RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 FAM177A1Q8N128 213 aaPredicted RBP22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 GMCL1P1Q8NEA9 526 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 GPRC5DQ9NZD1 345 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 ZBTB21Q9ULJ3 1066 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 F5H6K3 240 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 H7C1D1 291 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 RAD21O60216 631 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 SLC1A4P43007 532 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 KLRC3Q07444 240 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 SLFN13Q68D06 897 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 ADGRF4Q8IZF3 695 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 DCAF4Q8WV16 495 aa22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 DDX19AQ9NUU7 478 aaKnown RBP22.57■■□□□ 1.2
TNFRSF1A-201ENST00000162749 A0A1W2PRG0 241 aa22.56■■□□□ 1.2
TNFRSF1A-201ENST00000162749 CLCN1P35523 988 aa22.56■■□□□ 1.2
TNFRSF1A-201ENST00000162749 PDLIM2Q96JY6 352 aa22.56■■□□□ 1.2
TNFRSF1A-201ENST00000162749 TSPY26PQ9H489 355 aa22.56■■□□□ 1.2
TNFRSF1A-201ENST00000162749 JMJD4Q9H9V9 463 aa22.56■■□□□ 1.2
TNFRSF1A-201ENST00000162749 M0R2N6 131 aa22.55■■□□□ 1.2
TNFRSF1A-201ENST00000162749 SLC16A2P36021 539 aa22.55■■□□□ 1.2
TNFRSF1A-201ENST00000162749 SNW1Q13573 536 aaKnown RBP22.55■■□□□ 1.2
TNFRSF1A-201ENST00000162749 GALNT17Q6IS24 598 aa22.55■■□□□ 1.2
TNFRSF1A-201ENST00000162749 JMYQ8N9B5 988 aa22.55■■□□□ 1.2
TNFRSF1A-201ENST00000162749 FSIP1Q8NA03 581 aa22.55■■□□□ 1.2
TNFRSF1A-201ENST00000162749 DAGLBQ8NCG7 672 aa22.55■■□□□ 1.2
TNFRSF1A-201ENST00000162749 MRPS27Q92552 414 aaKnown RBP22.55■■□□□ 1.2
TNFRSF1A-201ENST00000162749 ZMYND12Q9H0C1 365 aa22.55■■□□□ 1.2
TNFRSF1A-201ENST00000162749 NUP62CLQ9H1M0 184 aa22.55■■□□□ 1.2
TNFRSF1A-201ENST00000162749 LETM1O95202 739 aaPredicted RBP22.55■■□□□ 1.2
TNFRSF1A-201ENST00000162749 CAP2P40123 477 aa22.55■■□□□ 1.2
TNFRSF1A-201ENST00000162749 NAPAP54920 295 aa22.55■■□□□ 1.2
TNFRSF1A-201ENST00000162749 ENGASEQ8NFI3 743 aa22.55■■□□□ 1.2
TNFRSF1A-201ENST00000162749 NDUFB10O96000 172 aa22.54■■□□□ 1.2
TNFRSF1A-201ENST00000162749 ATP2B1P20020 1258 aa22.54■■□□□ 1.2
TNFRSF1A-201ENST00000162749 FAM160A1Q05DH4 1040 aa22.54■■□□□ 1.2
TNFRSF1A-201ENST00000162749 CCDC73Q6ZRK6 1079 aa22.54■■□□□ 1.2
TNFRSF1A-201ENST00000162749 PIK3AP1Q6ZUJ8 805 aa22.54■■□□□ 1.2
TNFRSF1A-201ENST00000162749 RNF214Q8ND24 703 aa22.54■■□□□ 1.2
TNFRSF1A-201ENST00000162749 TRPM4Q8TD43 1214 aa22.54■■□□□ 1.2
TNFRSF1A-201ENST00000162749 CCDC12Q8WUD4 166 aaPredicted RBP22.54■■□□□ 1.2
TNFRSF1A-201ENST00000162749 DEFB129Q9H1M3 183 aa22.54■■□□□ 1.2
TNFRSF1A-201ENST00000162749 SYNPO2Q9UMS6 1093 aa22.54■■□□□ 1.2
TNFRSF1A-201ENST00000162749 WNT7AO00755 349 aa22.54■■□□□ 1.2
TNFRSF1A-201ENST00000162749 ECE1P42892 770 aa22.54■■□□□ 1.2
TNFRSF1A-201ENST00000162749 CAMK4Q16566 473 aa22.54■■□□□ 1.2
TNFRSF1A-201ENST00000162749 GMCL1Q96IK5 515 aa22.54■■□□□ 1.2
TNFRSF1A-201ENST00000162749 A0A1B0GVL5 298 aa22.53■■□□□ 1.2
TNFRSF1A-201ENST00000162749 hCG_1984214I3L0E3 225 aa22.53■■□□□ 1.2
TNFRSF1A-201ENST00000162749 ZNF713Q8N859 430 aaPredicted RBP22.53■■□□□ 1.2
TNFRSF1A-201ENST00000162749 RASGRP4Q8TDF6 673 aa22.53■■□□□ 1.2
TNFRSF1A-201ENST00000162749 MTMR8Q96EF0 704 aa22.53■■□□□ 1.2
TNFRSF1A-201ENST00000162749 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.53■■□□□ 1.2
TNFRSF1A-201ENST00000162749 NOL7Q9UMY1 257 aaKnown RBP22.53■■□□□ 1.2
TNFRSF1A-201ENST00000162749 TRIM75PA6NK02 468 aa22.53■■□□□ 1.2
TNFRSF1A-201ENST00000162749 CLSTN2Q9H4D0 955 aa22.53■■□□□ 1.2
TNFRSF1A-201ENST00000162749 ARHGEF10LQ9HCE6 1279 aa22.53■■□□□ 1.2
TNFRSF1A-201ENST00000162749 RNF181Q9P0P0 153 aa22.53■■□□□ 1.2
TNFRSF1A-201ENST00000162749 PNMA6FA0A0J9YX94 578 aa22.52■■□□□ 1.2
TNFRSF1A-201ENST00000162749 PHF20L1A8MW92 1017 aa22.52■■□□□ 1.2
TNFRSF1A-201ENST00000162749 USP17L10C9JJH3 530 aa22.52■■□□□ 1.2
TNFRSF1A-201ENST00000162749 CMA1P23946 247 aa22.52■■□□□ 1.2
TNFRSF1A-201ENST00000162749 ACER1Q8TDN7 264 aa22.52■■□□□ 1.2
TNFRSF1A-201ENST00000162749 NUP88Q99567 741 aaPredicted RBP22.52■■□□□ 1.2
TNFRSF1A-201ENST00000162749 PCDHA6Q9UN73 950 aa22.52■■□□□ 1.2
TNFRSF1A-201ENST00000162749 CEP131Q9UPN4 1083 aa22.52■■□□□ 1.2
TNFRSF1A-201ENST00000162749 TMX2Q9Y320 296 aa22.52■■□□□ 1.2
TNFRSF1A-201ENST00000162749 PCDHA8Q9Y5H6 950 aa22.52■■□□□ 1.2
TNFRSF1A-201ENST00000162749 SMCHD1A6NHR9 2005 aa22.52■■□□□ 1.2
TNFRSF1A-201ENST00000162749 EPS15P42566 896 aa22.51■■□□□ 1.19
TNFRSF1A-201ENST00000162749 TRAPPC10P48553 1259 aa22.51■■□□□ 1.19
TNFRSF1A-201ENST00000162749 NDUFA8P51970 172 aa22.51■■□□□ 1.19
TNFRSF1A-201ENST00000162749 ANGEL2Q5VTE6 544 aaKnown RBP22.51■■□□□ 1.19
TNFRSF1A-201ENST00000162749 FMR1NBQ8N0W7 255 aaPredicted RBP22.51■■□□□ 1.19
TNFRSF1A-201ENST00000162749 TNMDQ9H2S6 317 aa22.51■■□□□ 1.19
TNFRSF1A-201ENST00000162749 SMCO2A6NFE2 343 aa22.51■■□□□ 1.19
TNFRSF1A-201ENST00000162749 ZBTB5O15062 677 aa22.51■■□□□ 1.19
TNFRSF1A-201ENST00000162749 PPP1R11O60927 126 aaPredicted RBP22.51■■□□□ 1.19
TNFRSF1A-201ENST00000162749 ASNSP08243 561 aa22.51■■□□□ 1.19
TNFRSF1A-201ENST00000162749 COA7Q96BR5 231 aa22.51■■□□□ 1.19
TNFRSF1A-201ENST00000162749 CLIC6Q96NY7 704 aa22.51■■□□□ 1.19
TNFRSF1A-201ENST00000162749 ESYT2A0FGR8 921 aa22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 GNA11P29992 359 aa22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 TTC38Q5R3I4 469 aa22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 SHC4Q6S5L8 630 aa22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 RBM43Q6ZSC3 357 aaKnown RBP22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 KRI1Q8N9T8 703 aaKnown RBP22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 C6orf50Q9HD87 102 aa22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 CUTAO60888 179 aa22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 DDNO94850 711 aaPredicted RBP22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 MAP3K11Q16584 847 aa22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 SPICE1Q8N0Z3 855 aa22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 FBXO2Q9UK22 296 aaPredicted RBP22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 MRVI1Q9Y6F6 885 aa22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 MORC2Q9Y6X9 1032 aaPredicted RBP22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 DOCK1Q14185 1865 aa22.5■■□□□ 1.19
TNFRSF1A-201ENST00000162749 PTPREP23469 700 aa22.49■■□□□ 1.19
TNFRSF1A-201ENST00000162749 HIRAP54198 1017 aaPredicted RBP22.49■■□□□ 1.19
TNFRSF1A-201ENST00000162749 NBPF12Q5TAG4 269 aaPredicted RBP22.49■■□□□ 1.19
TNFRSF1A-201ENST00000162749 APOBEC3FQ8IUX4 373 aaKnown RBP22.49■■□□□ 1.19
TNFRSF1A-201ENST00000162749 FUCA2Q9BTY2 467 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms