RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 LdhaP06151 332 aaKnown RBP18.02■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Cst8P32766 142 aa18.02■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 StamP70297 548 aa18.02■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Pla2g6P97819 807 aa18.02■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Rnf20Q5DTM8 973 aa18.02■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Prdm1Q60636 856 aa18.02■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Sap130Q8BIH0 1057 aa18.02■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Osbpl2Q8BX94 484 aa18.02■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 RnpepQ8VCT3 650 aaKnown RBP18.02■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Arhgef25Q9CWR0 618 aa18.02■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Maged1Q9QYH6 775 aaKnown RBP18.02■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Tnnt3Q9QZ47 272 aa18.02■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Ugt1a5B2RT14 529 aa18.01■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Cspp1B2RX88 1205 aa18.01■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Gm15448F6PZL4 682 aa18.01■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Btbd1P58544 488 aa18.01■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Muc1Q02496 630 aa18.01■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Ttbk2Q3UVR3 1243 aa18.01■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Ddx4Q61496 702 aa18.01■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Gigyf2Q6Y7W8 1291 aaKnown RBP18.01■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Brd2Q7JJ13 798 aaKnown RBP18.01■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 BC048507Q80ZS7 89 aa18.01■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Ankrd54Q91WK7 299 aa18.01■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Znf687Q9D2D7 1237 aa18.01■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Znf704Q9ERQ3 566 aa18.01■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 ArcQ9WV31 396 aa18.01■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Slc6a20bO88575 635 aa18■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Mx1P09922 631 aa18■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Trap1aP19473 224 aa18■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 PtpreP49446 699 aa18■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Snap25P60879 206 aa18■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 ErmnQ5EBJ4 281 aa18■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Myl10Q62082 202 aa18■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Cyp2c29Q64458 490 aa18■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Mlh1Q9JK91 760 aa18■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Twf2Q9Z0P5 349 aaKnown RBP18■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Ep400Q8CHI8 3072 aaKnown RBP17.99■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Skor2A7M7C7 1008 aa17.99■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Nfx1B1AY10 1114 aaKnown RBP17.99■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Pgk2P09041 417 aa17.99■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Calr4Q3TQS0 420 aa17.99■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Peg10Q7TN75 958 aaKnown RBP17.99■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Ube2q1Q7TSS2 422 aa17.99■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Terb1Q8C0V1 768 aa17.99■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Crlf2Q8CII9 359 aa17.99■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Zcchc18Q8VD24 393 aa17.99■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 WtapQ9ER69 396 aa17.99■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Phlpp2Q8BXA7 1320 aa17.98■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Fam71e1A1L3C1 212 aa17.98■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Ppp2r3aB2RXC8 1150 aa17.98■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 CenpbP27790 599 aa17.98■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Sept4P28661 478 aa17.98■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Ptpn18Q61152 453 aa17.98■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Ccp110Q7TSH4 1004 aa17.98■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Zdhhc15Q8BGJ0 337 aa17.98■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Hsdl1Q8BTX9 330 aa17.98■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Lrrc56Q8K375 552 aa17.98■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Kdm8Q9CXT6 414 aa17.98■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Azi2Q9QYP6 405 aa17.98■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 CatspereP0DP43 985 aa17.97■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Lpar1P61793 364 aa17.97■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Lca5Q80ST9 704 aa17.97■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 9230110C19RikQ8CC70 267 aa17.97■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Mrpl11Q9CQF0 192 aaKnown RBP17.97■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Hmg20bQ9Z104 317 aa17.97■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Irgm2A0A140LIF8 407 aa17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Ankrd35E9Q9D8 996 aa17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 NfkbieO54910 364 aa17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Il13ra2O88786 383 aa17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Sec23aQ01405 765 aa17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Traf3ip1Q149C2 625 aa17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Ces3aQ63880 571 aa17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Churc1Q6DG52 112 aa17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 B4galnt3Q6L8S8 986 aa17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Ccdc158Q8CDI6 1109 aa17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Ces3bQ8VCU1 571 aa17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 NkapQ9D0F4 415 aaKnown RBP17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Serpinb3bQ9D1Q5 387 aa17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Ccdc81Q9D5W4 654 aa17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Pmfbp1Q9WVQ0 1022 aa17.96■□□□□ 0.47
Hmgb1-208ENSMUST00000139443 Dnaaf5B9EJR8 853 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 RarbP22605 482 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Esyt3Q5DTI8 891 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Zbtb7bQ64321 544 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Cdc14aQ6GQT0 603 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Gpbp1l1Q6NZP2 473 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Vps37dQ810I0 261 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Cep55Q8BT07 462 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Gpcpd1Q8C0L9 675 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Paf1Q8K2T8 535 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Gtf3c5Q8R2T8 520 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Slc12a8Q8VI23 705 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Ppp6r3Q922D4 844 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Dis3Q9CSH3 958 aaKnown RBP17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Cep72Q9D3R3 646 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Ftsj3Q9DBE9 838 aaKnown RBP17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 GraspQ9JJA9 392 aa17.95■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Myh8P13542 1937 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Anapc15-psA0A140T8L6 141 aa17.94■□□□□ 0.46
Hmgb1-208ENSMUST00000139443 Gm29094F6Q785 221 aa17.94■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms