RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 EFCC1Q9HA90 598 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 XAB2Q9HCS7 855 aaKnown RBP10.03□□□□□ -0.8
CSMD1-218ENST00000635120 HIP1RO75146 1068 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 ADCY8P40145 1251 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 RPGRIP1Q96KN7 1286 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 METTL22Q9BUU2 404 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-218ENST00000635120 USH1CQ9Y6N9 552 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 GSTA1P08263 222 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 GSTA2P09210 222 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 CLTAP09496 248 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 PHLDB3Q6NSJ2 640 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 RIOK1Q9BRS2 568 aaKnown RBP10.03□□□□□ -0.8
CSMD1-218ENST00000635120 NUCKS1Q9H1E3 243 aaKnown RBP10.03□□□□□ -0.8
CSMD1-218ENST00000635120 GJA3Q9Y6H8 435 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 COL17A1Q9UMD9 1497 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-218ENST00000635120 EYA2O00167 538 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 GAS7O60861 476 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 PRPF6O94906 941 aaKnown RBP10.03□□□□□ -0.8
CSMD1-218ENST00000635120 BRDTQ58F21 947 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-218ENST00000635120 G2E3Q7L622 706 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 AZI2Q9H6S1 392 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 SUDS3Q9H7L9 328 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-218ENST00000635120 LMBRD1Q9NUN5 540 aa10.03□□□□□ -0.8
CSMD1-218ENST00000635120 SGSM2O43147 1006 aa10.02□□□□□ -0.8
CSMD1-218ENST00000635120 NR1I2O75469 434 aa10.02□□□□□ -0.8
CSMD1-218ENST00000635120 NONOQ15233 471 aaKnown RBP eCLIP10.02□□□□□ -0.8
CSMD1-218ENST00000635120 RBBP5Q15291 538 aaKnown RBP10.02□□□□□ -0.8
CSMD1-218ENST00000635120 GPBP1Q86WP2 473 aa10.02□□□□□ -0.8
CSMD1-218ENST00000635120 PALM2Q8IXS6 379 aa10.02□□□□□ -0.8
CSMD1-218ENST00000635120 STAG1Q8WVM7 1258 aa10.02□□□□□ -0.8
CSMD1-218ENST00000635120 TRIM58Q8NG06 486 aa10.02□□□□□ -0.8
CSMD1-218ENST00000635120 ST7Q9NRC1 585 aa10.02□□□□□ -0.8
CSMD1-218ENST00000635120 A2MP01023 1474 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 FRMD3A2A2Y4 597 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 GNA14O95837 355 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 IRX4P78413 519 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 TSC1Q92574 1164 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 TRIM4Q9C037 500 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 SH3TC1Q8TE82 1336 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 KDM3AQ9Y4C1 1321 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 DBNDD2Q9BQY9 259 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 MGEA5O60502 916 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 YWHAEP62258 255 aaKnown RBP10.02□□□□□ -0.81
CSMD1-218ENST00000635120 TRIM50Q86XT4 487 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 METTL13Q8N6R0 699 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 CAPN12Q6ZSI9 719 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 IQCDQ96DY2 449 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-218ENST00000635120 SERPINB6P35237 376 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 LIG3P49916 1009 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 DBN1Q16643 649 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 CABP7Q86V35 215 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 HVCN1Q96D96 273 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 CAPS2Q9BXY5 557 aa10.02□□□□□ -0.81
CSMD1-218ENST00000635120 PPFIA2O75334 1257 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 SPATA5Q8NB90 893 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 POMGNT1Q8WZA1 660 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 TCP10Q12799 353 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 SPDL1Q96EA4 605 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 GGA1Q9UJY5 639 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 TAF5LO75529 589 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 FAM71BQ8TC56 605 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 Q9H521 79 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 ZNF532Q9HCE3 1301 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 DKC1O60832 514 aaKnown RBP eCLIP10.01□□□□□ -0.812e-6■■■■■ 36
CSMD1-218ENST00000635120 CPXCR1Q8N123 301 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 SMIM24O75264 130 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 TRAPPC3LQ5T215 181 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 WHAMMQ8TF30 809 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 GOLGA8KD6RF30 607 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 POLD1P28340 1107 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 HIBADHP31937 336 aaKnown RBP10.01□□□□□ -0.81
CSMD1-218ENST00000635120 KMT5BQ4FZB7 885 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 CCDC51Q96ER9 411 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 HOMER3Q9NSC5 361 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 SNCBQ16143 134 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 RNF168Q8IYW5 571 aaPredicted RBP10.01□□□□□ -0.81
CSMD1-218ENST00000635120 RAB20Q9NX57 234 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 DNM2P50570 870 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 BIRC2Q13490 618 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 PPP2R5EQ16537 467 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 NBPF14Q5TI25 921 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 DCLK2Q8N568 766 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 PDZD8Q8NEN9 1154 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 TGFBRAP1Q8WUH2 860 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 MED4Q9NPJ6 270 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 SAT1P21673 171 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 TTC19Q6DKK2 380 aaPredicted RBP10.01□□□□□ -0.81
CSMD1-218ENST00000635120 PLBD2Q8NHP8 589 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 PDE11AQ9HCR9 933 aa10.01□□□□□ -0.81
CSMD1-218ENST00000635120 PFKFB1P16118 471 aa10□□□□□ -0.81
CSMD1-218ENST00000635120 CFBP00751 764 aa10□□□□□ -0.81
CSMD1-218ENST00000635120 KRT3P12035 628 aa10□□□□□ -0.81
CSMD1-218ENST00000635120 FAM102BQ5T8I3 360 aa10□□□□□ -0.81
CSMD1-218ENST00000635120 JADE1Q6IE81 842 aa10□□□□□ -0.81
CSMD1-218ENST00000635120 MAIP1Q8WWC4 291 aa10□□□□□ -0.81
CSMD1-218ENST00000635120 MED10Q9BTT4 135 aa10□□□□□ -0.81
CSMD1-218ENST00000635120 MRPL46Q9H2W6 279 aaKnown RBP10□□□□□ -0.81
CSMD1-218ENST00000635120 LUC7L3O95232 432 aaKnown RBP10□□□□□ -0.81
CSMD1-218ENST00000635120 STAT1P42224 750 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms