RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 Rc3h1Q4VGL6 1130 aaKnown RBP8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ccdc148Q6P5U8 527 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ttll4Q80UG8 1193 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Necab1Q8BG18 352 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Bola3Q8CEI1 110 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Dact1Q8R4A3 778 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Myh15E9Q264 1925 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Rpusd2Q149F1 553 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 VrtnQ3SYK4 740 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Rnf40Q3U319 1001 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Cep63Q3UPP8 700 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Prpf38aQ4FK66 312 aaKnown RBP8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Jade2Q6ZQF7 829 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Cct8l1Q80YT3 562 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Als2cr12Q8BVM7 383 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Terb1Q8C0V1 768 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Kcnj14Q8JZN3 434 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Spire2Q8K1S6 718 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Vps37cQ8R105 352 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 C1qtnf12Q8R2Z0 308 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ubac1Q8VDI7 409 aa8.42□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ly75Q60767 1723 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Plch1Q4KWH5 1682 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Sned1Q70E20 1403 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Olfr247E9PVJ7 320 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Olfr819K7N727 320 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ppp1r1bQ60829 194 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Atp2b4Q6Q477 1205 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Col3a1P08121 1464 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Zc3h4Q6ZPZ3 1304 aaKnown RBP8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 A0A1Y7VML8 143 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Usp17lbE9Q9U0 468 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 LtkP08923 888 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Kif22Q3V300 660 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ccdc42Q5SV66 316 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Q66JV7 365 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Plekhg6Q8R0J1 787 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 WaslQ91YD9 501 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ndufab1Q9CR21 156 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Smco2Q9DA21 347 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Magi2Q9WVQ1 1275 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ube3aO08759 870 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Rgs9O54828 675 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Lig3P97386 1015 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Mybpc2Q5XKE0 1136 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Nek5Q7TSC3 627 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Rnf41Q8BH75 317 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Iqcb1Q8BP00 598 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Traf3ip3Q8C0G2 513 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ano2Q8CFW1 1002 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Sh2b1Q91ZM2 756 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Taf1dQ9D4V4 322 aa8.41□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Nup98Q6PFD9 1816 aaKnown RBP8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Med23Q80YQ2 1367 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Grin2dQ03391 1323 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Casp12O08736 419 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Lmnb1P14733 588 aaKnown RBP8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 EsrrbQ61539 433 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ift122Q6NWV3 1182 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Hpcal4Q8BGZ1 191 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Pus7lQ8CE46 702 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Coro7Q9D2V7 922 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Tfcp2Q9ERA0 502 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Usp21Q9QZL6 566 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Heg1E9Q7X6 1337 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Ankrd35E9Q9D8 996 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 AaasP58742 546 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Bend4P86174 541 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 HmmrQ00547 794 aaKnown RBP8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 GscQ02591 256 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Spata18Q0P557 537 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Cnnm2Q3TWN3 875 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 MycbpapQ5SUV2 932 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Best3Q6H1V1 669 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Krt39Q6IFX4 482 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Sec62Q8BU14 398 aaKnown RBP8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 LgsnQ8CIX8 563 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Tbc1d23Q8K0F1 684 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Hps3Q91VB4 1002 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Bap1Q99PU7 728 aa8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 SarnpQ9D1J3 210 aaKnown RBP8.4□□□□□ -1.06
Bdnf-203ENSMUST00000111043 Cyp26c1B2RXA7 518 aa8.4□□□□□ -1.07
Bdnf-203ENSMUST00000111043 DnttP09838 530 aa8.4□□□□□ -1.07
Bdnf-203ENSMUST00000111043 Ptpn12P35831 775 aa8.4□□□□□ -1.07
Bdnf-203ENSMUST00000111043 Zbtb39Q6PDK0 712 aa8.4□□□□□ -1.07
Bdnf-203ENSMUST00000111043 Pde5aQ8CG03 865 aa8.4□□□□□ -1.07
Bdnf-203ENSMUST00000111043 HibadhQ99L13 335 aaKnown RBP8.4□□□□□ -1.07
Bdnf-203ENSMUST00000111043 Krt82Q99M74 516 aa8.4□□□□□ -1.07
Bdnf-203ENSMUST00000111043 Sept14Q9DA97 430 aa8.4□□□□□ -1.07
Bdnf-203ENSMUST00000111043 Lztfl1Q9JHQ5 299 aa8.4□□□□□ -1.07
Bdnf-203ENSMUST00000111043 Znf638Q61464 1960 aaKnown RBP8.39□□□□□ -1.07
Bdnf-203ENSMUST00000111043 Zscan20B2KFW1 1030 aa8.39□□□□□ -1.07
Bdnf-203ENSMUST00000111043 Gm20425E9Q035 978 aaKnown RBP8.39□□□□□ -1.07
Bdnf-203ENSMUST00000111043 Copb2O55029 905 aa8.39□□□□□ -1.07
Bdnf-203ENSMUST00000111043 SrprbP47758 269 aa8.39□□□□□ -1.07
Bdnf-203ENSMUST00000111043 Gngt1Q61012 74 aa8.39□□□□□ -1.07
Bdnf-203ENSMUST00000111043 AsnsQ61024 561 aa8.39□□□□□ -1.07
Bdnf-203ENSMUST00000111043 QarsQ8BML9 775 aa8.39□□□□□ -1.07
Bdnf-203ENSMUST00000111043 Triml1Q8BVP1 470 aa8.39□□□□□ -1.07
Bdnf-203ENSMUST00000111043 Kif2bQ8C0N1 668 aa8.39□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms