RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CYP26C1Q6V0L0 522 aa19.49■□□□□ 0.71
USB1-201ENST00000219281 PNKPQ96T60 521 aa19.49■□□□□ 0.71
USB1-201ENST00000219281 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.49■□□□□ 0.71
USB1-201ENST00000219281 ONECUT3O60422 494 aaPredicted RBP19.48■□□□□ 0.71
USB1-201ENST00000219281 KLRK1P26718 216 aa19.48■□□□□ 0.71
USB1-201ENST00000219281 TM4SF1P30408 202 aa19.48■□□□□ 0.71
USB1-201ENST00000219281 TRAPPC10P48553 1259 aa19.48■□□□□ 0.71
USB1-201ENST00000219281 HNRNPH2P55795 449 aaKnown RBP19.48■□□□□ 0.71
USB1-201ENST00000219281 ANKRD20A12PQ8NF67 263 aa19.48■□□□□ 0.71
USB1-201ENST00000219281 PYM1Q9BRP8 204 aaKnown RBP19.48■□□□□ 0.71
USB1-201ENST00000219281 GDAQ9Y2T3 454 aa19.48■□□□□ 0.71
USB1-201ENST00000219281 BAZ2AQ9UIF9 1905 aaKnown RBP19.48■□□□□ 0.71
USB1-201ENST00000219281 CACNA1SQ13698 1873 aa19.48■□□□□ 0.71
USB1-201ENST00000219281 MAP2K7O14733 419 aa19.48■□□□□ 0.71
USB1-201ENST00000219281 ARHGAP25P42331 645 aa19.48■□□□□ 0.71
USB1-201ENST00000219281 GYS2P54840 703 aa19.48■□□□□ 0.71
USB1-201ENST00000219281 TUBB2AQ13885 445 aa19.48■□□□□ 0.71
USB1-201ENST00000219281 PFKFB3Q16875 520 aaPredicted RBP19.48■□□□□ 0.71
USB1-201ENST00000219281 TPTE2Q6XPS3 522 aa19.48■□□□□ 0.71
USB1-201ENST00000219281 NAPGQ99747 312 aaPredicted RBP19.48■□□□□ 0.71
USB1-201ENST00000219281 SLF1Q9BQI6 1058 aa19.48■□□□□ 0.71
USB1-201ENST00000219281 TUBB2BQ9BVA1 445 aa19.48■□□□□ 0.71
USB1-201ENST00000219281 NHSQ6T4R5 1651 aa19.47■□□□□ 0.71
USB1-201ENST00000219281 H3BQF6 201 aa19.47■□□□□ 0.71
USB1-201ENST00000219281 KRT9P35527 623 aa19.47■□□□□ 0.71
USB1-201ENST00000219281 PRCPP42785 496 aa19.47■□□□□ 0.71
USB1-201ENST00000219281 POTEB2H3BUK9 544 aa19.46■□□□□ 0.71
USB1-201ENST00000219281 ORC4O43929 436 aa19.46■□□□□ 0.71
USB1-201ENST00000219281 CYP2D6P10635 497 aa19.46■□□□□ 0.71
USB1-201ENST00000219281 UBXN1Q04323 297 aa19.46■□□□□ 0.71
USB1-201ENST00000219281 BEND6Q5SZJ8 279 aaPredicted RBP19.46■□□□□ 0.71
USB1-201ENST00000219281 FBXO33Q7Z6M2 555 aa19.46■□□□□ 0.71
USB1-201ENST00000219281 MSANTD4Q8NCY6 345 aa19.46■□□□□ 0.71
USB1-201ENST00000219281 HNRNPLLQ8WVV9 542 aaKnown RBP19.46■□□□□ 0.71
USB1-201ENST00000219281 NSUN4Q96CB9 384 aaKnown RBP19.46■□□□□ 0.71
USB1-201ENST00000219281 RMND1Q9NWS8 449 aa19.46■□□□□ 0.71
USB1-201ENST00000219281 RHOXF2BP0C7M4 288 aa19.46■□□□□ 0.71
USB1-201ENST00000219281 TRIM14Q14142 442 aa19.46■□□□□ 0.71
USB1-201ENST00000219281 RHOXF2Q9BQY4 288 aa19.46■□□□□ 0.71
USB1-201ENST00000219281 DCP1AQ9NPI6 582 aaPredicted RBP19.46■□□□□ 0.71
USB1-201ENST00000219281 LRRC4BQ9NT99 713 aa19.46■□□□□ 0.71
USB1-201ENST00000219281 RAB21Q9UL25 225 aa19.46■□□□□ 0.71
USB1-201ENST00000219281 LONP1P36776 959 aaKnown RBP19.45■□□□□ 0.7
USB1-201ENST00000219281 MECOMQ03112 1051 aa19.45■□□□□ 0.7
USB1-201ENST00000219281 MCM6Q14566 821 aa19.45■□□□□ 0.7
USB1-201ENST00000219281 TXLNBQ8N3L3 684 aa19.45■□□□□ 0.7
USB1-201ENST00000219281 C4orf32Q8N8J7 132 aa19.45■□□□□ 0.7
USB1-201ENST00000219281 ZBTB9Q96C00 473 aa19.45■□□□□ 0.7
USB1-201ENST00000219281 CHP1Q99653 195 aa19.45■□□□□ 0.7
USB1-201ENST00000219281 AFF2P51816 1311 aa19.45■□□□□ 0.7
USB1-201ENST00000219281 CASZ1Q86V15 1759 aa19.45■□□□□ 0.7
USB1-201ENST00000219281 TRIM49BA6NDI0 452 aa19.45■□□□□ 0.7
USB1-201ENST00000219281 STAT6P42226 847 aa19.45■□□□□ 0.7
USB1-201ENST00000219281 USP5P45974 858 aa19.45■□□□□ 0.7
USB1-201ENST00000219281 ABCB6Q9NP58 842 aa19.45■□□□□ 0.7
USB1-201ENST00000219281 CTAGE15A4D2H0 777 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 TSPY2A6NKD2 308 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 CTAGE8P0CG41 777 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 GPS2Q13227 327 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 SLC4A8Q2Y0W8 1093 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 MEX3CQ5U5Q3 659 aaKnown RBP19.44■□□□□ 0.7
USB1-201ENST00000219281 ARL6IP4Q66PJ3 421 aaKnown RBP19.44■□□□□ 0.7
USB1-201ENST00000219281 WWC2Q6AWC2 1192 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 FAM196AQ6ZSG2 479 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 CTAGE6Q86UF2 777 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 CTAGE4Q8IX94 777 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 SEPT12Q8IYM1 358 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 BLIDQ8IZY5 108 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 RASGRP4Q8TDF6 673 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 CRNKL1Q9BZJ0 848 aaKnown RBP19.44■□□□□ 0.7
USB1-201ENST00000219281 FAM205AQ6ZU69 1335 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 A0A1B0GUL6 1792 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 ERLIN1O75477 346 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 PARP1P09874 1014 aaKnown RBP19.44■□□□□ 0.7
USB1-201ENST00000219281 HSPA1LP34931 641 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 WHAMMP3Q1A5X7 153 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 HDXQ7Z353 690 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 IRF2BP1Q8IU81 584 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 GPKOWQ92917 476 aaPredicted RBP eCLIP19.44■□□□□ 0.7
USB1-201ENST00000219281 SUGCTQ9HAC7 445 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 PDE11AQ9HCR9 933 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 MYO1AQ9UBC5 1043 aa19.44■□□□□ 0.7
USB1-201ENST00000219281 BAZ2BQ9UIF8 2168 aaKnown RBP19.43■□□□□ 0.7
USB1-201ENST00000219281 H7C1D1 291 aa19.43■□□□□ 0.7
USB1-201ENST00000219281 TUBB4BP68371 445 aa19.43■□□□□ 0.7
USB1-201ENST00000219281 TRAPPC3LQ5T215 181 aa19.43■□□□□ 0.7
USB1-201ENST00000219281 SLC51AQ86UW1 340 aa19.43■□□□□ 0.7
USB1-201ENST00000219281 TRIM10Q9UDY6 481 aa19.43■□□□□ 0.7
USB1-201ENST00000219281 EPN1Q9Y6I3 576 aaPredicted RBP19.43■□□□□ 0.7
USB1-201ENST00000219281 DLEC1Q9Y238 1755 aa19.43■□□□□ 0.7
USB1-201ENST00000219281 RFC4P35249 363 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 PMS1P54277 932 aaKnown RBP19.42■□□□□ 0.7
USB1-201ENST00000219281 VSNL1P62760 191 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 ADSSL1Q8N142 457 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 DISC1Q9NRI5 854 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 TFCP2L1Q9NZI6 479 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 ADAM21Q9UKJ8 722 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 MYO6Q9UM54 1294 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 GUCA1BQ9UMX6 200 aa19.42■□□□□ 0.7
USB1-201ENST00000219281 REXO2Q9Y3B8 237 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms