RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 USP17L21D6R901 530 aa19.2■□□□□ 0.66
SPG7-201ENST00000268704 MYO1CO00159 1063 aa19.2■□□□□ 0.66
SPG7-201ENST00000268704 BMP15O95972 392 aa19.2■□□□□ 0.66
SPG7-201ENST00000268704 PARP1P09874 1014 aaKnown RBP19.2■□□□□ 0.66
SPG7-201ENST00000268704 GSPT2Q8IYD1 628 aaKnown RBP19.2■□□□□ 0.66
SPG7-201ENST00000268704 MMS19Q96T76 1030 aa19.2■□□□□ 0.66
SPG7-201ENST00000268704 FAM205AQ6ZU69 1335 aa19.2■□□□□ 0.66
SPG7-201ENST00000268704 HERVK_113P62684 666 aa19.19■□□□□ 0.66
SPG7-201ENST00000268704 GPKOWQ92917 476 aaPredicted RBP eCLIP19.19■□□□□ 0.66
SPG7-201ENST00000268704 IL6STP40189 918 aaPredicted RBP19.19■□□□□ 0.66
SPG7-201ENST00000268704 CTR9Q6PD62 1173 aa19.19■□□□□ 0.66
SPG7-201ENST00000268704 RBM28Q9NW13 759 aaKnown RBP19.19■□□□□ 0.66
SPG7-201ENST00000268704 SLAIN2Q9P270 581 aa19.19■□□□□ 0.66
SPG7-201ENST00000268704 KLK7P49862 253 aa19.19■□□□□ 0.66
SPG7-201ENST00000268704 CCDC152Q4G0S7 254 aa19.19■□□□□ 0.66
SPG7-201ENST00000268704 WDR59Q6PJI9 974 aa19.19■□□□□ 0.66
SPG7-201ENST00000268704 ANKRD20A12PQ8NF67 263 aa19.19■□□□□ 0.66
SPG7-201ENST00000268704 BTG4Q9NY30 223 aa19.19■□□□□ 0.66
SPG7-201ENST00000268704 CYP2D6P10635 497 aa19.18■□□□□ 0.66
SPG7-201ENST00000268704 STAT6P42226 847 aa19.18■□□□□ 0.66
SPG7-201ENST00000268704 PPP2R5BQ15173 497 aa19.18■□□□□ 0.66
SPG7-201ENST00000268704 LEKR1Q6ZMV7 388 aa19.18■□□□□ 0.66
SPG7-201ENST00000268704 RIN2Q8WYP3 895 aaPredicted RBP19.18■□□□□ 0.66
SPG7-201ENST00000268704 CACNA1SQ13698 1873 aa19.18■□□□□ 0.66
SPG7-201ENST00000268704 SCG2P13521 617 aa19.18■□□□□ 0.66
SPG7-201ENST00000268704 SPAG1Q07617 926 aa19.18■□□□□ 0.66
SPG7-201ENST00000268704 TUBB2AQ13885 445 aa19.18■□□□□ 0.66
SPG7-201ENST00000268704 TRAPPC11Q7Z392 1133 aa19.18■□□□□ 0.66
SPG7-201ENST00000268704 CTCFLQ8NI51 663 aaPredicted RBP19.18■□□□□ 0.66
SPG7-201ENST00000268704 TUBB2BQ9BVA1 445 aa19.18■□□□□ 0.66
SPG7-201ENST00000268704 HSP90B2PQ58FF3 399 aa19.17■□□□□ 0.66
SPG7-201ENST00000268704 CCDC122Q5T0U0 273 aa19.17■□□□□ 0.66
SPG7-201ENST00000268704 MB21D1Q8N884 522 aa19.17■□□□□ 0.66
SPG7-201ENST00000268704 RASSF8Q8NHQ8 419 aa19.17■□□□□ 0.66
SPG7-201ENST00000268704 FAM204AQ9H8W3 233 aa19.17■□□□□ 0.66
SPG7-201ENST00000268704 ABCA3Q99758 1704 aa19.17■□□□□ 0.66
SPG7-201ENST00000268704 RCCD1A6NED2 376 aa19.17■□□□□ 0.66
SPG7-201ENST00000268704 ANKRD65E5RJM6 399 aa19.17■□□□□ 0.66
SPG7-201ENST00000268704 AGPAT5Q9NUQ2 364 aa19.17■□□□□ 0.66
SPG7-201ENST00000268704 MYO1AQ9UBC5 1043 aa19.17■□□□□ 0.66
SPG7-201ENST00000268704 RRP15Q9Y3B9 282 aaKnown RBP19.17■□□□□ 0.66
SPG7-201ENST00000268704 DUSP10Q9Y6W6 482 aa19.17■□□□□ 0.66
SPG7-201ENST00000268704 UBAP1LF5GYI3 381 aa19.16■□□□□ 0.66
SPG7-201ENST00000268704 ZNF185O15231 689 aa19.16■□□□□ 0.66
SPG7-201ENST00000268704 SRLQ86TD4 932 aa19.16■□□□□ 0.66
SPG7-201ENST00000268704 GPIHBP1Q8IV16 184 aa19.16■□□□□ 0.66
SPG7-201ENST00000268704 OR8K1Q8NGG5 319 aa19.16■□□□□ 0.66
SPG7-201ENST00000268704 LUC7L2Q9Y383 392 aaKnown RBP19.16■□□□□ 0.66
SPG7-201ENST00000268704 B4DLN1 442 aa19.16■□□□□ 0.66
SPG7-201ENST00000268704 TRIM14Q14142 442 aa19.16■□□□□ 0.66
SPG7-201ENST00000268704 NAALADL2Q58DX5 795 aa19.16■□□□□ 0.66
SPG7-201ENST00000268704 CCDC148Q8NFR7 591 aa19.16■□□□□ 0.66
SPG7-201ENST00000268704 LACRTQ9GZZ8 138 aa19.16■□□□□ 0.66
SPG7-201ENST00000268704 CWC15Q9P013 229 aaKnown RBP19.16■□□□□ 0.66
SPG7-201ENST00000268704 MTMR7Q9Y216 660 aa19.16■□□□□ 0.66
SPG7-201ENST00000268704 NIP7Q9Y221 180 aaKnown RBP eCLIP19.16■□□□□ 0.66
SPG7-201ENST00000268704 NKRFO15226 690 aaKnown RBP eCLIP19.16■□□□□ 0.66
SPG7-201ENST00000268704 SKIDA1Q1XH10 827 aa19.16■□□□□ 0.66
SPG7-201ENST00000268704 LRRC15Q8TF66 581 aa19.16■□□□□ 0.66
SPG7-201ENST00000268704 RSPH14Q9UHP6 348 aa19.16■□□□□ 0.66
SPG7-201ENST00000268704 DISP2A7MBM2 1401 aa19.15■□□□□ 0.66
SPG7-201ENST00000268704 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.15■□□□□ 0.66
SPG7-201ENST00000268704 C3orf67Q6ZVT6 689 aa19.15■□□□□ 0.66
SPG7-201ENST00000268704 ADSSL1Q8N142 457 aa19.15■□□□□ 0.66
SPG7-201ENST00000268704 GNL3LQ9NVN8 582 aaKnown RBP19.15■□□□□ 0.66
SPG7-201ENST00000268704 JAG2Q9Y219 1238 aa19.15■□□□□ 0.66
SPG7-201ENST00000268704 LGALS16A8MUM7 142 aa19.15■□□□□ 0.66
SPG7-201ENST00000268704 DDAH1O94760 285 aa19.15■□□□□ 0.66
SPG7-201ENST00000268704 C4orf32Q8N8J7 132 aa19.15■□□□□ 0.66
SPG7-201ENST00000268704 TRIM47Q96LD4 638 aa19.15■□□□□ 0.66
SPG7-201ENST00000268704 RNF40O75150 1001 aa19.14■□□□□ 0.66
SPG7-201ENST00000268704 MYBL2P10244 700 aa19.14■□□□□ 0.66
SPG7-201ENST00000268704 KLRK1P26718 216 aa19.14■□□□□ 0.66
SPG7-201ENST00000268704 EIF5P55010 431 aaKnown RBP19.14■□□□□ 0.66
SPG7-201ENST00000268704 TYW1BQ6NUM6 668 aa19.14■□□□□ 0.66
SPG7-201ENST00000268704 FAM71BQ8TC56 605 aa19.14■□□□□ 0.66
SPG7-201ENST00000268704 GBP3Q9H0R5 595 aa19.14■□□□□ 0.66
SPG7-201ENST00000268704 TMEM60Q9H2L4 133 aa19.14■□□□□ 0.66
SPG7-201ENST00000268704 DISC1Q9NRI5 854 aa19.14■□□□□ 0.66
SPG7-201ENST00000268704 PSMD14O00487 310 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 TOM1O60784 492 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 CALM1P0DP23 149 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 CALM2P0DP24 149 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 CALM3P0DP25 149 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 USP14P54578 494 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 CYP27A1Q02318 531 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 PFKFB3Q16875 520 aaPredicted RBP19.14■□□□□ 0.65
SPG7-201ENST00000268704 WDR93Q6P2C0 686 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 KIAA1328Q86T90 577 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 DNAJC7Q99615 494 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 RASSF4Q9H2L5 321 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 RMND1Q9NWS8 449 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 SAR1BQ9Y6B6 198 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 ZNF804BA4D1E1 1349 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 SYF2O95926 243 aaKnown RBP19.14■□□□□ 0.65
SPG7-201ENST00000268704 INTS5Q6P9B9 1019 aaKnown RBP19.14■□□□□ 0.65
SPG7-201ENST00000268704 ZNF507Q8TCN5 953 aa19.14■□□□□ 0.65
SPG7-201ENST00000268704 H7C1D1 291 aa19.13■□□□□ 0.65
SPG7-201ENST00000268704 NTSR2O95665 410 aa19.13■□□□□ 0.65
SPG7-201ENST00000268704 BRIP1Q9BX63 1249 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms