RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 ADD2P35612 726 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 PEX26Q7Z412 305 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 FAM207AQ9NSI2 230 aaPredicted RBP20.96■□□□□ 0.95
PTPRE-201ENST00000254667 HAUS2Q9NVX0 235 aa20.96■□□□□ 0.95
PTPRE-201ENST00000254667 CCDC94Q9BW85 323 aaPredicted RBP20.95■□□□□ 0.94
PTPRE-201ENST00000254667 FEZ2Q9UHY8 353 aaPredicted RBP20.95■□□□□ 0.94
PTPRE-201ENST00000254667 TMEM232C9JQI7 657 aa20.95■□□□□ 0.94
PTPRE-201ENST00000254667 DCPSQ96C86 337 aaKnown RBP20.95■□□□□ 0.94
PTPRE-201ENST00000254667 SLF1Q9BQI6 1058 aa20.95■□□□□ 0.94
PTPRE-201ENST00000254667 ARMCX3Q9UH62 379 aaPredicted RBP20.95■□□□□ 0.94
PTPRE-201ENST00000254667 SCRN1Q12765 414 aa20.95■□□□□ 0.94
PTPRE-201ENST00000254667 FAM102BQ5T8I3 360 aa20.95■□□□□ 0.94
PTPRE-201ENST00000254667 PLA2G4DQ86XP0 818 aa20.95■□□□□ 0.94
PTPRE-201ENST00000254667 SULF1Q8IWU6 871 aa20.95■□□□□ 0.94
PTPRE-201ENST00000254667 PANK4Q9NVE7 773 aa20.95■□□□□ 0.94
PTPRE-201ENST00000254667 RTEL1Q9NZ71 1219 aa20.95■□□□□ 0.94
PTPRE-201ENST00000254667 PCDHA7Q9UN72 937 aa20.95■□□□□ 0.94
PTPRE-201ENST00000254667 PCDHA1Q9Y5I3 950 aa20.95■□□□□ 0.94
PTPRE-201ENST00000254667 ABCC3O15438 1527 aa20.95■□□□□ 0.94
PTPRE-201ENST00000254667 GOLGA8HP0CJ92 632 aa20.94■□□□□ 0.94
PTPRE-201ENST00000254667 EAPPQ56P03 285 aaPredicted RBP20.94■□□□□ 0.94
PTPRE-201ENST00000254667 CCDC125Q86Z20 511 aa20.94■□□□□ 0.94
PTPRE-201ENST00000254667 IPO4Q8TEX9 1081 aaKnown RBP20.94■□□□□ 0.94
PTPRE-201ENST00000254667 LSM14BQ9BX40 385 aaKnown RBP20.94■□□□□ 0.94
PTPRE-201ENST00000254667 CARD6Q9BX69 1037 aa20.94■□□□□ 0.94
PTPRE-201ENST00000254667 GPKOWQ92917 476 aaPredicted RBP eCLIP20.94■□□□□ 0.94
PTPRE-201ENST00000254667 PAK2Q13177 524 aa20.94■□□□□ 0.94
PTPRE-201ENST00000254667 RUFY4Q6ZNE9 571 aa20.94■□□□□ 0.94
PTPRE-201ENST00000254667 PAGR1Q9BTK6 254 aa20.94■□□□□ 0.94
PTPRE-201ENST00000254667 ARHGAP31Q2M1Z3 1444 aa20.94■□□□□ 0.94
PTPRE-201ENST00000254667 NR1I2O75469 434 aa20.94■□□□□ 0.94
PTPRE-201ENST00000254667 ASIC3Q9UHC3 531 aa20.94■□□□□ 0.94
PTPRE-201ENST00000254667 TET3O43151 1660 aa20.94■□□□□ 0.94
PTPRE-201ENST00000254667 ADGRL3Q9HAR2 1447 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 FMNL1O95466 1100 aaPredicted RBP20.93■□□□□ 0.94
PTPRE-201ENST00000254667 XKR9Q5GH70 373 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 TRPC6Q9Y210 931 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 APOA5Q6Q788 366 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 UIMC1Q96RL1 719 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 TLR7Q9NYK1 1049 aaKnown RBP20.93■□□□□ 0.94
PTPRE-201ENST00000254667 ODF2LQ9ULJ1 636 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 TTLL1O95922 423 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 LIG4P49917 911 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 FAM178BQ8IXR5 827 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 SLC17A8Q8NDX2 589 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 BEGAINQ9BUH8 593 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 PPP6R2O75170 966 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 RASA3Q14644 834 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 ERFEQ4G0M1 354 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 TYW1BQ6NUM6 668 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 GBP6Q6ZN66 633 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 ANKRD35Q8N283 1001 aa20.93■□□□□ 0.94
PTPRE-201ENST00000254667 CPSF1Q10570 1443 aaKnown RBP20.93■□□□□ 0.94
PTPRE-201ENST00000254667 MNAT1P51948 309 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 ARHGAP44Q17R89 818 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 DNAJC21Q5F1R6 531 aaKnown RBP20.92■□□□□ 0.94
PTPRE-201ENST00000254667 SPATA24Q86W54 205 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 NLRC4Q9NPP4 1024 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 CCPG1Q9ULG6 757 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 KDM6BO15054 1643 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 CYP21A2P08686 494 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 CYP2J2P51589 502 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 PTGDRQ13258 359 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 AK8Q96MA6 479 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 ADCY10Q96PN6 1610 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 RPN1P04843 607 aaKnown RBP20.92■□□□□ 0.94
PTPRE-201ENST00000254667 MTMR3Q13615 1198 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 SPATA1Q5VX52 437 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 DAAM2Q86T65 1068 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 TRIM58Q8NG06 486 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 NRBP2Q9NSY0 501 aa20.92■□□□□ 0.94
PTPRE-201ENST00000254667 USP14P54578 494 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 UAP1Q16222 522 aaPredicted RBP20.91■□□□□ 0.94
PTPRE-201ENST00000254667 CC2D2BQ6DHV5 1058 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 DHX36Q9H2U1 1008 aaKnown RBP20.91■□□□□ 0.94
PTPRE-201ENST00000254667 USTQ9Y2C2 406 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 K7ENM7 598 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 FAM26FQ5R3K3 315 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 PPP1R21Q6ZMI0 780 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 KANSL2Q9H9L4 492 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 AMFRQ9UKV5 643 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 PCDHA4Q9UN74 947 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 PLA2R1Q13018 1463 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 TAOK1Q7L7X3 1001 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 AFAP1L1Q8TED9 768 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 NSMCE1Q8WV22 266 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 ANAPC4Q9UJX5 808 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 MAP3K4Q9Y6R4 1608 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 GCFC2P16383 781 aaKnown RBP20.91■□□□□ 0.94
PTPRE-201ENST00000254667 RNASE9P60153 205 aaKnown RBP20.91■□□□□ 0.94
PTPRE-201ENST00000254667 SLC39A14Q15043 492 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 PPP2R5EQ16537 467 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 PARP2Q9UGN5 583 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 LGSNQ5TDP6 509 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 ADPGKQ9BRR6 497 aa20.91■□□□□ 0.94
PTPRE-201ENST00000254667 RPAP1Q9BWH6 1393 aaPredicted RBP20.9■□□□□ 0.94
PTPRE-201ENST00000254667 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.9■□□□□ 0.94
PTPRE-201ENST00000254667 MIS12Q9H081 205 aa20.9■□□□□ 0.94
PTPRE-201ENST00000254667 STIM2Q9P246 746 aa20.9■□□□□ 0.94
PTPRE-201ENST00000254667 M0R2C6 588 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms