RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 TFAP4Q01664 338 aa28.36■■■□□ 2.13
ROM1-201ENST00000278833 GOLGA8FQ08AF8 430 aa28.36■■■□□ 2.13
ROM1-201ENST00000278833 GOLGA8DPQ0D2H9 430 aa28.36■■■□□ 2.13
ROM1-201ENST00000278833 AMOTL1Q8IY63 956 aa28.36■■■□□ 2.13
ROM1-201ENST00000278833 LAD1O00515 517 aa28.36■■■□□ 2.13
ROM1-201ENST00000278833 LDHCP07864 332 aa28.36■■■□□ 2.13
ROM1-201ENST00000278833 TXLNAP40222 546 aa28.36■■■□□ 2.13
ROM1-201ENST00000278833 DMTNQ08495 405 aa28.36■■■□□ 2.13
ROM1-201ENST00000278833 DDR1Q08345 913 aa28.35■■■□□ 2.13
ROM1-201ENST00000278833 ZNF658Q5TYW1 1059 aaPredicted RBP28.35■■■□□ 2.13
ROM1-201ENST00000278833 MAD2L2Q9UI95 211 aa28.35■■■□□ 2.13
ROM1-201ENST00000278833 FOCADQ5VW36 1801 aa28.35■■■□□ 2.13
ROM1-201ENST00000278833 TADA3O75528 432 aa28.34■■■□□ 2.13
ROM1-201ENST00000278833 TPM1P09493 284 aa28.34■■■□□ 2.13
ROM1-201ENST00000278833 USP5P45974 858 aa28.34■■■□□ 2.13
ROM1-201ENST00000278833 HSP90AA4PQ58FG1 418 aa28.34■■■□□ 2.13
ROM1-201ENST00000278833 MTRQ99707 1265 aa28.34■■■□□ 2.13
ROM1-201ENST00000278833 FAM205AQ6ZU69 1335 aa28.34■■■□□ 2.13
ROM1-201ENST00000278833 MYH1P12882 1939 aa28.34■■■□□ 2.13
ROM1-201ENST00000278833 PRPHP41219 470 aa28.34■■■□□ 2.13
ROM1-201ENST00000278833 ADKP55263 362 aaKnown RBP28.34■■■□□ 2.13
ROM1-201ENST00000278833 ZNF804AQ7Z570 1209 aa28.34■■■□□ 2.13
ROM1-201ENST00000278833 EFCAB8A8MWE9 144 aa28.33■■■□□ 2.13
ROM1-201ENST00000278833 POLRMTO00411 1230 aaKnown RBP28.33■■■□□ 2.13
ROM1-201ENST00000278833 MFAP3LO75121 409 aa28.33■■■□□ 2.13
ROM1-201ENST00000278833 TRIM14Q14142 442 aa28.33■■■□□ 2.13
ROM1-201ENST00000278833 TOGARAM2Q6ZUX3 1019 aa28.33■■■□□ 2.13
ROM1-201ENST00000278833 CNGA4Q8IV77 575 aa28.33■■■□□ 2.13
ROM1-201ENST00000278833 IGSF22Q8N9C0 903 aa28.33■■■□□ 2.13
ROM1-201ENST00000278833 PALM3A6NDB9 673 aaPredicted RBP28.32■■■□□ 2.12
ROM1-201ENST00000278833 TEX33O43247 280 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 MCM7P33993 719 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 PPFIBP1Q86W92 1011 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 SH3RF3Q8TEJ3 882 aaPredicted RBP28.32■■■□□ 2.12
ROM1-201ENST00000278833 SNED1Q8TER0 1413 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 KIFC2Q96AC6 838 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 ZNF287Q9HBT7 754 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 SPDYE4A6NLX3 237 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 CCDC175P0C221 793 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 MAP3K9P80192 1104 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 GABPB1Q06547 395 aaPredicted RBP28.32■■■□□ 2.12
ROM1-201ENST00000278833 PAK1Q13153 545 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 KCNB1Q14721 858 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 SPZ1Q9BXG8 430 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 CCSER1Q9C0I3 900 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 MAGEF1Q9HAY2 307 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 BARHL2Q9NY43 387 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.32■■■□□ 2.12
ROM1-201ENST00000278833 CTNND2Q9UQB3 1225 aa28.32■■■□□ 2.12
ROM1-201ENST00000278833 V9GYY5 206 aaPredicted RBP28.32■■■□□ 2.12
ROM1-201ENST00000278833 LRRC37AA6NMS7 1700 aa28.31■■■□□ 2.12
ROM1-201ENST00000278833 VEGFAP15692 232 aaPredicted RBP28.31■■■□□ 2.12
ROM1-201ENST00000278833 SMARCA1P28370 1054 aa28.31■■■□□ 2.12
ROM1-201ENST00000278833 CASP1P29466 404 aa28.31■■■□□ 2.12
ROM1-201ENST00000278833 PTPN21Q16825 1174 aa28.31■■■□□ 2.12
ROM1-201ENST00000278833 ERCC6LQ2NKX8 1250 aa28.31■■■□□ 2.12
ROM1-201ENST00000278833 KLHL10Q6JEL2 608 aa28.31■■■□□ 2.12
ROM1-201ENST00000278833 DISC1Q9NRI5 854 aa28.31■■■□□ 2.12
ROM1-201ENST00000278833 RTFDC1Q9BY42 306 aaPredicted RBP28.3■■■□□ 2.12
ROM1-201ENST00000278833 STXBP3O00186 592 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 ADAMTS3O15072 1205 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 RPN1P04843 607 aaKnown RBP28.29■■■□□ 2.12
ROM1-201ENST00000278833 CASQ1P31415 396 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 ORC2Q13416 577 aaPredicted RBP28.29■■■□□ 2.12
ROM1-201ENST00000278833 PCDHA6Q9UN73 950 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 PCDHA8Q9Y5H6 950 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 NOVP48745 357 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 STX17P56962 302 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 RBL2Q08999 1139 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 SLC35G1Q2M3R5 365 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 KRT222Q8N1A0 295 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 STAG2Q8N3U4 1231 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 LRRN4CLQ8ND94 238 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 MNS1Q8NEH6 495 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 CUEDC2Q9H467 287 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 MKNK2Q9HBH9 465 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 MRFAP1Q9Y605 127 aa28.29■■■□□ 2.12
ROM1-201ENST00000278833 GOLGB1Q14789 3259 aaKnown RBP28.28■■■□□ 2.12
ROM1-201ENST00000278833 CCDC194A0A1B0GVG4 234 aa28.28■■■□□ 2.12
ROM1-201ENST00000278833 SERPINB2P05120 415 aa28.28■■■□□ 2.12
ROM1-201ENST00000278833 RASA1P20936 1047 aa28.28■■■□□ 2.12
ROM1-201ENST00000278833 RRAGBQ5VZM2 374 aa28.28■■■□□ 2.12
ROM1-201ENST00000278833 WWC2Q6AWC2 1192 aa28.28■■■□□ 2.12
ROM1-201ENST00000278833 TYW1BQ6NUM6 668 aa28.28■■■□□ 2.12
ROM1-201ENST00000278833 RASGRP2Q7LDG7 609 aa28.28■■■□□ 2.12
ROM1-201ENST00000278833 ANKRD20A12PQ8NF67 263 aa28.28■■■□□ 2.12
ROM1-201ENST00000278833 ADGRG1Q9Y653 693 aa28.28■■■□□ 2.12
ROM1-201ENST00000278833 LTBP1Q14766 1721 aa28.28■■■□□ 2.12
ROM1-201ENST00000278833 URI1O94763 535 aaPredicted RBP28.27■■■□□ 2.12
ROM1-201ENST00000278833 TSPY3P0CV98 308 aa28.27■■■□□ 2.12
ROM1-201ENST00000278833 TSPY8P0CW00 308 aa28.27■■■□□ 2.12
ROM1-201ENST00000278833 KRT31Q15323 416 aa28.27■■■□□ 2.12
ROM1-201ENST00000278833 C16orf86Q6ZW13 317 aa28.27■■■□□ 2.12
ROM1-201ENST00000278833 SMYD4Q8IYR2 804 aaPredicted RBP28.27■■■□□ 2.12
ROM1-201ENST00000278833 UBXN4Q92575 508 aa28.27■■■□□ 2.12
ROM1-201ENST00000278833 BAZ2BQ9UIF8 2168 aaKnown RBP28.27■■■□□ 2.12
ROM1-201ENST00000278833 C10orf71Q711Q0 1435 aa28.27■■■□□ 2.12
ROM1-201ENST00000278833 STAT6P42226 847 aa28.27■■■□□ 2.12
ROM1-201ENST00000278833 GNG11P61952 73 aa28.27■■■□□ 2.12
ROM1-201ENST00000278833 DTHD1Q6ZMT9 781 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms