RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 DeptorQ570Y9 409 aa13.05□□□□□ -0.32
Trim56-201ENSMUST00000054384 Kcnj14Q8JZN3 434 aa13.05□□□□□ -0.32
Trim56-201ENSMUST00000054384 Eya2O08575 532 aa13.05□□□□□ -0.32
Trim56-201ENSMUST00000054384 Tmod4Q9JLH8 345 aa13.05□□□□□ -0.32
Trim56-201ENSMUST00000054384 InhbaQ04998 424 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Itgb1bp2Q9R000 350 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Oxr1Q4KMM3 866 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Pnma5Q5DTT8 618 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Akap5D3YVF0 745 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Gm1661E9Q963 441 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Gimap9G3X987 291 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Pde11aP0C1Q2 933 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Ccdc50Q810U5 305 aaKnown RBP13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Ginm1Q91WR6 327 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Trappc8E9PWG2 1437 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Gm3415J3QMS8 315 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Znf667Q2TL60 609 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Armc2Q3URY6 854 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Nrbf2Q8VCQ3 287 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Gm3404Q9D506 307 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Iqcj-Schip1A0A088MLT8 559 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Cyp2j7A0A140T8U1 504 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 4933406M09RikG3XA12 479 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Schip1P0DPB4 484 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Prc1Q99K43 603 aaKnown RBP13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Abcc6Q9R1S7 1498 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Gm45015A0A140LII9 184 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 OtulinQ3UCV8 352 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Sh3gl3Q62421 347 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Cdk5rap3Q99LM2 503 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 EhhadhQ9DBM2 718 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Cfap74Q3UY96 1578 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Wdr36Q3TAQ9 899 aaKnown RBP13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Map3k12Q60700 888 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Rbm12b2Q66JV4 834 aaKnown RBP13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Rmi1Q9D4G9 616 aa13.04□□□□□ -0.32
Trim56-201ENSMUST00000054384 Slc13a1Q9JHI4 594 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Lekr1B2RVN1 116 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Ccdc169Q8BXX9 214 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Pcdha7Q91Y13 937 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Fmnl1Q9JL26 1094 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Frmpd1A2AKB4 1549 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Large2Q5XPT3 690 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Krt32Q62168 407 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Zfp91Q62511 572 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Ppp6r3Q922D4 844 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Ssh2Q5SW75 1423 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Tcp1P11983 556 aaKnown RBP13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Itih3Q61704 889 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Gpcpd1Q8C0L9 675 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Cog4Q8R1U1 785 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Card14Q99KF0 999 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Cyp27a1Q9DBG1 533 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 GfapP03995 430 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Nlrp4cQ3TKR3 982 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Lrrc8aQ80WG5 810 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Wdr46Q9Z0H1 622 aaKnown RBP13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Fyb2A2A995 729 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Ube3bQ9ES34 1070 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Slc17a8Q8BFU8 601 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Kif9Q9WV04 790 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Sgk1Q9WVC6 431 aa13.03□□□□□ -0.32
Trim56-201ENSMUST00000054384 Myo1fP70248 1099 aa13.02□□□□□ -0.32
Trim56-201ENSMUST00000054384 Agap2Q3UHD9 1186 aa13.02□□□□□ -0.32
Trim56-201ENSMUST00000054384 Col20a1Q923P0 1320 aa13.02□□□□□ -0.32
Trim56-201ENSMUST00000054384 NeblQ0II04 452 aa13.02□□□□□ -0.32
Trim56-201ENSMUST00000054384 Serpinb6eI7HJI3 429 aa13.02□□□□□ -0.32
Trim56-201ENSMUST00000054384 Atp6v1e1P50518 226 aa13.02□□□□□ -0.32
Trim56-201ENSMUST00000054384 Cyp24a1Q64441 514 aa13.02□□□□□ -0.32
Trim56-201ENSMUST00000054384 Fbxo41Q6NS60 873 aa13.02□□□□□ -0.32
Trim56-201ENSMUST00000054384 Nod2Q8K3Z0 1020 aa13.02□□□□□ -0.32
Trim56-201ENSMUST00000054384 Pdzd8B9EJ80 1147 aa13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Fkbp3Q62446 224 aaKnown RBP13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Efcab14Q8BGQ6 484 aa13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Kctd6Q8BNL5 237 aa13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Sytl1Q99N80 567 aa13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Eef1gQ9D8N0 437 aaKnown RBP13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Enc1O35709 589 aa13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Pfkfb1P70266 471 aa13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Dnajc10Q9DC23 793 aa13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 YwhagP61982 247 aaKnown RBP13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Bach2P97303 839 aa13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Prdm2A2A7B5 1709 aaKnown RBP13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 RubcnQ80U62 956 aa13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Cyp26b1Q811W2 512 aa13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Dync1i2O88487 612 aaKnown RBP13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 IvlP48997 467 aa13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Rhpn1Q61085 643 aa13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Fndc3aQ8BX90 1198 aa13.02□□□□□ -0.33
Trim56-201ENSMUST00000054384 Trpm2Q91YD4 1506 aa13.01□□□□□ -0.33
Trim56-201ENSMUST00000054384 TxlngQ8BHN1 524 aa13.01□□□□□ -0.33
Trim56-201ENSMUST00000054384 LratQ9JI60 231 aa13.01□□□□□ -0.33
Trim56-201ENSMUST00000054384 Pard3Q99NH2 1333 aa13.01□□□□□ -0.33
Trim56-201ENSMUST00000054384 Zfp174B9EJW5 407 aa13.01□□□□□ -0.33
Trim56-201ENSMUST00000054384 Stx1bP61264 288 aa13.01□□□□□ -0.33
Trim56-201ENSMUST00000054384 Nuak1Q641K5 658 aa13.01□□□□□ -0.33
Trim56-201ENSMUST00000054384 MefvQ9JJ26 767 aa13.01□□□□□ -0.33
Trim56-201ENSMUST00000054384 Ppp2r3dQ9Z176 491 aa13.01□□□□□ -0.33
Trim56-201ENSMUST00000054384 Cul4bA2A432 970 aaKnown RBP13.01□□□□□ -0.33
Trim56-201ENSMUST00000054384 Gna14P30677 355 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 54.2 ms