RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 NELFCDQ8IXH7 590 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 SLFN12Q8IYM2 578 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 SPICE1Q8N0Z3 855 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 NAP1L3Q99457 506 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 NSRP1Q9H0G5 558 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 ADGBQ8N7X0 1667 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 USP17L3A6NCW0 530 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 USP17L4A6NCW7 530 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 C21orf2O43822 256 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 MYL5Q02045 173 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 IFRD2Q12894 506 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 ASIC2Q16515 512 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 USP17L1Q7RTZ2 530 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 GPR161Q8N6U8 529 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 ZBED2Q9BTP6 218 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 VPS54Q9P1Q0 977 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 MAPK8IP1Q9UQF2 711 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 PNMA6EA0A0J9YXQ4 647 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 PDE8BO95263 885 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 FOSP01100 380 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 ZSCAN20P17040 1043 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 ALDH3A1P30838 453 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 TNNC1P63316 161 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 RETREG2Q8NC44 543 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 TSGA10Q9BZW7 698 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 PFDN4Q9NQP4 134 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 RNF181Q9P0P0 153 aa10.85□□□□□ -0.67
CLTCL1-211ENST00000621271 CUTAO60888 179 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 ZBTB16Q05516 673 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 EXOC8Q8IYI6 725 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 AMNQ9BXJ7 453 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 HESX1Q9UBX0 185 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 PCDHA1Q9Y5I3 950 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 SETD1BQ9UPS6 1966 aaKnown RBP10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 FAM160A1Q05DH4 1040 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 KRT40Q6A162 431 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 SND1Q7KZF4 910 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 SPON1Q9HCB6 807 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 LRRIQ4A6NIV6 560 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 PPP2R5DQ14738 602 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 SMC6Q96SB8 1091 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 DHX36Q9H2U1 1008 aaKnown RBP10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 KCNJ14Q9UNX9 436 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 AKT3Q9Y243 479 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 PALLDQ8WX93 1383 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 NPC1L1Q9UHC9 1359 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 POLR2DO15514 142 aaKnown RBP10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 CSPG5O95196 566 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 ZNF365Q70YC5 407 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 APOL6Q9BWW8 343 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 PCDHA12Q9UN75 941 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 USTQ9Y2C2 406 aa10.84□□□□□ -0.67
CLTCL1-211ENST00000621271 IGSF3O75054 1194 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 TMEM191BP0C7N4 346 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 GPATCH4Q5T3I0 446 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 UBL4BQ8N7F7 174 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 RDH13Q8NBN7 331 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 GMNNO75496 209 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 PAK1Q13153 545 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 CEP128Q6ZU80 1094 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 PRPF31Q8WWY3 499 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 KANSL2Q9H9L4 492 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 CTTNBP2NLQ9P2B4 639 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 LARSQ9P2J5 1176 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 TYW5A2RUC4 315 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 GOLGA8HP0CJ92 632 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 DMP1Q13316 513 aaPredicted RBP10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 SEPT14Q6ZU15 432 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 ATP6V0A1Q93050 837 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 SGSM2O43147 1006 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 USP17L8P0C7I0 530 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 HOXD10P28358 340 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 KIF11P52732 1056 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 BRINP3Q76B58 766 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 MICAL1Q8TDZ2 1067 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 ERO1AQ96HE7 468 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 LMBRD1Q9NUN5 540 aa10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 SRP68Q9UHB9 627 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-211ENST00000621271 E7EWF7 191 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 TLR3O15455 904 aaKnown RBP10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 UAP1Q16222 522 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 GPBP1Q86WP2 473 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 CAPZA3Q96KX2 299 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 VPS16Q9H269 839 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 ZNF215Q9UL58 517 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 MAP3K4Q9Y6R4 1608 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 SPDYE16A6NNV3 312 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 GDF11O95390 407 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 PCP11498 1178 aaKnown RBP10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 MCM6Q14566 821 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 CLUL1Q15846 466 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 SPDYE2Q495Y8 402 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 LRRC24Q50LG9 513 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 BLIDQ8IZY5 108 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 CDHR1Q96JP9 859 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 IFNKQ9P0W0 207 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 TRIM35Q9UPQ4 493 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 TNKSO95271 1327 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 K7ENM7 598 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms