RNA–Protein interactions for RNA: ENSMUST00000099937.4

Ccdc58-201, Transcript of Coiled-coil domain-containing protein 58, mousemouse

TSL 3 BASIC

Gene Ccdc58, Length 747 nt, Biotype protein coding, Subcellular localisation Axon, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58-201ENSMUST00000099937 Lpar1P61793 364 aa16.16■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Gm1587Q3UT80 123 aa16.16■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Fbxo10Q7TQF2 950 aa16.16■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Riox2Q8CD15 465 aa16.16■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Mrpl58Q8R035 206 aa16.16■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Cnot6lQ8VEG6 555 aa16.16■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 PdhbQ9D051 359 aa16.16■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Gm15448F6PZL4 682 aa16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Lipo1J3QME6 396 aa16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 LdhbP16125 334 aaKnown RBP16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Sept4P28661 478 aa16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 NcanP55066 1268 aa16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 HmgcrQ01237 887 aa16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Sec23aQ01405 765 aa16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Cdc14aQ6GQT0 603 aa16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Prmt6Q6NZB1 378 aa16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Mcph1Q7TT79 822 aa16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Fsd2Q8BZ52 692 aa16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Pus7lQ8CE46 702 aa16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Bud13Q8R149 637 aa16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Q9D2X8 372 aa16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Tmx2Q9D710 295 aaKnown RBP16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Tbx20Q9ES03 445 aa16.15■□□□□ 0.18
Ccdc58-201ENSMUST00000099937 Trdmt1O55055 415 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Hoxa7P02830 229 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Usp5P56399 858 aaKnown RBP16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Map4k1P70218 827 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Lilrb3P97484 841 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Ccdc174Q3U155 467 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Babam1Q3UI43 333 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Prdm1Q60636 856 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Ptger2Q62053 362 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Haus6Q6NV99 933 aaKnown RBP16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 DlatQ8BMF4 642 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Epha10Q8BYG9 1007 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Phtf2Q8CB19 747 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Btbd7Q8CFE5 1130 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Arhgef6Q8K4I3 771 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Atp5c1Q91VR2 298 aaKnown RBP16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Kif18aQ91WD7 886 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Prkrip1Q9CWV6 186 aaKnown RBP16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Maged1Q9QYH6 775 aaKnown RBP16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Ulk4Q3V129 1303 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Dennd4aE9Q8V6 1869 aa16.14■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Ankrd35E9Q9D8 996 aa16.13■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Pla2g6P97819 807 aa16.13■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Brd2Q7JJ13 798 aaKnown RBP16.13■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Zdhhc15Q8BGJ0 337 aa16.13■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 GlmnQ8BZM1 596 aa16.13■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Onecut3Q8K557 490 aa16.13■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Cog6Q8R3I3 657 aa16.13■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Oxnad1Q8VE38 311 aa16.13■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 GraspQ9JJA9 392 aa16.13■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Usp42B2RQC2 1324 aaKnown RBP16.13■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Adamts10P58459 1104 aa16.12■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Esyt3Q5DTI8 891 aa16.12■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Myl10Q62082 202 aa16.12■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Usp6nlQ80XC3 819 aa16.12■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Iws1Q8C1D8 766 aa16.12■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Adgrg2Q8CJ12 1009 aa16.12■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Fez1Q8K0X8 392 aa16.12■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Atl3Q91YH5 541 aa16.12■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 NfibP97863 570 aaKnown RBP16.11■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Pou2f2Q00196 463 aa16.11■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Csf2raQ00941 388 aa16.11■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Col6a1Q04857 1025 aa16.11■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Vmn1r209Q5NC97 312 aa16.11■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Stxbp3Q60770 592 aa16.11■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Spty2d1Q68FG3 682 aa16.11■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Peg10Q7TN75 958 aaKnown RBP16.11■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Taco1Q8K0Z7 294 aaKnown RBP16.11■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Zcchc14Q8VIG0 956 aa16.11■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Msgn1Q9JK54 188 aa16.11■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Mlh1Q9JK91 760 aa16.11■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Skor2A7M7C7 1008 aa16.1■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Nfx1B1AY10 1114 aaKnown RBP16.1■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Pdia3P27773 505 aaKnown RBP16.1■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Cst8P32766 142 aa16.1■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 RubcnlQ3TD16 648 aa16.1■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Cep131Q62036 1060 aa16.1■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Defa-rs10Q64263 91 aa16.1■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Gpbp1l1Q6NZP2 473 aa16.1■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Clca4aQ6Q473 924 aa16.1■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Cdkn2aipQ8BI72 563 aa16.1■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Terb1Q8C0V1 768 aa16.1■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Q8C5S3 137 aa16.1■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Smc5Q8CG46 1101 aaKnown RBP16.1■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Defb19Q8K3I8 83 aa16.1■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 1700006A11RikB9EHI3 544 aa16.09■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Mfap1aC0HKD8 439 aaKnown RBP16.09■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Mfap1bC0HKD9 439 aaKnown RBP16.09■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Stag2O35638 1231 aa16.09■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Muc1Q02496 630 aa16.09■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 C2cd5Q7TPS5 1016 aaKnown RBP16.09■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Rnf41Q8BH75 317 aa16.09■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Tdp1Q8BJ37 609 aa16.09■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Tcp11l1Q8BTG3 509 aa16.09■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Znf687Q9D2D7 1237 aa16.09■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Scnn1bQ9WU38 638 aa16.09■□□□□ 0.17
Ccdc58-201ENSMUST00000099937 Prr16A3KMN5 304 aa16.08■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms