RNA–Protein interactions for RNA: ENST00000625837.2

DDX3X-215, Transcript of DEAD-box helicase 3 X-linked, human

TSL 5 BASIC

Gene DDX3X, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX3X-215	ENST00000625837	PHF20	Q9BVI0	1012 aa		12.04	□□□□□ -0.48
DDX3X-215	ENST00000625837	COA1	Q9GZY4	146 aa		12.04	□□□□□ -0.48
DDX3X-215	ENST00000625837	TMEM260	Q9NX78	707 aa		12.04	□□□□□ -0.48
DDX3X-215	ENST00000625837	FBXO2	Q9UK22	296 aa	Predicted RBP	12.04	□□□□□ -0.48
DDX3X-215	ENST00000625837	SSB	P05455	408 aa	Known RBP eCLIP	12.04	□□□□□ -0.48
DDX3X-215	ENST00000625837	HLA-DOA	P06340	250 aa		12.04	□□□□□ -0.48
DDX3X-215	ENST00000625837	PTPRE	P23469	700 aa		12.04	□□□□□ -0.48
DDX3X-215	ENST00000625837	UBASH3A	P57075	661 aa		12.04	□□□□□ -0.48
DDX3X-215	ENST00000625837	NLRP12	P59046	1061 aa		12.04	□□□□□ -0.48
DDX3X-215	ENST00000625837	SBK1	Q52WX2	424 aa		12.04	□□□□□ -0.48
DDX3X-215	ENST00000625837	RESP18	Q5W5W9	173 aa		12.04	□□□□□ -0.48
DDX3X-215	ENST00000625837	CDC42EP5	Q6NZY7	148 aa		12.04	□□□□□ -0.48
DDX3X-215	ENST00000625837	NUP88	Q99567	741 aa	Predicted RBP	12.04	□□□□□ -0.48
DDX3X-215	ENST00000625837	STK36	Q9NRP7	1315 aa		12.04	□□□□□ -0.48
DDX3X-215	ENST00000625837	ECE2	O60344	883 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	CRK	P46108	304 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	FUT2	Q10981	343 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	POTEA	Q6S8J7	498 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	CIC	Q96RK0	1608 aa	Predicted RBP	12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	UQCRHL	A0A096LP55	91 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	UQCRH	P07919	91 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	SKIL	P12757	684 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	IL1R1	P14778	569 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	UBA7	P41226	1012 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	TXK	P42681	527 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	PFKFB3	Q16875	520 aa	Predicted RBP	12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	DGKH	Q86XP1	1220 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	RRP36	Q96EU6	259 aa	Known RBP	12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	ZFP91	Q96JP5	570 aa	Predicted RBP	12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837		A0A087X0B3	334 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	UBE2S	Q16763	222 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	GPIHBP1	Q8IV16	184 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	LARGE2	Q8N3Y3	721 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	MAD2L2	Q9UI95	211 aa		12.03	□□□□□ -0.48
DDX3X-215	ENST00000625837	HOXA10	P31260	410 aa	Predicted RBP	12.02	□□□□□ -0.48
DDX3X-215	ENST00000625837	USH1G	Q495M9	461 aa		12.02	□□□□□ -0.48
DDX3X-215	ENST00000625837	MIGA2	Q7L4E1	593 aa		12.02	□□□□□ -0.48
DDX3X-215	ENST00000625837	CCDC84	Q86UT8	332 aa	Predicted RBP	12.02	□□□□□ -0.48
DDX3X-215	ENST00000625837	DPF2	Q92785	391 aa		12.02	□□□□□ -0.48
DDX3X-215	ENST00000625837	NFE2L3	Q9Y4A8	694 aa		12.02	□□□□□ -0.48
DDX3X-215	ENST00000625837	FANCC	Q00597	558 aa		12.02	□□□□□ -0.49
DDX3X-215	ENST00000625837	HS1BP3	Q53T59	392 aa		12.02	□□□□□ -0.49
DDX3X-215	ENST00000625837	RBM43	Q6ZSC3	357 aa	Known RBP	12.02	□□□□□ -0.49
DDX3X-215	ENST00000625837	CCDC34	Q96HJ3	373 aa		12.02	□□□□□ -0.49
DDX3X-215	ENST00000625837	OFD1	O75665	1012 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	TEC	P42680	631 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	PPP4C	P60510	307 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	PPP2R5B	Q15173	497 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	SRPRB	Q9Y5M8	271 aa	Known RBP	12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	SMTNL1	A8MU46	457 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	GNAQ	P50148	359 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	SLC35G1	Q2M3R5	365 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	TMEM60	Q9H2L4	133 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	SAMSN1	Q9NSI8	373 aa	Known RBP	12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	MKRN1	Q9UHC7	482 aa	Known RBP	12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	MAN1B1	Q9UKM7	699 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	C4B	P0C0L5	1744 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	DDTL	A6NHG4	134 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	TMEM232	C9JQI7	657 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	PC	P11498	1178 aa	Known RBP	12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	CALML3	P27482	149 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	TXLNA	P40222	546 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	STAT6	P42226	847 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	SLC15A2	Q16348	729 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	RRAGB	Q5VZM2	374 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	DTHD1	Q6ZMT9	781 aa		12.01	□□□□□ -0.49
DDX3X-215	ENST00000625837	TOP1	P11387	765 aa	Known RBP	12	□□□□□ -0.49
DDX3X-215	ENST00000625837	MYL5	Q02045	173 aa		12	□□□□□ -0.49
DDX3X-215	ENST00000625837	ZHX3	Q9H4I2	956 aa		12	□□□□□ -0.49
DDX3X-215	ENST00000625837	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	12	□□□□□ -0.49
DDX3X-215	ENST00000625837	CCT6A	P40227	531 aa	Known RBP	12	□□□□□ -0.49
DDX3X-215	ENST00000625837	RAD51AP2	Q09MP3	1159 aa		12	□□□□□ -0.49
DDX3X-215	ENST00000625837	SEPT2	Q15019	361 aa		12	□□□□□ -0.49
DDX3X-215	ENST00000625837	C16orf86	Q6ZW13	317 aa		12	□□□□□ -0.49
DDX3X-215	ENST00000625837	NEDD1	Q8NHV4	660 aa		12	□□□□□ -0.49
DDX3X-215	ENST00000625837	PCDHA4	Q9UN74	947 aa		12	□□□□□ -0.49
DDX3X-215	ENST00000625837	SFPQ	P23246	707 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	SLC1A4	P43007	532 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	FMR1	Q06787	632 aa	Known RBP eCLIP	11.99	□□□□□ -0.49	2e-7	■■□□□ 12.7
DDX3X-215	ENST00000625837	CERKL	Q49MI3	558 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	AKT1S1	Q96B36	256 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	USP17L10	C9JJH3	530 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	PLSCR1	O15162	318 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	IDE	P14735	1019 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	BMP6	P22004	513 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	GRM4	Q14833	912 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	PLA2G4D	Q86XP0	818 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	TBCK	Q8TEA7	893 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	PRMT6	Q96LA8	375 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	C6orf50	Q9HD87	102 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	PODXL2	Q9NZ53	605 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	HPSE	Q9Y251	543 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	IRS2	Q9Y4H2	1338 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	USP27X	A6NNY8	438 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	ZNF500	O60304	480 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	CUL4B	Q13620	913 aa		11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.99	□□□□□ -0.49
DDX3X-215	ENST00000625837	CCDC148	Q8NFR7	591 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms