DH26 115 aa16.66■□□□□ 0.26
TPM1-202ENST00000288398 ATP2A1O14983 1001 aa16.66■□□□□ 0.26
TPM1-202ENST00000288398 PGK1P00558 417 aa16.66■□□□□ 0.26
TPM1-202ENST00000288398 STAT2P52630 851 aa16.66■□□□□ 0.26
TPM1-202ENST00000288398 OAZ1P54368 228 aa16.66■□□□□ 0.26
TPM1-202ENST00000288398 ZMYM1Q5SVZ6 1142 aa16.66■□□□□ 0.26
TPM1-202ENST00000288398 FAM160B2Q86V87 743 aa16.66■□□□□ 0.26
TPM1-202ENST00000288398 CHST13Q8NET6 341 aa16.66■□□□□ 0.26
TPM1-202ENST00000288398 CHURC1Q8WUH1 139 aa16.66■□□□□ 0.26
TPM1-202ENST00000288398 NUP133Q8WUM0 1156 aa16.66■□□□□ 0.26
TPM1-202ENST00000288398 SLC38A10Q9HBR0 1119 aa16.66■□□□□ 0.26
TPM1-202ENST00000288398 STX8Q9UNK0 236 aa16.66■□□□□ 0.26
TPM1-202ENST00000288398 PHF24Q9UPV7 400 aa16.66■□□□□ 0.26
TPM1-202ENST00000288398 GREB1LQ9C091 1923 aaPredicted RBP16.65■□□□□ 0.26
TPM1-202ENST00000288398 TMEM232C9JQI7 657 aa16.65■□□□□ 0.26
TPM1-202ENST00000288398 TAL1P17542 331 aaPredicted RBP16.65■□□□□ 0.26
TPM1-202ENST00000288398 SLC1A4P43007 532 aa16.65■□□□□ 0.26
TPM1-202ENST00000288398 Q7L0L9 218 aa16.65■□□□□ 0.26
TPM1-202ENST00000288398 OTUD7AQ8TE49 926 aaPredicted RBP16.65■□□□□ 0.26
TPM1-202ENST00000288398 EVI5LQ96CN4 794 aa16.65■□□□□ 0.26
TPM1-202ENST00000288398 TOMM22Q9NS69 142 aa16.65■□□□□ 0.26
TPM1-202ENST00000288398 HOMER2Q9NSB8 354 aa16.65■□□□□ 0.26
TPM1-202ENST00000288398 RIPK3Q9Y572 518 aa16.65■□□□□ 0.26
TPM1-202ENST00000288398 TACC3Q9Y6A5 838 aa16.65■□□□□ 0.26
TPM1-202ENST00000288398 PLIN4Q96Q06 1357 aa16.64■□□□□ 0.26
TPM1-202ENST00000288398 PQBP1O60828 265 aaKnown RBP16.64■□□□□ 0.25
TPM1-202ENST00000288398 ZNF865P0CJ78 1059 aaPredicted RBP16.64■□□□□ 0.25
TPM1-202ENST00000288398 TLE2Q04725 743 aa16.64■□□□□ 0.25
TPM1-202ENST00000288398 SNX17Q15036 470 aa16.64■□□□□ 0.25
TPM1-202ENST00000288398 C1orf53Q5VUE5 145 aa16.64■□□□□ 0.25
TPM1-202ENST00000288398 ZNF467Q7Z7K2 595 aaPredicted RBP16.64■□□□□ 0.25
TPM1-202ENST00000288398 TSEN34Q9BSV6 310 aaKnown RBP16.64■□□□□ 0.25
TPM1-202ENST00000288398 STARD7Q9NQZ5 370 aa16.64■□□□□ 0.25
TPM1-202ENST00000288398 PDLIM7Q9NR12 457 aa16.64■□□□□ 0.25
TPM1-202ENST00000288398 MYH4Q9Y623 1939 aa16.63■□□□□ 0.25
TPM1-202ENST00000288398 A0A1W2PQ45 241 aaPredicted RBP16.63■□□□□ 0.25
TPM1-202ENST00000288398 A0A1W2PQY0 241 aa16.63■□□□□ 0.25
TPM1-202ENST00000288398 RANBP6O60518 1105 aaKnown RBP16.63■□□□□ 0.25
TPM1-202ENST00000288398 CLTBP09497 229 aa16.63■□□□□ 0.25
TPM1-202ENST00000288398 MAMDC4Q6UXC1 1216 aa16.63■□□□□ 0.25
TPM1-202ENST00000288398 BADQ92934 168 aa16.63■□□□□ 0.25
TPM1-202ENST00000288398 VTI1AQ96AJ9 217 aa16.63■□□□□ 0.25
TPM1-202ENST00000288398 CHMP4CQ96CF2 233 aa16.63■□□□□ 0.25
TPM1-202ENST00000288398 GMCL1Q96IK5 515 aa16.63■□□□□ 0.25
TPM1-202ENST00000288398 ABHD16BQ9H3Z7 469 aa16.63■□□□□ 0.25
TPM1-202ENST00000288398 ACAD9Q9H845 621 aa16.63■□□□□ 0.25
TPM1-202ENST00000288398 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.63■□□□□ 0.25
TPM1-202ENST00000288398 STXBP5LQ9Y2K9 1186 aa16.63■□□□□ 0.25
TPM1-202ENST00000288398 PLXNA1Q9UIW2 1896 aa16.63■□□□□ 0.25
TPM1-202ENST00000288398 ZNFX1Q9P2E3 1918 aaKnown RBP16.62■□□□□ 0.25
TPM1-202ENST00000288398 DNAJC25-GNG10A0A024R161 153 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 MOXD2PA6NHM9 499 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 DCDC2CA8MYV0 355 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 POTEB2H3BUK9 544 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 RAG1P15918 1043 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 MCCP23508 829 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 CTDSPL2Q05D32 466 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 ACVR2BQ13705 512 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 CCDC96Q2M329 555 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 TKFCQ3LXA3 575 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 ZNF697Q5TEC3 545 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 CCDC129Q6ZRS4 1044 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 NOL8Q76FK4 1167 aaKnown RBP16.62■□□□□ 0.25
TPM1-202ENST00000288398 PCSK9Q8NBP7 692 aaKnown RBP16.62■□□□□ 0.25
TPM1-202ENST00000288398 STAG1Q8WVM7 1258 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 LENG1Q96BZ8 264 aaPredicted RBP16.62■□□□□ 0.25
TPM1-202ENST00000288398 CRBNQ96SW2 442 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 HELLSQ9NRZ9 838 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 MTMR10Q9NXD2 777 aa16.62■□□□□ 0.25
TPM1-202ENST00000288398 MTMR7Q9Y216 660 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms