RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 NECTIN1Q15223 517 aa15.27■□□□□ 0.04
NPC1-201ENST00000269228 TAF12Q16514 161 aa15.27■□□□□ 0.04
NPC1-201ENST00000269228 XKR9Q5GH70 373 aa15.27■□□□□ 0.04
NPC1-201ENST00000269228 CYP2D6P10635 497 aa15.27■□□□□ 0.04
NPC1-201ENST00000269228 CCDC122Q5T0U0 273 aa15.27■□□□□ 0.04
NPC1-201ENST00000269228 FAM102BQ5T8I3 360 aa15.27■□□□□ 0.04
NPC1-201ENST00000269228 PODNQ7Z5L7 613 aa15.27■□□□□ 0.04
NPC1-201ENST00000269228 FMNL3Q8IVF7 1028 aa15.27■□□□□ 0.04
NPC1-201ENST00000269228 TEKT3Q9BXF9 490 aa15.27■□□□□ 0.04
NPC1-201ENST00000269228 TNFAIP3P21580 790 aa15.27■□□□□ 0.03
NPC1-201ENST00000269228 CMA1P23946 247 aa15.27■□□□□ 0.03
NPC1-201ENST00000269228 KCTD2Q14681 263 aa15.27■□□□□ 0.03
NPC1-201ENST00000269228 FOXP4Q8IVH2 680 aaPredicted RBP15.27■□□□□ 0.03
NPC1-201ENST00000269228 SPC25Q9HBM1 224 aa15.27■□□□□ 0.03
NPC1-201ENST00000269228 FAM47CQ5HY64 1035 aa15.27■□□□□ 0.03
NPC1-201ENST00000269228 COA7Q96BR5 231 aa15.27■□□□□ 0.03
NPC1-201ENST00000269228 PGBD1Q96JS3 809 aa15.27■□□□□ 0.03
NPC1-201ENST00000269228 SRRTQ9BXP5 876 aaKnown RBP15.27■□□□□ 0.03
NPC1-201ENST00000269228 TDRD3Q9H7E2 651 aaKnown RBP15.27■□□□□ 0.03
NPC1-201ENST00000269228 CNGA1P29973 690 aa15.26■□□□□ 0.03
NPC1-201ENST00000269228 GPSM2P81274 684 aa15.26■□□□□ 0.03
NPC1-201ENST00000269228 KIAA1468Q9P260 1216 aa15.26■□□□□ 0.03
NPC1-201ENST00000269228 STX10O60499 249 aa15.26■□□□□ 0.03
NPC1-201ENST00000269228 DEPTORQ8TB45 409 aa15.26■□□□□ 0.03
NPC1-201ENST00000269228 KIFAP3Q92845 792 aa15.26■□□□□ 0.03
NPC1-201ENST00000269228 ZNF277Q9NRM2 450 aaPredicted RBP15.26■□□□□ 0.03
NPC1-201ENST00000269228 PCDHA4Q9UN74 947 aa15.26■□□□□ 0.03
NPC1-201ENST00000269228 PREX1Q8TCU6 1659 aa15.26■□□□□ 0.03
NPC1-201ENST00000269228 TBC1D10BQ4KMP7 808 aaPredicted RBP15.26■□□□□ 0.03
NPC1-201ENST00000269228 BRIP1Q9BX63 1249 aa15.26■□□□□ 0.03
NPC1-201ENST00000269228 RTEL1Q9NZ71 1219 aa15.26■□□□□ 0.03
NPC1-201ENST00000269228 ATP6V0A2Q9Y487 856 aa15.26■□□□□ 0.03
NPC1-201ENST00000269228 PCDHB13Q9Y5F0 798 aa15.26■□□□□ 0.03
NPC1-201ENST00000269228 M0QZ92 97 aa15.26■□□□□ 0.03
NPC1-201ENST00000269228 VWA3BQ502W6 1294 aa15.26■□□□□ 0.03
NPC1-201ENST00000269228 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.26■□□□□ 0.03
NPC1-201ENST00000269228 PPP1R9BQ96SB3 815 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 ZHX1Q9UKY1 873 aaPredicted RBP15.25■□□□□ 0.03
NPC1-201ENST00000269228 SPATA31A5Q5VU36 1347 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 SPATA31A7Q8IWB4 1347 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 TRIM14Q14142 442 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 ZNF827Q17R98 1081 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 KRT26Q7Z3Y9 468 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 PRIMPOLQ96LW4 560 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 STAT2P52630 851 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 KIF22Q14807 665 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 UTP14CQ5TAP6 766 aaKnown RBP15.25■□□□□ 0.03
NPC1-201ENST00000269228 SYT10Q6XYQ8 523 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 ARMC9Q7Z3E5 817 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 SYMPKQ92797 1274 aaKnown RBP15.25■□□□□ 0.03
NPC1-201ENST00000269228 FOXP1Q9H334 677 aaPredicted RBP15.25■□□□□ 0.03
NPC1-201ENST00000269228 SUGCTQ9HAC7 445 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 POLR3GO15318 223 aaPredicted RBP15.25■□□□□ 0.03
NPC1-201ENST00000269228 KRT19P08727 400 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 IFNAR1P17181 557 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 GSTA5Q7RTV2 222 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 LINC00116Q8NCU8 138 aa15.25■□□□□ 0.03
NPC1-201ENST00000269228 FRMPD1Q5SYB0 1578 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 PSDA5PKW4 1024 aaPredicted RBP15.24■□□□□ 0.03
NPC1-201ENST00000269228 CHRNA5P30532 468 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 ZNF75DP51815 510 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 ZNF445P59923 1031 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 DPP9Q86TI2 863 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 FSD2A1L4K1 749 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 LARGE1O95461 756 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 LIFRP42702 1097 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 BARGINQ6ZT62 677 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 GH2P01242 217 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 KRT9P35527 623 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 CYP2J2P51589 502 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 NR5A1Q13285 461 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 ASIC2Q16515 512 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 CTR9Q6PD62 1173 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 MYOCDQ8IZQ8 938 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 NDUFA8P51970 172 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 SYDE2Q5VT97 1194 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 KRBA2Q6ZNG9 492 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 CCDC91Q7Z6B0 441 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.24■□□□□ 0.03
NPC1-201ENST00000269228 CCDC97Q96F63 343 aaPredicted RBP15.24■□□□□ 0.03
NPC1-201ENST00000269228 COMMD10Q9Y6G5 202 aa15.24■□□□□ 0.03
NPC1-201ENST00000269228 CALRP27797 417 aaKnown RBP15.23■□□□□ 0.03
NPC1-201ENST00000269228 CCNA1P78396 465 aa15.23■□□□□ 0.03
NPC1-201ENST00000269228 MKRN3Q13064 507 aaKnown RBP15.23■□□□□ 0.03
NPC1-201ENST00000269228 RC3H1Q5TC82 1133 aaKnown RBP15.23■□□□□ 0.03
NPC1-201ENST00000269228 FAM84BQ96KN1 310 aaPredicted RBP15.23■□□□□ 0.03
NPC1-201ENST00000269228 LONP1P36776 959 aaKnown RBP15.23■□□□□ 0.03
NPC1-201ENST00000269228 INCENPQ9NQS7 918 aa15.23■□□□□ 0.03
NPC1-201ENST00000269228 KCNG1Q9UIX4 513 aa15.23■□□□□ 0.03
NPC1-201ENST00000269228 RASAL2Q9UJF2 1139 aa15.23■□□□□ 0.03
NPC1-201ENST00000269228 PLEKHG2Q9H7P9 1386 aa15.23■□□□□ 0.03
NPC1-201ENST00000269228 FAM196BA6NMK8 535 aa15.23■□□□□ 0.03
NPC1-201ENST00000269228 TNNI1P19237 187 aa15.23■□□□□ 0.03
NPC1-201ENST00000269228 PPM1FP49593 454 aaPredicted RBP15.23■□□□□ 0.03
NPC1-201ENST00000269228 LRCH2Q5VUJ6 765 aa15.23■□□□□ 0.03
NPC1-201ENST00000269228 TBCKQ8TEA7 893 aa15.23■□□□□ 0.03
NPC1-201ENST00000269228 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.23■□□□□ 0.03
NPC1-201ENST00000269228 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.23■□□□□ 0.031e-6■■■□□ 17.2
NPC1-201ENST00000269228 V9GYY5 206 aaPredicted RBP15.23■□□□□ 0.03
NPC1-201ENST00000269228 RPAP1Q9BWH6 1393 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms