RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 TTC6Q86TZ1 520 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 MICU3Q86XE3 530 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 RAB11FIP4Q86YS3 637 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 FBXL16Q8N461 479 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 DDX11Q96FC9 970 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 MTA3Q9BTC8 594 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 ZFAND3Q9H8U3 227 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 NCOA5Q9HCD5 579 aaKnown RBP11.37□□□□□ -0.59
TTC1-201ENST00000231238 TMOD2Q9NZR1 351 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 ZNRF3Q9ULT6 936 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 ATP6V1DQ9Y5K8 247 aa11.37□□□□□ -0.59
TTC1-201ENST00000231238 MYH2Q9UKX2 1941 aa11.36□□□□□ -0.59
TTC1-201ENST00000231238 FLT1P17948 1338 aa11.36□□□□□ -0.59
TTC1-201ENST00000231238 BMP1P13497 986 aa11.36□□□□□ -0.59
TTC1-201ENST00000231238 SYT1P21579 422 aa11.36□□□□□ -0.59
TTC1-201ENST00000231238 MCM4P33991 863 aa11.36□□□□□ -0.59
TTC1-201ENST00000231238 LIFRP42702 1097 aa11.36□□□□□ -0.59
TTC1-201ENST00000231238 NT5C2P49902 561 aa11.36□□□□□ -0.59
TTC1-201ENST00000231238 HDLBPQ00341 1268 aaKnown RBP11.36□□□□□ -0.59
TTC1-201ENST00000231238 PKP1Q13835 747 aa11.36□□□□□ -0.59
TTC1-201ENST00000231238 IFIT1BQ5T764 474 aaKnown RBP11.36□□□□□ -0.59
TTC1-201ENST00000231238 CATIPQ7Z7H3 387 aa11.36□□□□□ -0.59
TTC1-201ENST00000231238 ZSCAN29Q8IWY8 852 aaPredicted RBP11.36□□□□□ -0.59
TTC1-201ENST00000231238 NUP133Q8WUM0 1156 aa11.36□□□□□ -0.59
TTC1-201ENST00000231238 ZSCAN10Q96SZ4 725 aaPredicted RBP11.36□□□□□ -0.59
TTC1-201ENST00000231238 BRPF3Q9ULD4 1205 aa11.36□□□□□ -0.59
TTC1-201ENST00000231238 TNKSO95271 1327 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 TIAM2Q8IVF5 1701 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 PTPDC1A2A3K4 754 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 ORC4O43929 436 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 DTNBO60941 627 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 ZIC2O95409 532 aaPredicted RBP11.35□□□□□ -0.59
TTC1-201ENST00000231238 TSPY3P0CV98 308 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 TSPY8P0CW00 308 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 RHBDL3P58872 404 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 CCDC178Q5BJE1 867 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 FAM47AQ5JRC9 791 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 MCTP1Q6DN14 999 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 APOA5Q6Q788 366 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 CCDC144CPQ8IYA2 1237 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 ZDHHC15Q96MV8 337 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 LY9Q9HBG7 655 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 SERPINA10Q9UK55 444 aa11.35□□□□□ -0.59
TTC1-201ENST00000231238 KIF13BQ9NQT8 1826 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 YDJCA8MPS7 323 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 PSMD14O00487 310 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 JAK2O60674 1132 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 BRD1O95696 1058 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 ZSCAN22P10073 491 aaPredicted RBP11.34□□□□□ -0.59
TTC1-201ENST00000231238 NCLP19338 710 aaKnown RBP11.34□□□□□ -0.59
TTC1-201ENST00000231238 RXRAP19793 462 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 TFAP4Q01664 338 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 ST3GAL1Q11201 340 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 MCM6Q14566 821 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 TNIP1Q15025 636 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 DLGAP5Q15398 846 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 FOXD4L6Q3SYB3 417 aaPredicted RBP11.34□□□□□ -0.59
TTC1-201ENST00000231238 CFAP100Q494V2 611 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 CDC42EP5Q6NZY7 148 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 FOXD4L3Q6VB84 417 aaPredicted RBP11.34□□□□□ -0.59
TTC1-201ENST00000231238 CRACR2BQ8N4Y2 399 aaPredicted RBP11.34□□□□□ -0.59
TTC1-201ENST00000231238 IGDCC4Q8TDY8 1250 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 DYNLL2Q96FJ2 89 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 MRIQ9BWK5 157 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 CDV3Q9UKY7 258 aaKnown RBP11.34□□□□□ -0.59
TTC1-201ENST00000231238 KIAA1551Q9HCM1 1747 aa11.34□□□□□ -0.59
TTC1-201ENST00000231238 BAZ2AQ9UIF9 1905 aaKnown RBP11.34□□□□□ -0.59
TTC1-201ENST00000231238 BAG4O95429 457 aaKnown RBP11.33□□□□□ -0.6
TTC1-201ENST00000231238 EIF6P56537 245 aaKnown RBP11.33□□□□□ -0.6
TTC1-201ENST00000231238 EVCP57679 992 aa11.33□□□□□ -0.6
TTC1-201ENST00000231238 AKAP17AQ02040 695 aaKnown RBP11.33□□□□□ -0.6
TTC1-201ENST00000231238 RTN1Q16799 776 aa11.33□□□□□ -0.6
TTC1-201ENST00000231238 CIAPIN1Q6FI81 312 aa11.33□□□□□ -0.6
TTC1-201ENST00000231238 SGMS1Q86VZ5 419 aa11.33□□□□□ -0.6
TTC1-201ENST00000231238 CCDC116Q8IYX3 515 aa11.33□□□□□ -0.6
TTC1-201ENST00000231238 NSUN7Q8NE18 718 aaKnown RBP11.33□□□□□ -0.6
TTC1-201ENST00000231238 MYL10Q9BUA6 226 aa11.33□□□□□ -0.6
TTC1-201ENST00000231238 KAT14Q9H8E8 782 aa11.33□□□□□ -0.6
TTC1-201ENST00000231238 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.33□□□□□ -0.6
TTC1-201ENST00000231238 TACC3Q9Y6A5 838 aa11.33□□□□□ -0.6
TTC1-201ENST00000231238 SNED1Q8TER0 1413 aa11.33□□□□□ -0.6
TTC1-201ENST00000231238 CHD4Q14839 1912 aa11.33□□□□□ -0.6
TTC1-201ENST00000231238 SMIM22K7EJ46 135 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 MYO1BO43795 1136 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 PPFIA3O75145 1194 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 VIL1P09327 827 aaKnown RBP11.32□□□□□ -0.6
TTC1-201ENST00000231238 CALM1P0DP23 149 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 CALM2P0DP24 149 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 CALM3P0DP25 149 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 PLCD1P51178 756 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 TCP10Q12799 353 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 TRIM29Q14134 588 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 INTS6LQ5JSJ4 861 aaKnown RBP11.32□□□□□ -0.6
TTC1-201ENST00000231238 APOBEC3HQ6NTF7 200 aaKnown RBP11.32□□□□□ -0.6
TTC1-201ENST00000231238 TRIM22Q8IYM9 498 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 ZNF654Q8IZM8 581 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 NLGN2Q8NFZ4 835 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 OSBPL5Q9H0X9 879 aaPredicted RBP11.32□□□□□ -0.6
TTC1-201ENST00000231238 ORC3Q9UBD5 711 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms